Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.75□□□□□ -1.49
VARSP26640 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
VARSP26640 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VARSP26640 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
VARSP26640 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
VARSP26640 RFX3-203ENST00000381984 364 ntTSL 3 BASIC5.75□□□□□ -1.49
VARSP26640 MIR521-1-201ENST00000384902 87 ntBASIC5.75□□□□□ -1.49
VARSP26640 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC5.75□□□□□ -1.49
VARSP26640 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VARSP26640 AL591043.1-201ENST00000432461 424 ntBASIC5.75□□□□□ -1.49
VARSP26640 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC5.75□□□□□ -1.49
VARSP26640 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC5.75□□□□□ -1.49
VARSP26640 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.75□□□□□ -1.49
VARSP26640 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VARSP26640 AL133445.1-201ENST00000467051 452 ntBASIC5.75□□□□□ -1.49
VARSP26640 RN7SL269P-201ENST00000467795 305 ntBASIC5.75□□□□□ -1.49
VARSP26640 RN7SL177P-201ENST00000476596 299 ntBASIC5.75□□□□□ -1.49
VARSP26640 RN7SL273P-201ENST00000481561 299 ntBASIC5.75□□□□□ -1.49
VARSP26640 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC5.75□□□□□ -1.49
VARSP26640 AC010186.2-204ENST00000537668 439 ntBASIC5.75□□□□□ -1.49
VARSP26640 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.75□□□□□ -1.49
VARSP26640 MIR3144-201ENST00000579460 79 ntBASIC5.75□□□□□ -1.49
VARSP26640 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.75□□□□□ -1.49
VARSP26640 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.75□□□□□ -1.49
VARSP26640 AC104465.1-201ENST00000611365 139 ntBASIC5.75□□□□□ -1.49
VARSP26640 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.75□□□□□ -1.49
VARSP26640 MIR6826-201ENST00000617808 98 ntBASIC5.75□□□□□ -1.49
VARSP26640 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
VARSP26640 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
VARSP26640 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.75□□□□□ -1.49
VARSP26640 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VARSP26640 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
VARSP26640 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
VARSP26640 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.75□□□□□ -1.49
VARSP26640 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VARSP26640 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
VARSP26640 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
VARSP26640 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.74□□□□□ -1.49
VARSP26640 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.74□□□□□ -1.49
VARSP26640 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
VARSP26640 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
VARSP26640 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC5.74□□□□□ -1.49
VARSP26640 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
VARSP26640 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
VARSP26640 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.74□□□□□ -1.49
VARSP26640 RPL9P7-201ENST00000330965 580 ntBASIC5.74□□□□□ -1.49
VARSP26640 SNORD113-8-201ENST00000363497 74 ntBASIC5.74□□□□□ -1.49
VARSP26640 RNA5SP211-201ENST00000365516 117 ntBASIC5.74□□□□□ -1.49
VARSP26640 RPS3AP2-201ENST00000407190 754 ntBASIC5.74□□□□□ -1.49
VARSP26640 RPL35AP3-201ENST00000414680 288 ntBASIC5.74□□□□□ -1.49
VARSP26640 EI24P1-201ENST00000416584 867 ntBASIC5.74□□□□□ -1.49
VARSP26640 AC079355.1-201ENST00000421770 223 ntBASIC5.74□□□□□ -1.49
VARSP26640 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC5.74□□□□□ -1.49
VARSP26640 TMEM167AP1-201ENST00000423409 219 ntBASIC5.74□□□□□ -1.49
VARSP26640 AL513043.1-201ENST00000439124 535 ntBASIC5.74□□□□□ -1.49
VARSP26640 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC5.74□□□□□ -1.49
VARSP26640 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.74□□□□□ -1.49
VARSP26640 AL596266.1-201ENST00000448132 400 ntBASIC5.74□□□□□ -1.49
VARSP26640 EIF4A1P11-201ENST00000451239 222 ntBASIC5.74□□□□□ -1.49
VARSP26640 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC5.74□□□□□ -1.49
VARSP26640 RN7SL72P-201ENST00000460697 269 ntBASIC5.74□□□□□ -1.49
VARSP26640 RPL9P9-202ENST00000466501 579 ntBASIC5.74□□□□□ -1.49
VARSP26640 MRPL42P6-201ENST00000486397 371 ntBASIC5.74□□□□□ -1.49
VARSP26640 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.74□□□□□ -1.49
VARSP26640 AL136038.1-201ENST00000497246 351 ntBASIC5.74□□□□□ -1.49
VARSP26640 RPL7P47-201ENST00000497299 556 ntBASIC5.74□□□□□ -1.49
VARSP26640 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.74□□□□□ -1.49
VARSP26640 AC027308.1-201ENST00000517993 110 ntBASIC5.74□□□□□ -1.49
VARSP26640 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.74□□□□□ -1.49
VARSP26640 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.74□□□□□ -1.49
VARSP26640 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.74□□□□□ -1.49
VARSP26640 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.74□□□□□ -1.49
VARSP26640 LRRC37A5P-203ENST00000580181 585 ntBASIC5.74□□□□□ -1.49
VARSP26640 AC006115.2-201ENST00000596823 202 ntBASIC5.74□□□□□ -1.49
VARSP26640 COX6CP7-201ENST00000597056 208 ntBASIC5.74□□□□□ -1.49
VARSP26640 Y_RNA.772-201ENST00000606692 102 ntBASIC5.74□□□□□ -1.49
VARSP26640 AL136228.1-201ENST00000622221 319 ntBASIC5.74□□□□□ -1.49
VARSP26640 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.74□□□□□ -1.49
VARSP26640 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.74□□□□□ -1.49
VARSP26640 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VARSP26640 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VARSP26640 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
VARSP26640 AC004076.2-201ENST00000620532 3323 ntBASIC5.74□□□□□ -1.49
VARSP26640 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VARSP26640 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VARSP26640 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VARSP26640 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
VARSP26640 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VARSP26640 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.73□□□□□ -1.49
VARSP26640 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
VARSP26640 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VARSP26640 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
VARSP26640 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
VARSP26640 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
VARSP26640 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
VARSP26640 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VARSP26640 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC5.73□□□□□ -1.49
VARSP26640 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VARSP26640 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
VARSP26640 Y_RNA.324-201ENST00000365165 102 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 151.6 ms