Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.86□□□□□ -1.79
TNFSF4P23510 RPL23AP20-201ENST00000447965 421 ntBASIC3.86□□□□□ -1.79
TNFSF4P23510 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.86□□□□□ -1.79
TNFSF4P23510 snoU13.1-201ENST00000459157 104 ntBASIC3.86□□□□□ -1.79
TNFSF4P23510 RPL38P1-201ENST00000460914 211 ntBASIC3.86□□□□□ -1.79
TNFSF4P23510 AC108751.2-201ENST00000469993 231 ntBASIC3.86□□□□□ -1.79
TNFSF4P23510 AC006463.2-201ENST00000473326 348 ntBASIC3.86□□□□□ -1.79
TNFSF4P23510 RPS3AP14-201ENST00000483907 780 ntBASIC3.86□□□□□ -1.79
TNFSF4P23510 DEFB109F-201ENST00000491870 277 ntBASIC3.86□□□□□ -1.79
TNFSF4P23510 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.86□□□□□ -1.79
TNFSF4P23510 RNU6-677P-201ENST00000516914 101 ntBASIC3.86□□□□□ -1.79
TNFSF4P23510 RN7SKP60-201ENST00000516985 239 ntBASIC3.86□□□□□ -1.79
TNFSF4P23510 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.86□□□□□ -1.79
TNFSF4P23510 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.86□□□□□ -1.79
TNFSF4P23510 AP001646.1-201ENST00000527936 915 ntBASIC3.86□□□□□ -1.79
TNFSF4P23510 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC3.86□□□□□ -1.79
TNFSF4P23510 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.86□□□□□ -1.79
TNFSF4P23510 AC105129.1-201ENST00000560250 297 ntBASIC3.86□□□□□ -1.79
TNFSF4P23510 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.86□□□□□ -1.79
TNFSF4P23510 HMGB1P6-201ENST00000569046 646 ntBASIC3.86□□□□□ -1.79
TNFSF4P23510 AC015912.2-201ENST00000571053 181 ntBASIC3.86□□□□□ -1.79
TNFSF4P23510 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC3.86□□□□□ -1.79
TNFSF4P23510 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.86□□□□□ -1.79
TNFSF4P23510 AC004492.1-201ENST00000607036 742 ntBASIC3.86□□□□□ -1.79
TNFSF4P23510 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.86□□□□□ -1.79
TNFSF4P23510 AC017083.3-201ENST00000609955 700 ntBASIC3.86□□□□□ -1.79
TNFSF4P23510 AL136295.6-201ENST00000610486 658 ntBASIC3.86□□□□□ -1.79
TNFSF4P23510 CR381653.2-201ENST00000624041 768 ntBASIC3.86□□□□□ -1.79
TNFSF4P23510 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
TNFSF4P23510 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
TNFSF4P23510 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TNFSF4P23510 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TNFSF4P23510 MTND4P5-201ENST00000435821 1374 ntBASIC3.86□□□□□ -1.79
TNFSF4P23510 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
TNFSF4P23510 MAPK10-372ENST00000641954 3413 ntBASIC3.86□□□□□ -1.79
TNFSF4P23510 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.86□□□□□ -1.79
TNFSF4P23510 AC066616.2-201ENST00000559334 1481 ntBASIC3.86□□□□□ -1.79
TNFSF4P23510 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TNFSF4P23510 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TNFSF4P23510 AC027514.1-201ENST00000588561 1603 ntBASIC3.85□□□□□ -1.79
TNFSF4P23510 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TNFSF4P23510 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TNFSF4P23510 AC021146.4-201ENST00000309229 279 ntBASIC3.85□□□□□ -1.79
TNFSF4P23510 RNA5SP52-201ENST00000362448 134 ntBASIC3.85□□□□□ -1.79
TNFSF4P23510 RNU6-179P-201ENST00000363350 107 ntBASIC3.85□□□□□ -1.79
TNFSF4P23510 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TNFSF4P23510 MIR1-2-201ENST00000384961 85 ntBASIC3.85□□□□□ -1.79
TNFSF4P23510 MIR454-201ENST00000390180 115 ntBASIC3.85□□□□□ -1.79
TNFSF4P23510 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
TNFSF4P23510 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
TNFSF4P23510 Y_RNA.599-201ENST00000410489 109 ntBASIC3.85□□□□□ -1.79
TNFSF4P23510 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TNFSF4P23510 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC3.85□□□□□ -1.79
TNFSF4P23510 ISCA1P1-201ENST00000426679 387 ntBASIC3.85□□□□□ -1.79
TNFSF4P23510 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.85□□□□□ -1.79
TNFSF4P23510 AL132765.1-201ENST00000434165 553 ntBASIC3.85□□□□□ -1.79
TNFSF4P23510 MTATP6P16-201ENST00000434543 526 ntBASIC3.85□□□□□ -1.79
TNFSF4P23510 SNRPEP4-201ENST00000435815 279 ntBASIC3.85□□□□□ -1.79
TNFSF4P23510 AF228730.2-201ENST00000438784 848 ntBASIC3.85□□□□□ -1.79
TNFSF4P23510 AL356535.1-201ENST00000440335 398 ntBASIC3.85□□□□□ -1.79
TNFSF4P23510 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC3.85□□□□□ -1.79
TNFSF4P23510 AC012671.1-201ENST00000451912 203 ntBASIC3.85□□□□□ -1.79
TNFSF4P23510 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.85□□□□□ -1.79
TNFSF4P23510 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.85□□□□□ -1.79
TNFSF4P23510 KRTAP5-14P-201ENST00000502328 121 ntBASIC3.85□□□□□ -1.79
TNFSF4P23510 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.85□□□□□ -1.79
TNFSF4P23510 TTC39CP1-201ENST00000512513 755 ntBASIC3.85□□□□□ -1.79
TNFSF4P23510 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.85□□□□□ -1.79
TNFSF4P23510 TRAV28-201ENST00000557548 323 ntBASIC3.85□□□□□ -1.79
TNFSF4P23510 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC3.85□□□□□ -1.79
TNFSF4P23510 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.85□□□□□ -1.79
TNFSF4P23510 AC034105.3-201ENST00000565294 442 ntBASIC3.85□□□□□ -1.79
TNFSF4P23510 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.85□□□□□ -1.79
TNFSF4P23510 BPIFA4P-203ENST00000603168 689 ntBASIC3.85□□□□□ -1.79
TNFSF4P23510 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.85□□□□□ -1.79
TNFSF4P23510 AC091905.2-201ENST00000623143 306 ntBASIC3.85□□□□□ -1.79
TNFSF4P23510 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TNFSF4P23510 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.85□□□□□ -1.79
TNFSF4P23510 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
TNFSF4P23510 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.85□□□□□ -1.79
TNFSF4P23510 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.85□□□□□ -1.79
TNFSF4P23510 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC3.85□□□□□ -1.79
TNFSF4P23510 TPTE2P4-201ENST00000258589 1605 ntBASIC3.84□□□□□ -1.79
TNFSF4P23510 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TNFSF4P23510 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.84□□□□□ -1.79
TNFSF4P23510 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
TNFSF4P23510 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TNFSF4P23510 SNORD6-201ENST00000365444 73 ntBASIC3.84□□□□□ -1.79
TNFSF4P23510 RNU4-48P-201ENST00000365559 182 ntBASIC3.84□□□□□ -1.79
TNFSF4P23510 RNU6-606P-201ENST00000384721 111 ntBASIC3.84□□□□□ -1.79
TNFSF4P23510 MIR129-1-201ENST00000384972 72 ntBASIC3.84□□□□□ -1.79
TNFSF4P23510 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
TNFSF4P23510 RNA5SP332-201ENST00000391063 115 ntBASIC3.84□□□□□ -1.79
TNFSF4P23510 RNU6-648P-201ENST00000410190 107 ntBASIC3.84□□□□□ -1.79
TNFSF4P23510 RNU6-387P-201ENST00000411331 105 ntBASIC3.84□□□□□ -1.79
TNFSF4P23510 RPS3AP44-201ENST00000425466 790 ntBASIC3.84□□□□□ -1.79
TNFSF4P23510 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TNFSF4P23510 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.84□□□□□ -1.79
TNFSF4P23510 AC011753.3-201ENST00000443436 406 ntBASIC3.84□□□□□ -1.79
TNFSF4P23510 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms