Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 CCNG2P1-201ENST00000549521 1000 ntBASIC3.71□□□□□ -1.82
LDB2O43679 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.71□□□□□ -1.82
LDB2O43679 AP000860.1-201ENST00000605250 559 ntBASIC3.71□□□□□ -1.82
LDB2O43679 AP003117.2-201ENST00000606010 545 ntBASIC3.71□□□□□ -1.82
LDB2O43679 AL592295.2-201ENST00000612578 206 ntBASIC3.71□□□□□ -1.82
LDB2O43679 AC010149.2-201ENST00000637608 315 ntBASIC3.71□□□□□ -1.82
LDB2O43679 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
LDB2O43679 AC006504.1-201ENST00000562493 3666 ntBASIC3.71□□□□□ -1.82
LDB2O43679 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
LDB2O43679 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.71□□□□□ -1.82
LDB2O43679 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
LDB2O43679 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
LDB2O43679 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.7□□□□□ -1.82
LDB2O43679 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
LDB2O43679 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
LDB2O43679 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.7□□□□□ -1.82
LDB2O43679 XIAPP3-201ENST00000312918 795 ntBASIC3.7□□□□□ -1.82
LDB2O43679 SNORA70E-201ENST00000384492 135 ntBASIC3.7□□□□□ -1.82
LDB2O43679 U8.11-201ENST00000384699 133 ntBASIC3.7□□□□□ -1.82
LDB2O43679 U8.12-201ENST00000384701 133 ntBASIC3.7□□□□□ -1.82
LDB2O43679 GSTA9P-201ENST00000406231 611 ntBASIC3.7□□□□□ -1.82
LDB2O43679 RNU2-8P-201ENST00000410727 190 ntBASIC3.7□□□□□ -1.82
LDB2O43679 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
LDB2O43679 AC127526.1-201ENST00000417526 366 ntBASIC3.7□□□□□ -1.82
LDB2O43679 HMGB3P20-201ENST00000417997 600 ntBASIC3.7□□□□□ -1.82
LDB2O43679 ISCA1P6-201ENST00000427740 390 ntBASIC3.7□□□□□ -1.82
LDB2O43679 MRPS10P2-201ENST00000431226 381 ntBASIC3.7□□□□□ -1.82
LDB2O43679 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.7□□□□□ -1.82
LDB2O43679 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.7□□□□□ -1.82
LDB2O43679 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
LDB2O43679 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.7□□□□□ -1.82
LDB2O43679 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.7□□□□□ -1.82
LDB2O43679 NPM1P49-201ENST00000448027 714 ntBASIC3.7□□□□□ -1.82
LDB2O43679 AL133547.1-201ENST00000448546 220 ntBASIC3.7□□□□□ -1.82
LDB2O43679 PSPHP1-201ENST00000450062 261 ntBASIC3.7□□□□□ -1.82
LDB2O43679 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.7□□□□□ -1.82
LDB2O43679 U8.18-201ENST00000459285 133 ntBASIC3.7□□□□□ -1.82
LDB2O43679 SNORD108-201ENST00000459332 71 ntBASIC3.7□□□□□ -1.82
LDB2O43679 RPL7P15-201ENST00000461190 712 ntBASIC3.7□□□□□ -1.82
LDB2O43679 AC021382.1-201ENST00000483523 359 ntBASIC3.7□□□□□ -1.82
LDB2O43679 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.7□□□□□ -1.82
LDB2O43679 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
LDB2O43679 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.7□□□□□ -1.82
LDB2O43679 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.7□□□□□ -1.82
LDB2O43679 TRMT10BP1-201ENST00000519377 943 ntBASIC3.7□□□□□ -1.82
LDB2O43679 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.7□□□□□ -1.82
LDB2O43679 AC008489.1-201ENST00000524271 483 ntBASIC3.7□□□□□ -1.82
LDB2O43679 AP003181.2-201ENST00000528941 181 ntBASIC3.7□□□□□ -1.82
LDB2O43679 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC3.7□□□□□ -1.82
LDB2O43679 AC124947.2-202ENST00000552735 133 ntBASIC3.7□□□□□ -1.82
LDB2O43679 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.7□□□□□ -1.82
LDB2O43679 CENPUP2-201ENST00000555897 1186 ntBASIC3.7□□□□□ -1.82
LDB2O43679 BNIP3P22-201ENST00000593399 556 ntBASIC3.7□□□□□ -1.82
LDB2O43679 AC004853.1-201ENST00000604902 698 ntBASIC3.7□□□□□ -1.82
LDB2O43679 AF250324.2-201ENST00000608299 610 ntBASIC3.7□□□□□ -1.82
LDB2O43679 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.7□□□□□ -1.82
LDB2O43679 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.7□□□□□ -1.82
LDB2O43679 AC039056.2-201ENST00000622261 511 ntBASIC3.7□□□□□ -1.82
LDB2O43679 CR381653.2-201ENST00000624041 768 ntBASIC3.7□□□□□ -1.82
LDB2O43679 AC124864.2-201ENST00000624736 186 ntBASIC3.7□□□□□ -1.82
LDB2O43679 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.7□□□□□ -1.82
LDB2O43679 MTND5P33-201ENST00000571250 1450 ntBASIC3.7□□□□□ -1.82
LDB2O43679 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
LDB2O43679 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
LDB2O43679 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
LDB2O43679 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
LDB2O43679 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.7□□□□□ -1.82
LDB2O43679 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
LDB2O43679 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
LDB2O43679 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
LDB2O43679 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
LDB2O43679 SNORD51-201ENST00000384320 80 ntBASIC3.69□□□□□ -1.82
LDB2O43679 MT-TC-201ENST00000387405 66 ntBASIC3.69□□□□□ -1.82
LDB2O43679 U3.20-201ENST00000390909 217 ntBASIC3.69□□□□□ -1.82
LDB2O43679 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
LDB2O43679 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.69□□□□□ -1.82
LDB2O43679 MRPL42P2-201ENST00000403169 426 ntBASIC3.69□□□□□ -1.82
LDB2O43679 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.69□□□□□ -1.82
LDB2O43679 MTND1P21-201ENST00000412991 285 ntBASIC3.69□□□□□ -1.82
LDB2O43679 MTND1P23-201ENST00000416931 372 ntBASIC3.69□□□□□ -1.82
LDB2O43679 BX295541.1-201ENST00000417774 250 ntBASIC3.69□□□□□ -1.82
LDB2O43679 CYP4F29P-201ENST00000420685 446 ntBASIC3.69□□□□□ -1.82
LDB2O43679 PIGFP2-201ENST00000421400 651 ntBASIC3.69□□□□□ -1.82
LDB2O43679 USP9YP36-201ENST00000424581 829 ntBASIC3.69□□□□□ -1.82
LDB2O43679 AL451062.2-201ENST00000427515 271 ntBASIC3.69□□□□□ -1.82
LDB2O43679 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.69□□□□□ -1.82
LDB2O43679 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.69□□□□□ -1.82
LDB2O43679 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.69□□□□□ -1.82
LDB2O43679 MTCO3P20-201ENST00000454926 688 ntBASIC3.69□□□□□ -1.82
LDB2O43679 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.69□□□□□ -1.82
LDB2O43679 RPL23AP41-201ENST00000484754 458 ntBASIC3.69□□□□□ -1.82
LDB2O43679 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.69□□□□□ -1.82
LDB2O43679 COX7A2P2-201ENST00000505291 250 ntBASIC3.69□□□□□ -1.82
LDB2O43679 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.69□□□□□ -1.82
LDB2O43679 RNU6-27P-201ENST00000516146 107 ntBASIC3.69□□□□□ -1.82
LDB2O43679 RNU6-314P-201ENST00000516574 104 ntBASIC3.69□□□□□ -1.82
LDB2O43679 AC134698.4-201ENST00000523451 826 ntBASIC3.69□□□□□ -1.82
LDB2O43679 MTCYBP41-201ENST00000528913 1123 ntBASIC3.69□□□□□ -1.82
LDB2O43679 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
LDB2O43679 SETP2-201ENST00000553886 926 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms