Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
CACNA1AO00555 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
CACNA1AO00555 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC1.72□□□□□ -2.13
CACNA1AO00555 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC1.72□□□□□ -2.13
CACNA1AO00555 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC1.72□□□□□ -2.13
CACNA1AO00555 Y_RNA.280-201ENST00000364765 112 ntBASIC1.72□□□□□ -2.13
CACNA1AO00555 AL445669.1-201ENST00000426743 755 ntBASIC1.72□□□□□ -2.13
CACNA1AO00555 SDR42E1P3-201ENST00000438345 502 ntBASIC1.72□□□□□ -2.13
CACNA1AO00555 RN7SL297P-201ENST00000483161 293 ntBASIC1.72□□□□□ -2.13
CACNA1AO00555 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.72□□□□□ -2.13
CACNA1AO00555 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.72□□□□□ -2.13
CACNA1AO00555 MIR4506-201ENST00000584693 77 ntBASIC1.72□□□□□ -2.13
CACNA1AO00555 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC1.72□□□□□ -2.13
CACNA1AO00555 AC002076.2-201ENST00000617362 122 ntBASIC1.72□□□□□ -2.13
CACNA1AO00555 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC1.71□□□□□ -2.13
CACNA1AO00555 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
CACNA1AO00555 CBWD4P-201ENST00000445695 655 ntBASIC1.71□□□□□ -2.14
CACNA1AO00555 RPL36AP33-201ENST00000450395 310 ntBASIC1.71□□□□□ -2.14
CACNA1AO00555 MTCYBP17-201ENST00000503579 789 ntBASIC1.71□□□□□ -2.14
CACNA1AO00555 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC1.71□□□□□ -2.14
CACNA1AO00555 AL645939.4-201ENST00000604495 135 ntBASIC1.71□□□□□ -2.14
CACNA1AO00555 AC073387.2-201ENST00000604797 784 ntBASIC1.71□□□□□ -2.14
CACNA1AO00555 AC090525.3-201ENST00000605601 189 ntBASIC1.71□□□□□ -2.14
CACNA1AO00555 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.71□□□□□ -2.14
CACNA1AO00555 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
CACNA1AO00555 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.71□□□□□ -2.14
CACNA1AO00555 RHEBP3-201ENST00000411920 351 ntBASIC1.71□□□□□ -2.14
CACNA1AO00555 HMGB3P31-201ENST00000413333 595 ntBASIC1.71□□□□□ -2.14
CACNA1AO00555 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC1.71□□□□□ -2.14
CACNA1AO00555 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.71□□□□□ -2.14
CACNA1AO00555 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC1.71□□□□□ -2.14
CACNA1AO00555 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.71□□□□□ -2.14
CACNA1AO00555 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.71□□□□□ -2.14
CACNA1AO00555 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
CACNA1AO00555 AL161713.1-201ENST00000555538 145 ntBASIC1.71□□□□□ -2.14
CACNA1AO00555 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC1.71□□□□□ -2.14
CACNA1AO00555 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.71□□□□□ -2.14
CACNA1AO00555 BX649567.1-201ENST00000642071 1134 ntBASIC1.71□□□□□ -2.14
CACNA1AO00555 AC135776.4-201ENST00000624300 1904 ntBASIC1.71□□□□□ -2.14
CACNA1AO00555 ANKRD62P1-201ENST00000434304 1623 ntBASIC1.7□□□□□ -2.14
CACNA1AO00555 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.7□□□□□ -2.14
CACNA1AO00555 RPL21P2-201ENST00000440049 481 ntBASIC1.7□□□□□ -2.14
CACNA1AO00555 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC1.7□□□□□ -2.14
CACNA1AO00555 SUMO2P6-201ENST00000505273 288 ntBASIC1.7□□□□□ -2.14
CACNA1AO00555 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC1.7□□□□□ -2.14
CACNA1AO00555 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC1.7□□□□□ -2.14
CACNA1AO00555 SNORD53B-201ENST00000577887 78 ntBASIC1.7□□□□□ -2.14
CACNA1AO00555 PSMA6P4-201ENST00000603247 718 ntBASIC1.7□□□□□ -2.14
CACNA1AO00555 U7.8-201ENST00000619968 63 ntBASIC1.7□□□□□ -2.14
CACNA1AO00555 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.7□□□□□ -2.14
CACNA1AO00555 Y_RNA.559-201ENST00000384686 107 ntBASIC1.7□□□□□ -2.14
CACNA1AO00555 RNA5SP354-201ENST00000391247 136 ntBASIC1.7□□□□□ -2.14
CACNA1AO00555 AC000111.3-201ENST00000433478 193 ntBASIC1.7□□□□□ -2.14
CACNA1AO00555 HMGB1P26-201ENST00000452520 628 ntBASIC1.7□□□□□ -2.14
CACNA1AO00555 RNU4ATAC15P-201ENST00000516415 126 ntBASIC1.7□□□□□ -2.14
CACNA1AO00555 AP001207.1-201ENST00000524051 481 ntBASIC1.7□□□□□ -2.14
CACNA1AO00555 AL645944.1-201ENST00000603857 493 ntBASIC1.7□□□□□ -2.14
CACNA1AO00555 MIR6078-201ENST00000611069 100 ntBASIC1.7□□□□□ -2.14
CACNA1AO00555 AC130650.2-201ENST00000618736 2403 ntBASIC1.7□□□□□ -2.14
CACNA1AO00555 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
CACNA1AO00555 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
CACNA1AO00555 AC245517.2-201ENST00000442890 346 ntBASIC1.69□□□□□ -2.14
CACNA1AO00555 EXTL2P1-201ENST00000446218 416 ntBASIC1.69□□□□□ -2.14
CACNA1AO00555 SSXP1-201ENST00000453640 473 ntBASIC1.69□□□□□ -2.14
CACNA1AO00555 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.69□□□□□ -2.14
CACNA1AO00555 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC1.69□□□□□ -2.14
CACNA1AO00555 AC074029.2-201ENST00000551045 634 ntBASIC1.69□□□□□ -2.14
CACNA1AO00555 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC1.69□□□□□ -2.14
CACNA1AO00555 AC078899.5-201ENST00000612475 178 ntBASIC1.69□□□□□ -2.14
CACNA1AO00555 uc_338.12-201ENST00000616344 181 ntBASIC1.69□□□□□ -2.14
CACNA1AO00555 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC1.69□□□□□ -2.14
CACNA1AO00555 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.69□□□□□ -2.14
CACNA1AO00555 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC1.69□□□□□ -2.14
CACNA1AO00555 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC1.69□□□□□ -2.14
CACNA1AO00555 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.69□□□□□ -2.14
CACNA1AO00555 RNU1-51P-201ENST00000365345 176 ntBASIC1.69□□□□□ -2.14
CACNA1AO00555 EIF1AXP1-201ENST00000419267 435 ntBASIC1.69□□□□□ -2.14
CACNA1AO00555 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.69□□□□□ -2.14
CACNA1AO00555 GSTA11P-201ENST00000452866 669 ntBASIC1.69□□□□□ -2.14
CACNA1AO00555 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC1.69□□□□□ -2.14
CACNA1AO00555 CREM-226ENST00000469949 721 ntTSL 3 BASIC1.69□□□□□ -2.14
CACNA1AO00555 NPM1P52-201ENST00000518264 846 ntBASIC1.69□□□□□ -2.14
CACNA1AO00555 AC008121.2-201ENST00000614647 523 ntBASIC1.69□□□□□ -2.14
CACNA1AO00555 DEFA7P-201ENST00000382676 285 ntBASIC1.68□□□□□ -2.14
CACNA1AO00555 RNU6-43P-201ENST00000384302 107 ntBASIC1.68□□□□□ -2.14
CACNA1AO00555 AC017078.1-201ENST00000416146 368 ntBASIC1.68□□□□□ -2.14
CACNA1AO00555 AL356806.1-201ENST00000422524 916 ntBASIC1.68□□□□□ -2.14
CACNA1AO00555 RPL36AP6-201ENST00000435770 321 ntBASIC1.68□□□□□ -2.14
CACNA1AO00555 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.68□□□□□ -2.14
CACNA1AO00555 RPS27P29-201ENST00000463110 252 ntBASIC1.68□□□□□ -2.14
CACNA1AO00555 AP000852.1-201ENST00000472460 573 ntBASIC1.68□□□□□ -2.14
CACNA1AO00555 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.68□□□□□ -2.14
CACNA1AO00555 PDCL2P2-201ENST00000533651 189 ntBASIC1.68□□□□□ -2.14
CACNA1AO00555 APOOP3-201ENST00000536787 586 ntBASIC1.68□□□□□ -2.14
CACNA1AO00555 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC1.68□□□□□ -2.14
CACNA1AO00555 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC1.68□□□□□ -2.14
CACNA1AO00555 PNPT1P2-201ENST00000456768 2050 ntBASIC1.68□□□□□ -2.14
CACNA1AO00555 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.68□□□□□ -2.14
CACNA1AO00555 RNU6-249P-201ENST00000363016 102 ntBASIC1.68□□□□□ -2.14
CACNA1AO00555 RNU4-91P-201ENST00000364778 135 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms