Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 AC025518.1-201ENST00000479856 347 ntBASIC3.75□□□□□ -1.81
BDNFP23560 AC093663.1-201ENST00000497190 394 ntBASIC3.75□□□□□ -1.81
BDNFP23560 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.75□□□□□ -1.81
BDNFP23560 AC114967.1-201ENST00000504890 259 ntBASIC3.75□□□□□ -1.81
BDNFP23560 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.75□□□□□ -1.81
BDNFP23560 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.75□□□□□ -1.81
BDNFP23560 PHBP14-201ENST00000512887 367 ntBASIC3.75□□□□□ -1.81
BDNFP23560 MTCYBP43-201ENST00000513621 740 ntBASIC3.75□□□□□ -1.81
BDNFP23560 RNU6-928P-201ENST00000516876 104 ntBASIC3.75□□□□□ -1.81
BDNFP23560 AL133271.1-201ENST00000538229 291 ntBASIC3.75□□□□□ -1.81
BDNFP23560 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.75□□□□□ -1.81
BDNFP23560 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.75□□□□□ -1.81
BDNFP23560 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC3.75□□□□□ -1.81
BDNFP23560 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.75□□□□□ -1.81
BDNFP23560 AL049838.1-201ENST00000563647 981 ntBASIC3.75□□□□□ -1.81
BDNFP23560 TPMTP1-201ENST00000592307 737 ntBASIC3.75□□□□□ -1.81
BDNFP23560 AC009974.1-201ENST00000608881 455 ntBASIC3.75□□□□□ -1.81
BDNFP23560 AC084757.4-201ENST00000616350 526 ntBASIC3.75□□□□□ -1.81
BDNFP23560 AC090617.7-201ENST00000623952 126 ntBASIC3.75□□□□□ -1.81
BDNFP23560 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.75□□□□□ -1.81
BDNFP23560 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
BDNFP23560 AC073073.2-201ENST00000609827 2578 ntBASIC3.74□□□□□ -1.81
BDNFP23560 AL049781.1-201ENST00000623195 3585 ntBASIC3.74□□□□□ -1.81
BDNFP23560 FRG1CP-201ENST00000358464 769 ntBASIC3.74□□□□□ -1.81
BDNFP23560 MIR208A-201ENST00000362287 71 ntBASIC3.74□□□□□ -1.81
BDNFP23560 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.74□□□□□ -1.81
BDNFP23560 AC110754.1-201ENST00000399740 601 ntBASIC3.74□□□□□ -1.81
BDNFP23560 RNU6-757P-201ENST00000410334 100 ntBASIC3.74□□□□□ -1.81
BDNFP23560 RNA5SP44-201ENST00000410446 133 ntBASIC3.74□□□□□ -1.81
BDNFP23560 RN7SKP140-201ENST00000411196 284 ntBASIC3.74□□□□□ -1.81
BDNFP23560 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.74□□□□□ -1.81
BDNFP23560 UBE2FP1-201ENST00000416536 447 ntBASIC3.74□□□□□ -1.81
BDNFP23560 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.74□□□□□ -1.81
BDNFP23560 AC092047.1-201ENST00000424997 240 ntBASIC3.74□□□□□ -1.81
BDNFP23560 AC002075.2-201ENST00000425207 252 ntBASIC3.74□□□□□ -1.81
BDNFP23560 ZNF863P-201ENST00000426746 417 ntBASIC3.74□□□□□ -1.81
BDNFP23560 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.74□□□□□ -1.81
BDNFP23560 AL159987.2-201ENST00000432754 307 ntBASIC3.74□□□□□ -1.81
BDNFP23560 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.74□□□□□ -1.81
BDNFP23560 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC3.74□□□□□ -1.81
BDNFP23560 AL049734.2-201ENST00000441066 616 ntBASIC3.74□□□□□ -1.81
BDNFP23560 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.74□□□□□ -1.81
BDNFP23560 AC135721.1-201ENST00000497954 479 ntBASIC3.74□□□□□ -1.81
BDNFP23560 LTV1P1-201ENST00000510683 1237 ntBASIC3.74□□□□□ -1.81
BDNFP23560 RNU5A-4P-201ENST00000516588 111 ntBASIC3.74□□□□□ -1.81
BDNFP23560 AC023050.2-201ENST00000544968 387 ntBASIC3.74□□□□□ -1.81
BDNFP23560 DUXAP1-201ENST00000556632 463 ntBASIC3.74□□□□□ -1.81
BDNFP23560 AC099489.2-201ENST00000574976 260 ntBASIC3.74□□□□□ -1.81
BDNFP23560 MIR3944-201ENST00000581277 108 ntBASIC3.74□□□□□ -1.81
BDNFP23560 BNIP3P39-201ENST00000601077 554 ntBASIC3.74□□□□□ -1.81
BDNFP23560 AC006557.5-201ENST00000603126 811 ntBASIC3.74□□□□□ -1.81
BDNFP23560 MIR7851-201ENST00000610611 160 ntBASIC3.74□□□□□ -1.81
BDNFP23560 AP003355.3-201ENST00000623465 114 ntBASIC3.74□□□□□ -1.81
BDNFP23560 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.74□□□□□ -1.81
BDNFP23560 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
BDNFP23560 AC138915.1-201ENST00000565427 1685 ntBASIC3.74□□□□□ -1.81
BDNFP23560 PCF11-AS1-201ENST00000602322 1516 ntBASIC3.74□□□□□ -1.81
BDNFP23560 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
BDNFP23560 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.73□□□□□ -1.81
BDNFP23560 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.73□□□□□ -1.81
BDNFP23560 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
BDNFP23560 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
BDNFP23560 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
BDNFP23560 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
BDNFP23560 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
BDNFP23560 RNA5SP50-201ENST00000363731 107 ntBASIC3.73□□□□□ -1.81
BDNFP23560 RNU6-931P-201ENST00000363850 107 ntBASIC3.73□□□□□ -1.81
BDNFP23560 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
BDNFP23560 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
BDNFP23560 RNU6-157P-201ENST00000383957 107 ntBASIC3.73□□□□□ -1.81
BDNFP23560 RNU6-723P-201ENST00000383973 107 ntBASIC3.73□□□□□ -1.81
BDNFP23560 MIR767-201ENST00000390228 109 ntBASIC3.73□□□□□ -1.81
BDNFP23560 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
BDNFP23560 RNU2-33P-201ENST00000410344 192 ntBASIC3.73□□□□□ -1.81
BDNFP23560 AL359704.1-201ENST00000411586 781 ntBASIC3.73□□□□□ -1.81
BDNFP23560 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
BDNFP23560 HMGN2P30-201ENST00000423237 256 ntBASIC3.73□□□□□ -1.81
BDNFP23560 USP12PX-201ENST00000432383 1057 ntBASIC3.73□□□□□ -1.81
BDNFP23560 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
BDNFP23560 HMGB3P11-201ENST00000440127 604 ntBASIC3.73□□□□□ -1.81
BDNFP23560 RBMY2UP-201ENST00000453474 324 ntBASIC3.73□□□□□ -1.81
BDNFP23560 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.73□□□□□ -1.81
BDNFP23560 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.73□□□□□ -1.81
BDNFP23560 AC104685.1-201ENST00000502445 371 ntBASIC3.73□□□□□ -1.81
BDNFP23560 RAC1P5-201ENST00000512182 576 ntBASIC3.73□□□□□ -1.81
BDNFP23560 RNU6-579P-201ENST00000516879 102 ntBASIC3.73□□□□□ -1.81
BDNFP23560 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC3.73□□□□□ -1.81
BDNFP23560 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.73□□□□□ -1.81
BDNFP23560 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.73□□□□□ -1.81
BDNFP23560 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.73□□□□□ -1.81
BDNFP23560 BNIP3P22-201ENST00000593399 556 ntBASIC3.73□□□□□ -1.81
BDNFP23560 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC3.73□□□□□ -1.81
BDNFP23560 AC103710.1-201ENST00000610003 901 ntBASIC3.73□□□□□ -1.81
BDNFP23560 AC110079.1-202ENST00000635213 138 ntBASIC3.73□□□□□ -1.81
BDNFP23560 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
BDNFP23560 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
BDNFP23560 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.73□□□□□ -1.81
BDNFP23560 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
BDNFP23560 RNU4-35P-201ENST00000362588 141 ntBASIC3.72□□□□□ -1.81
BDNFP23560 RNU6-777P-201ENST00000364265 104 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms