Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2.43□□□□□ -2.02
APOEP02649 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
APOEP02649 RNA5SP27-201ENST00000363839 119 ntBASIC2.43□□□□□ -2.02
APOEP02649 RNU1-51P-201ENST00000365345 176 ntBASIC2.43□□□□□ -2.02
APOEP02649 RNU4-53P-201ENST00000410828 140 ntBASIC2.43□□□□□ -2.02
APOEP02649 MORF4L1P6-201ENST00000418771 268 ntBASIC2.43□□□□□ -2.02
APOEP02649 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.43□□□□□ -2.02
APOEP02649 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
APOEP02649 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.43□□□□□ -2.02
APOEP02649 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC2.43□□□□□ -2.02
APOEP02649 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.43□□□□□ -2.02
APOEP02649 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.43□□□□□ -2.02
APOEP02649 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC2.43□□□□□ -2.02
APOEP02649 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC2.43□□□□□ -2.02
APOEP02649 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.43□□□□□ -2.02
APOEP02649 HGF-207ENST00000453018 721 ntTSL 3 BASIC2.43□□□□□ -2.02
APOEP02649 AC128713.1-201ENST00000471495 306 ntBASIC2.43□□□□□ -2.02
APOEP02649 AC114322.1-201ENST00000506771 926 ntBASIC2.43□□□□□ -2.02
APOEP02649 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
APOEP02649 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
APOEP02649 MTCO1P47-201ENST00000523889 1271 ntBASIC2.43□□□□□ -2.02
APOEP02649 OR8K4P-201ENST00000534608 872 ntBASIC2.43□□□□□ -2.02
APOEP02649 AL512310.1-201ENST00000548639 172 ntBASIC2.43□□□□□ -2.02
APOEP02649 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC2.43□□□□□ -2.02
APOEP02649 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC2.43□□□□□ -2.02
APOEP02649 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.43□□□□□ -2.02
APOEP02649 FRG1HP-204ENST00000617940 757 ntBASIC2.43□□□□□ -2.02
APOEP02649 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC2.43□□□□□ -2.02
APOEP02649 AC009159.1-201ENST00000618386 642 ntBASIC2.43□□□□□ -2.02
APOEP02649 AC079597.1-201ENST00000624306 508 ntBASIC2.43□□□□□ -2.02
APOEP02649 MFSD8-245ENST00000641743 948 ntBASIC2.43□□□□□ -2.02
APOEP02649 MTCO1P18-201ENST00000455518 1419 ntBASIC2.42□□□□□ -2.02
APOEP02649 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.42□□□□□ -2.02
APOEP02649 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.42□□□□□ -2.02
APOEP02649 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
APOEP02649 XGY1-201ENST00000381172 446 ntBASIC2.42□□□□□ -2.02
APOEP02649 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
APOEP02649 RNU6-1005P-201ENST00000384519 107 ntBASIC2.42□□□□□ -2.02
APOEP02649 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.42□□□□□ -2.02
APOEP02649 AC107081.1-201ENST00000414975 361 ntBASIC2.42□□□□□ -2.02
APOEP02649 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
APOEP02649 TPTE2P1-204ENST00000435256 593 ntBASIC2.42□□□□□ -2.02
APOEP02649 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.42□□□□□ -2.02
APOEP02649 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.42□□□□□ -2.02
APOEP02649 BX248409.1-201ENST00000455497 255 ntBASIC2.42□□□□□ -2.02
APOEP02649 RPS20P24-201ENST00000457473 361 ntBASIC2.42□□□□□ -2.02
APOEP02649 RPL23AP70-201ENST00000483361 460 ntBASIC2.42□□□□□ -2.02
APOEP02649 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.42□□□□□ -2.02
APOEP02649 AC025768.1-201ENST00000510057 267 ntBASIC2.42□□□□□ -2.02
APOEP02649 AC008413.1-201ENST00000511864 177 ntBASIC2.42□□□□□ -2.02
APOEP02649 SNORA70.16-201ENST00000516390 95 ntBASIC2.42□□□□□ -2.02
APOEP02649 AC087241.2-201ENST00000535801 324 ntBASIC2.42□□□□□ -2.02
APOEP02649 TRAV11-201ENST00000539512 339 ntBASIC2.42□□□□□ -2.02
APOEP02649 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
APOEP02649 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
APOEP02649 AC074051.3-201ENST00000570238 358 ntBASIC2.42□□□□□ -2.02
APOEP02649 ISCA1P3-201ENST00000577104 373 ntBASIC2.42□□□□□ -2.02
APOEP02649 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.42□□□□□ -2.02
APOEP02649 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.42□□□□□ -2.02
APOEP02649 AC090616.3-201ENST00000582184 217 ntBASIC2.42□□□□□ -2.02
APOEP02649 AC079089.3-201ENST00000603094 673 ntBASIC2.42□□□□□ -2.02
APOEP02649 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC2.42□□□□□ -2.02
APOEP02649 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC2.42□□□□□ -2.02
APOEP02649 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
APOEP02649 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.41□□□□□ -2.02
APOEP02649 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC2.41□□□□□ -2.02
APOEP02649 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.41□□□□□ -2.02
APOEP02649 AL035407.1-201ENST00000429211 571 ntBASIC2.41□□□□□ -2.02
APOEP02649 AC009296.1-201ENST00000443146 155 ntBASIC2.41□□□□□ -2.02
APOEP02649 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.41□□□□□ -2.02
APOEP02649 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC2.41□□□□□ -2.02
APOEP02649 HMGN3P1-201ENST00000453847 193 ntBASIC2.41□□□□□ -2.02
APOEP02649 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.41□□□□□ -2.02
APOEP02649 PABPC1P3-201ENST00000469174 459 ntBASIC2.41□□□□□ -2.02
APOEP02649 VPS26AP1-201ENST00000483197 979 ntBASIC2.41□□□□□ -2.02
APOEP02649 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.41□□□□□ -2.02
APOEP02649 AC104108.1-201ENST00000509930 412 ntBASIC2.41□□□□□ -2.02
APOEP02649 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.41□□□□□ -2.02
APOEP02649 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.41□□□□□ -2.02
APOEP02649 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.41□□□□□ -2.02
APOEP02649 RNA5SP281-201ENST00000516504 135 ntBASIC2.41□□□□□ -2.02
APOEP02649 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.41□□□□□ -2.02
APOEP02649 OR4R2P-201ENST00000530815 597 ntBASIC2.41□□□□□ -2.02
APOEP02649 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC2.41□□□□□ -2.02
APOEP02649 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.41□□□□□ -2.02
APOEP02649 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.41□□□□□ -2.02
APOEP02649 MIR5007-201ENST00000583098 95 ntBASIC2.41□□□□□ -2.02
APOEP02649 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.41□□□□□ -2.02
APOEP02649 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
APOEP02649 ELF2P3-201ENST00000445099 1506 ntBASIC2.41□□□□□ -2.02
APOEP02649 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.41□□□□□ -2.02
APOEP02649 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.41□□□□□ -2.02
APOEP02649 AC007342.9-201ENST00000623877 1385 ntBASIC2.4□□□□□ -2.02
APOEP02649 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
APOEP02649 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
APOEP02649 SNORD82-201ENST00000365530 70 ntBASIC2.4□□□□□ -2.03
APOEP02649 SET-203ENST00000372688 801 ntTSL 2 BASIC2.4□□□□□ -2.03
APOEP02649 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
APOEP02649 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
APOEP02649 U3.37-201ENST00000408528 213 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms