Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 AC009902.3-201ENST00000606235 2172 ntBASIC4.18□□□□□ -1.74
RHOP08100 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
RHOP08100 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.18□□□□□ -1.74
RHOP08100 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
RHOP08100 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
RHOP08100 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.18□□□□□ -1.74
RHOP08100 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.18□□□□□ -1.74
RHOP08100 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
RHOP08100 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
RHOP08100 MTND4P12-201ENST00000498999 1377 ntBASIC4.17□□□□□ -1.74
RHOP08100 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
RHOP08100 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
RHOP08100 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.17□□□□□ -1.74
RHOP08100 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.17□□□□□ -1.74
RHOP08100 AC011460.1-201ENST00000636268 1834 ntBASIC4.17□□□□□ -1.74
RHOP08100 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
RHOP08100 RNU6-108P-201ENST00000365558 107 ntBASIC4.17□□□□□ -1.74
RHOP08100 SNORA20.2-201ENST00000383922 131 ntBASIC4.17□□□□□ -1.74
RHOP08100 AL356776.1-201ENST00000406574 447 ntBASIC4.17□□□□□ -1.74
RHOP08100 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.17□□□□□ -1.74
RHOP08100 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC4.17□□□□□ -1.74
RHOP08100 RWDD4P2-201ENST00000426392 563 ntBASIC4.17□□□□□ -1.74
RHOP08100 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC4.17□□□□□ -1.74
RHOP08100 AC098614.3-201ENST00000438957 440 ntBASIC4.17□□□□□ -1.74
RHOP08100 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.17□□□□□ -1.74
RHOP08100 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC4.17□□□□□ -1.74
RHOP08100 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.17□□□□□ -1.74
RHOP08100 FDX1P2-201ENST00000450769 375 ntBASIC4.17□□□□□ -1.74
RHOP08100 AC104308.1-201ENST00000454621 333 ntBASIC4.17□□□□□ -1.74
RHOP08100 MTND1P11-201ENST00000456661 876 ntBASIC4.17□□□□□ -1.74
RHOP08100 PPIAP15-201ENST00000479662 484 ntBASIC4.17□□□□□ -1.74
RHOP08100 AC055855.1-201ENST00000489563 579 ntBASIC4.17□□□□□ -1.74
RHOP08100 AC091951.2-201ENST00000500762 203 ntBASIC4.17□□□□□ -1.74
RHOP08100 AC008628.2-201ENST00000502605 298 ntBASIC4.17□□□□□ -1.74
RHOP08100 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.17□□□□□ -1.74
RHOP08100 RNU6-352P-201ENST00000516908 107 ntBASIC4.17□□□□□ -1.74
RHOP08100 AC022616.3-201ENST00000523940 148 ntBASIC4.17□□□□□ -1.74
RHOP08100 AP003497.1-201ENST00000528472 562 ntBASIC4.17□□□□□ -1.74
RHOP08100 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC4.17□□□□□ -1.74
RHOP08100 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.17□□□□□ -1.74
RHOP08100 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC4.17□□□□□ -1.74
RHOP08100 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.17□□□□□ -1.74
RHOP08100 MIR3944-201ENST00000581277 108 ntBASIC4.17□□□□□ -1.74
RHOP08100 AL117336.2-201ENST00000602435 335 ntBASIC4.17□□□□□ -1.74
RHOP08100 AL356055.1-201ENST00000602528 446 ntBASIC4.17□□□□□ -1.74
RHOP08100 AC010680.3-201ENST00000604215 520 ntBASIC4.17□□□□□ -1.74
RHOP08100 AL035413.2-201ENST00000604801 525 ntBASIC4.17□□□□□ -1.74
RHOP08100 AL009028.1-201ENST00000604895 802 ntBASIC4.17□□□□□ -1.74
RHOP08100 AC010680.4-201ENST00000605334 543 ntBASIC4.17□□□□□ -1.74
RHOP08100 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
RHOP08100 AL356585.4-201ENST00000623078 1229 ntBASIC4.17□□□□□ -1.74
RHOP08100 MIR3662-201ENST00000637030 95 ntBASIC4.17□□□□□ -1.74
RHOP08100 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RHOP08100 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RHOP08100 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RHOP08100 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
RHOP08100 ZNF33CP-201ENST00000432492 2030 ntBASIC4.17□□□□□ -1.74
RHOP08100 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
RHOP08100 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RHOP08100 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.17□□□□□ -1.74
RHOP08100 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.17□□□□□ -1.74
RHOP08100 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
RHOP08100 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.16□□□□□ -1.74
RHOP08100 RNU6-97P-201ENST00000363387 104 ntBASIC4.16□□□□□ -1.74
RHOP08100 Y_RNA.160-201ENST00000363677 92 ntBASIC4.16□□□□□ -1.74
RHOP08100 RNY3P3-201ENST00000363816 102 ntBASIC4.16□□□□□ -1.74
RHOP08100 RNU6-169P-201ENST00000365336 107 ntBASIC4.16□□□□□ -1.74
RHOP08100 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
RHOP08100 RNU6-1009P-201ENST00000390996 107 ntBASIC4.16□□□□□ -1.74
RHOP08100 RPL7P60-201ENST00000397636 735 ntBASIC4.16□□□□□ -1.74
RHOP08100 RNA5SP118-201ENST00000410385 109 ntBASIC4.16□□□□□ -1.74
RHOP08100 AC004987.3-201ENST00000413879 771 ntBASIC4.16□□□□□ -1.74
RHOP08100 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.16□□□□□ -1.74
RHOP08100 RPS15AP40-201ENST00000419621 391 ntBASIC4.16□□□□□ -1.74
RHOP08100 AC092832.1-201ENST00000422934 400 ntBASIC4.16□□□□□ -1.74
RHOP08100 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.16□□□□□ -1.74
RHOP08100 YME1L1P1-201ENST00000429435 297 ntBASIC4.16□□□□□ -1.74
RHOP08100 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC4.16□□□□□ -1.74
RHOP08100 ELOCP23-201ENST00000452014 332 ntBASIC4.16□□□□□ -1.74
RHOP08100 AMD1P1-201ENST00000457220 922 ntBASIC4.16□□□□□ -1.74
RHOP08100 OR5H5P-201ENST00000503164 928 ntBASIC4.16□□□□□ -1.74
RHOP08100 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.16□□□□□ -1.74
RHOP08100 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.16□□□□□ -1.74
RHOP08100 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC4.16□□□□□ -1.74
RHOP08100 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC4.16□□□□□ -1.74
RHOP08100 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.16□□□□□ -1.74
RHOP08100 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC4.16□□□□□ -1.74
RHOP08100 DEFB109D-201ENST00000529497 240 ntBASIC4.16□□□□□ -1.74
RHOP08100 AP000907.2-201ENST00000530827 353 ntBASIC4.16□□□□□ -1.74
RHOP08100 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.16□□□□□ -1.74
RHOP08100 AC024224.1-201ENST00000538284 609 ntBASIC4.16□□□□□ -1.74
RHOP08100 YPEL5P3-201ENST00000547227 352 ntBASIC4.16□□□□□ -1.74
RHOP08100 AC007566.2-201ENST00000603642 413 ntBASIC4.16□□□□□ -1.74
RHOP08100 MIR432-201ENST00000606207 94 ntBASIC4.16□□□□□ -1.74
RHOP08100 AC064801.1-201ENST00000612025 407 ntBASIC4.16□□□□□ -1.74
RHOP08100 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.16□□□□□ -1.74
RHOP08100 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.16□□□□□ -1.74
RHOP08100 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.16□□□□□ -1.74
RHOP08100 AL136964.1-201ENST00000622038 2990 ntBASIC4.16□□□□□ -1.74
RHOP08100 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms