Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.07□□□□□ -1.76
TOP3BO95985 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TOP3BO95985 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
TOP3BO95985 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
TOP3BO95985 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TOP3BO95985 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.06□□□□□ -1.76
TOP3BO95985 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.06□□□□□ -1.76
TOP3BO95985 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TOP3BO95985 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
TOP3BO95985 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TOP3BO95985 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TOP3BO95985 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TOP3BO95985 Y_RNA.160-201ENST00000363677 92 ntBASIC4.06□□□□□ -1.76
TOP3BO95985 RNU6-777P-201ENST00000364265 104 ntBASIC4.06□□□□□ -1.76
TOP3BO95985 RNY4P34-201ENST00000364779 95 ntBASIC4.06□□□□□ -1.76
TOP3BO95985 RNU6-116P-201ENST00000384042 109 ntBASIC4.06□□□□□ -1.76
TOP3BO95985 MT-TD-201ENST00000387419 68 ntBASIC4.06□□□□□ -1.76
TOP3BO95985 MIR320C1-201ENST00000408566 88 ntBASIC4.06□□□□□ -1.76
TOP3BO95985 Y_RNA.608-201ENST00000410647 95 ntBASIC4.06□□□□□ -1.76
TOP3BO95985 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC4.06□□□□□ -1.76
TOP3BO95985 USP9YP27-201ENST00000418455 438 ntBASIC4.06□□□□□ -1.76
TOP3BO95985 USP9YP36-201ENST00000424581 829 ntBASIC4.06□□□□□ -1.76
TOP3BO95985 AL358472.1-201ENST00000431295 329 ntBASIC4.06□□□□□ -1.76
TOP3BO95985 HMGN2P31-201ENST00000432430 273 ntBASIC4.06□□□□□ -1.76
TOP3BO95985 LSM1P1-201ENST00000438629 273 ntBASIC4.06□□□□□ -1.76
TOP3BO95985 CYCSP32-201ENST00000440548 321 ntBASIC4.06□□□□□ -1.76
TOP3BO95985 MTCO1P27-201ENST00000448269 226 ntBASIC4.06□□□□□ -1.76
TOP3BO95985 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.06□□□□□ -1.76
TOP3BO95985 MTCO3P20-201ENST00000454926 688 ntBASIC4.06□□□□□ -1.76
TOP3BO95985 RNU7-136P-201ENST00000458819 69 ntBASIC4.06□□□□□ -1.76
TOP3BO95985 AC017015.1-201ENST00000477387 286 ntBASIC4.06□□□□□ -1.76
TOP3BO95985 RPS29P25-201ENST00000481709 171 ntBASIC4.06□□□□□ -1.76
TOP3BO95985 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
TOP3BO95985 AC106872.3-201ENST00000495104 446 ntBASIC4.06□□□□□ -1.76
TOP3BO95985 MTCO2P30-201ENST00000503662 364 ntBASIC4.06□□□□□ -1.76
TOP3BO95985 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.06□□□□□ -1.76
TOP3BO95985 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.06□□□□□ -1.76
TOP3BO95985 AL592156.1-201ENST00000508758 304 ntBASIC4.06□□□□□ -1.76
TOP3BO95985 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.06□□□□□ -1.76
TOP3BO95985 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.06□□□□□ -1.76
TOP3BO95985 RNU1-95P-201ENST00000516357 160 ntBASIC4.06□□□□□ -1.76
TOP3BO95985 RNU1-128P-201ENST00000516704 160 ntBASIC4.06□□□□□ -1.76
TOP3BO95985 IGLVIV-53-201ENST00000520107 367 ntBASIC4.06□□□□□ -1.76
TOP3BO95985 AP003467.2-201ENST00000520175 319 ntBASIC4.06□□□□□ -1.76
TOP3BO95985 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.06□□□□□ -1.76
TOP3BO95985 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC4.06□□□□□ -1.76
TOP3BO95985 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.06□□□□□ -1.76
TOP3BO95985 OR5AL2P-201ENST00000532185 920 ntBASIC4.06□□□□□ -1.76
TOP3BO95985 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.06□□□□□ -1.76
TOP3BO95985 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.06□□□□□ -1.76
TOP3BO95985 AL138976.2-201ENST00000563989 694 ntBASIC4.06□□□□□ -1.76
TOP3BO95985 AC044792.1-201ENST00000593294 196 ntBASIC4.06□□□□□ -1.76
TOP3BO95985 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.06□□□□□ -1.76
TOP3BO95985 AC078795.3-201ENST00000602913 472 ntBASIC4.06□□□□□ -1.76
TOP3BO95985 AC005034.5-201ENST00000604219 466 ntBASIC4.06□□□□□ -1.76
TOP3BO95985 HMGB1P50-201ENST00000605814 607 ntBASIC4.06□□□□□ -1.76
TOP3BO95985 MIR1321-201ENST00000637766 79 ntBASIC4.06□□□□□ -1.76
TOP3BO95985 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC4.05□□□□□ -1.76
TOP3BO95985 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.05□□□□□ -1.76
TOP3BO95985 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
TOP3BO95985 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.05□□□□□ -1.76
TOP3BO95985 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.05□□□□□ -1.76
TOP3BO95985 OR11H5P-202ENST00000641612 1325 ntBASIC4.05□□□□□ -1.76
TOP3BO95985 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
TOP3BO95985 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
TOP3BO95985 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.05□□□□□ -1.76
TOP3BO95985 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
TOP3BO95985 Y_RNA.535-201ENST00000384612 99 ntBASIC4.05□□□□□ -1.76
TOP3BO95985 MIR30B-201ENST00000384850 88 ntBASIC4.05□□□□□ -1.76
TOP3BO95985 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.05□□□□□ -1.76
TOP3BO95985 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
TOP3BO95985 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.05□□□□□ -1.76
TOP3BO95985 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC4.05□□□□□ -1.76
TOP3BO95985 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC4.05□□□□□ -1.76
TOP3BO95985 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.05□□□□□ -1.76
TOP3BO95985 RPL23AP74-201ENST00000437246 471 ntBASIC4.05□□□□□ -1.76
TOP3BO95985 SKP1P1-201ENST00000438081 489 ntBASIC4.05□□□□□ -1.76
TOP3BO95985 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC4.05□□□□□ -1.76
TOP3BO95985 ARPC3P5-201ENST00000448802 534 ntBASIC4.05□□□□□ -1.76
TOP3BO95985 AC079448.1-201ENST00000449377 373 ntBASIC4.05□□□□□ -1.76
TOP3BO95985 AC104073.1-201ENST00000451988 151 ntBASIC4.05□□□□□ -1.76
TOP3BO95985 Z82190.1-201ENST00000454534 490 ntBASIC4.05□□□□□ -1.76
TOP3BO95985 AC087312.1-201ENST00000471411 480 ntBASIC4.05□□□□□ -1.76
TOP3BO95985 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
TOP3BO95985 AC023598.1-201ENST00000472521 361 ntBASIC4.05□□□□□ -1.76
TOP3BO95985 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.05□□□□□ -1.76
TOP3BO95985 HMGN1P12-201ENST00000499125 195 ntBASIC4.05□□□□□ -1.76
TOP3BO95985 AC022447.3-201ENST00000506865 495 ntBASIC4.05□□□□□ -1.76
TOP3BO95985 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC4.05□□□□□ -1.76
TOP3BO95985 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.05□□□□□ -1.76
TOP3BO95985 MTND1P35-201ENST00000526739 508 ntBASIC4.05□□□□□ -1.76
TOP3BO95985 OR8L1P-201ENST00000534005 955 ntBASIC4.05□□□□□ -1.76
TOP3BO95985 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
TOP3BO95985 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC4.05□□□□□ -1.76
TOP3BO95985 AC123904.3-201ENST00000547218 814 ntBASIC4.05□□□□□ -1.76
TOP3BO95985 AL161713.1-201ENST00000555538 145 ntBASIC4.05□□□□□ -1.76
TOP3BO95985 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC4.05□□□□□ -1.76
TOP3BO95985 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.05□□□□□ -1.76
TOP3BO95985 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
TOP3BO95985 AP001180.3-201ENST00000582221 145 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms