Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.29
CD44P16070 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
CD44P16070 RNU6-1048P-201ENST00000364054 107 ntBASIC6.96□□□□□ -1.3
CD44P16070 MIR301A-201ENST00000385261 86 ntBASIC6.96□□□□□ -1.3
CD44P16070 RNA5SP231-201ENST00000410496 138 ntBASIC6.96□□□□□ -1.3
CD44P16070 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC6.96□□□□□ -1.3
CD44P16070 RPL30P3-201ENST00000424262 333 ntBASIC6.96□□□□□ -1.3
CD44P16070 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CD44P16070 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.96□□□□□ -1.3
CD44P16070 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC6.96□□□□□ -1.3
CD44P16070 AC010469.1-201ENST00000463864 576 ntBASIC6.96□□□□□ -1.3
CD44P16070 RNA5SP418-201ENST00000515951 117 ntBASIC6.96□□□□□ -1.3
CD44P16070 RPL23AP53-201ENST00000521854 457 ntBASIC6.96□□□□□ -1.3
CD44P16070 GSTP1P1-201ENST00000548078 319 ntBASIC6.96□□□□□ -1.3
CD44P16070 ZNF192P1-203ENST00000565888 810 ntBASIC6.96□□□□□ -1.3
CD44P16070 AC120024.3-201ENST00000603167 156 ntBASIC6.96□□□□□ -1.3
CD44P16070 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CD44P16070 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
CD44P16070 MTND5P18-201ENST00000445624 1801 ntBASIC6.96□□□□□ -1.3
CD44P16070 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC6.96□□□□□ -1.3
CD44P16070 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.96□□□□□ -1.3
CD44P16070 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CD44P16070 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CD44P16070 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
CD44P16070 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
CD44P16070 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.95□□□□□ -1.3
CD44P16070 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.95□□□□□ -1.3
CD44P16070 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CD44P16070 RNU6-137P-201ENST00000363680 108 ntBASIC6.95□□□□□ -1.3
CD44P16070 Y_RNA.329-201ENST00000365209 107 ntBASIC6.95□□□□□ -1.3
CD44P16070 RNY3P5-201ENST00000384127 102 ntBASIC6.95□□□□□ -1.3
CD44P16070 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC6.95□□□□□ -1.3
CD44P16070 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC6.95□□□□□ -1.3
CD44P16070 RNU6-625P-201ENST00000459412 107 ntBASIC6.95□□□□□ -1.3
CD44P16070 RN7SL585P-201ENST00000470538 280 ntBASIC6.95□□□□□ -1.3
CD44P16070 CREM-238ENST00000488741 651 ntTSL 2 BASIC6.95□□□□□ -1.3
CD44P16070 MRPS36P2-201ENST00000512569 299 ntBASIC6.95□□□□□ -1.3
CD44P16070 RNA5SP490-201ENST00000517141 136 ntBASIC6.95□□□□□ -1.3
CD44P16070 AC136628.3-201ENST00000521868 290 ntBASIC6.95□□□□□ -1.3
CD44P16070 AC007494.1-201ENST00000562293 760 ntBASIC6.95□□□□□ -1.3
CD44P16070 MIR3159-201ENST00000584572 74 ntBASIC6.95□□□□□ -1.3
CD44P16070 RNU6-84P-201ENST00000607737 102 ntBASIC6.95□□□□□ -1.3
CD44P16070 PSMD5-AS1-215ENST00000640622 205 ntBASIC6.95□□□□□ -1.3
CD44P16070 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CD44P16070 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
CD44P16070 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
CD44P16070 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC6.95□□□□□ -1.3
CD44P16070 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CD44P16070 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.95□□□□□ -1.3
CD44P16070 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
CD44P16070 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CD44P16070 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
CD44P16070 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
CD44P16070 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.94□□□□□ -1.3
CD44P16070 AC123769.1-201ENST00000530992 3192 ntBASIC6.94□□□□□ -1.3
CD44P16070 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
CD44P16070 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.94□□□□□ -1.3
CD44P16070 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
CD44P16070 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CD44P16070 RNA5SP52-201ENST00000362448 134 ntBASIC6.94□□□□□ -1.3
CD44P16070 RNA5SP391-201ENST00000363456 119 ntBASIC6.94□□□□□ -1.3
CD44P16070 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
CD44P16070 RNU6-1113P-201ENST00000384348 107 ntBASIC6.94□□□□□ -1.3
CD44P16070 MIR526A2-201ENST00000390198 65 ntBASIC6.94□□□□□ -1.3
CD44P16070 ARSFP1-201ENST00000398758 477 ntBASIC6.94□□□□□ -1.3
CD44P16070 EIF4EBP2P3-201ENST00000403144 334 ntBASIC6.94□□□□□ -1.3
CD44P16070 AL033519.1-201ENST00000407266 307 ntBASIC6.94□□□□□ -1.3
CD44P16070 RNU2-54P-201ENST00000410299 190 ntBASIC6.94□□□□□ -1.3
CD44P16070 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC6.94□□□□□ -1.3
CD44P16070 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.94□□□□□ -1.3
CD44P16070 RPL21P6-201ENST00000479171 504 ntBASIC6.94□□□□□ -1.3
CD44P16070 RN7SL413P-201ENST00000482700 297 ntBASIC6.94□□□□□ -1.3
CD44P16070 RN7SL714P-201ENST00000487050 298 ntBASIC6.94□□□□□ -1.3
CD44P16070 AC004980.4-201ENST00000513375 203 ntBASIC6.94□□□□□ -1.3
CD44P16070 AC008489.1-201ENST00000524271 483 ntBASIC6.94□□□□□ -1.3
CD44P16070 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC6.94□□□□□ -1.3
CD44P16070 AC123786.2-201ENST00000603459 275 ntBASIC6.94□□□□□ -1.3
CD44P16070 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.94□□□□□ -1.3
CD44P16070 MIR6070-201ENST00000613967 103 ntBASIC6.94□□□□□ -1.3
CD44P16070 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC6.94□□□□□ -1.3
CD44P16070 MIR7159-201ENST00000620587 66 ntBASIC6.94□□□□□ -1.3
CD44P16070 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
CD44P16070 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC6.94□□□□□ -1.3
CD44P16070 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
CD44P16070 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC6.94□□□□□ -1.3
CD44P16070 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CD44P16070 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CD44P16070 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CD44P16070 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.94□□□□□ -1.3
CD44P16070 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC6.94□□□□□ -1.3
CD44P16070 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CD44P16070 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.94□□□□□ -1.3
CD44P16070 AP003486.1-201ENST00000525716 3994 ntBASIC6.93□□□□□ -1.3
CD44P16070 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CD44P16070 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.93□□□□□ -1.3
CD44P16070 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CD44P16070 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CD44P16070 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
CD44P16070 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CD44P16070 ZNF658B-201ENST00000602828 3408 ntBASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 136.9 ms