Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 RANP8-201ENST00000444720 713 ntBASIC5.67□□□□□ -1.5
GFRA3O60609 RPL7L1P1-201ENST00000448259 785 ntBASIC5.67□□□□□ -1.5
GFRA3O60609 DUTP1-201ENST00000493631 470 ntBASIC5.67□□□□□ -1.5
GFRA3O60609 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.67□□□□□ -1.5
GFRA3O60609 HMGN1P11-201ENST00000508668 303 ntBASIC5.67□□□□□ -1.5
GFRA3O60609 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC5.67□□□□□ -1.5
GFRA3O60609 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.67□□□□□ -1.5
GFRA3O60609 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.67□□□□□ -1.5
GFRA3O60609 RNU5F-2P-201ENST00000516066 82 ntBASIC5.67□□□□□ -1.5
GFRA3O60609 AC021678.3-201ENST00000517893 476 ntBASIC5.67□□□□□ -1.5
GFRA3O60609 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.67□□□□□ -1.5
GFRA3O60609 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
GFRA3O60609 AC027229.1-201ENST00000583887 253 ntBASIC5.67□□□□□ -1.5
GFRA3O60609 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.67□□□□□ -1.5
GFRA3O60609 AL354798.1-201ENST00000622505 329 ntBASIC5.67□□□□□ -1.5
GFRA3O60609 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
GFRA3O60609 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
GFRA3O60609 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
GFRA3O60609 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
GFRA3O60609 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
GFRA3O60609 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC5.67□□□□□ -1.5
GFRA3O60609 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.67□□□□□ -1.5
GFRA3O60609 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
GFRA3O60609 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
GFRA3O60609 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
GFRA3O60609 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
GFRA3O60609 AK9-203ENST00000368948 2478 ntTSL 5 BASIC5.67□□□□□ -1.5
GFRA3O60609 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
GFRA3O60609 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
GFRA3O60609 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC5.66□□□□□ -1.5
GFRA3O60609 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
GFRA3O60609 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
GFRA3O60609 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
GFRA3O60609 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
GFRA3O60609 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC5.66□□□□□ -1.5
GFRA3O60609 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
GFRA3O60609 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.66□□□□□ -1.5
GFRA3O60609 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC5.66□□□□□ -1.5
GFRA3O60609 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
GFRA3O60609 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
GFRA3O60609 Y_RNA.294-201ENST00000364916 102 ntBASIC5.66□□□□□ -1.5
GFRA3O60609 RNU6-741P-201ENST00000383889 107 ntBASIC5.66□□□□□ -1.5
GFRA3O60609 MIR433-201ENST00000384837 93 ntBASIC5.66□□□□□ -1.5
GFRA3O60609 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
GFRA3O60609 SNORD72-201ENST00000390994 80 ntBASIC5.66□□□□□ -1.5
GFRA3O60609 SNORD37.2-201ENST00000391075 66 ntBASIC5.66□□□□□ -1.5
GFRA3O60609 RNA5SP225-201ENST00000410874 135 ntBASIC5.66□□□□□ -1.5
GFRA3O60609 AL445687.1-201ENST00000439946 251 ntBASIC5.66□□□□□ -1.5
GFRA3O60609 AC016700.2-201ENST00000446011 156 ntBASIC5.66□□□□□ -1.5
GFRA3O60609 RPL23AP3-201ENST00000453844 468 ntBASIC5.66□□□□□ -1.5
GFRA3O60609 snoU13.20-201ENST00000459180 104 ntBASIC5.66□□□□□ -1.5
GFRA3O60609 RPL26P26-201ENST00000480251 434 ntBASIC5.66□□□□□ -1.5
GFRA3O60609 AC139453.2-201ENST00000487255 133 ntBASIC5.66□□□□□ -1.5
GFRA3O60609 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC5.66□□□□□ -1.5
GFRA3O60609 SNORA40.9-201ENST00000515895 93 ntBASIC5.66□□□□□ -1.5
GFRA3O60609 RNU7-175P-201ENST00000515915 61 ntBASIC5.66□□□□□ -1.5
GFRA3O60609 AC092490.3-201ENST00000545370 572 ntBASIC5.66□□□□□ -1.5
GFRA3O60609 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.66□□□□□ -1.5
GFRA3O60609 MIR4284-201ENST00000578924 81 ntBASIC5.66□□□□□ -1.5
GFRA3O60609 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.66□□□□□ -1.5
GFRA3O60609 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.66□□□□□ -1.5
GFRA3O60609 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
GFRA3O60609 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
GFRA3O60609 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
GFRA3O60609 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
GFRA3O60609 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
GFRA3O60609 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC5.66□□□□□ -1.5
GFRA3O60609 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC5.66□□□□□ -1.5
GFRA3O60609 ZNF658B-201ENST00000602828 3408 ntBASIC5.65□□□□□ -1.5
GFRA3O60609 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.5
GFRA3O60609 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
GFRA3O60609 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
GFRA3O60609 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
GFRA3O60609 MROH3P-201ENST00000435735 2676 ntBASIC5.65□□□□□ -1.5
GFRA3O60609 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC5.65□□□□□ -1.5
GFRA3O60609 CLCA3P-203ENST00000490028 2781 ntBASIC5.65□□□□□ -1.5
GFRA3O60609 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
GFRA3O60609 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.65□□□□□ -1.5
GFRA3O60609 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.5
GFRA3O60609 RNA5SP123-201ENST00000363244 119 ntBASIC5.65□□□□□ -1.5
GFRA3O60609 RN7SKP227-201ENST00000364445 330 ntBASIC5.65□□□□□ -1.5
GFRA3O60609 RNU6-1180P-201ENST00000364935 107 ntBASIC5.65□□□□□ -1.5
GFRA3O60609 RNU6-106P-201ENST00000384405 107 ntBASIC5.65□□□□□ -1.5
GFRA3O60609 SNORA67-201ENST00000384423 137 ntBASIC5.65□□□□□ -1.5
GFRA3O60609 MIR29B2-201ENST00000385055 81 ntBASIC5.65□□□□□ -1.5
GFRA3O60609 Y_RNA.630-201ENST00000411370 108 ntBASIC5.65□□□□□ -1.5
GFRA3O60609 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.65□□□□□ -1.5
GFRA3O60609 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
GFRA3O60609 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.65□□□□□ -1.5
GFRA3O60609 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
GFRA3O60609 AC112187.1-201ENST00000455837 479 ntBASIC5.65□□□□□ -1.5
GFRA3O60609 AC004129.2-201ENST00000457229 287 ntBASIC5.65□□□□□ -1.5
GFRA3O60609 RN7SL591P-201ENST00000496150 292 ntBASIC5.65□□□□□ -1.5
GFRA3O60609 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.65□□□□□ -1.5
GFRA3O60609 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
GFRA3O60609 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
GFRA3O60609 AC015720.1-201ENST00000565251 277 ntBASIC5.65□□□□□ -1.5
GFRA3O60609 LRRC37A5P-203ENST00000580181 585 ntBASIC5.65□□□□□ -1.5
GFRA3O60609 RNU4ATAC-201ENST00000580972 127 ntBASIC5.65□□□□□ -1.5
GFRA3O60609 AC119403.2-201ENST00000590960 598 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms