Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.85□□□□□ -1.79
EIF3FO00303 AC026726.1-201ENST00000512859 601 ntBASIC3.85□□□□□ -1.79
EIF3FO00303 RNA5SP179-201ENST00000517284 121 ntBASIC3.85□□□□□ -1.79
EIF3FO00303 PAICSP4-201ENST00000517543 1253 ntBASIC3.85□□□□□ -1.79
EIF3FO00303 AP003467.2-201ENST00000520175 319 ntBASIC3.85□□□□□ -1.79
EIF3FO00303 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.85□□□□□ -1.79
EIF3FO00303 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.85□□□□□ -1.79
EIF3FO00303 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.85□□□□□ -1.79
EIF3FO00303 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.85□□□□□ -1.79
EIF3FO00303 MIR548AB-201ENST00000584917 84 ntBASIC3.85□□□□□ -1.79
EIF3FO00303 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.85□□□□□ -1.79
EIF3FO00303 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.85□□□□□ -1.79
EIF3FO00303 BNIP3P8-201ENST00000597863 560 ntBASIC3.85□□□□□ -1.79
EIF3FO00303 AC008277.2-201ENST00000605196 797 ntBASIC3.85□□□□□ -1.79
EIF3FO00303 SDR42E1P2-201ENST00000614861 481 ntBASIC3.85□□□□□ -1.79
EIF3FO00303 AC010133.1-201ENST00000615809 842 ntBASIC3.85□□□□□ -1.79
EIF3FO00303 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
EIF3FO00303 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
EIF3FO00303 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
EIF3FO00303 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.85□□□□□ -1.79
EIF3FO00303 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.85□□□□□ -1.79
EIF3FO00303 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
EIF3FO00303 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
EIF3FO00303 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
EIF3FO00303 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.85□□□□□ -1.79
EIF3FO00303 RLIMP1-201ENST00000339626 1680 ntBASIC3.84□□□□□ -1.79
EIF3FO00303 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
EIF3FO00303 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
EIF3FO00303 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.84□□□□□ -1.79
EIF3FO00303 RN7SKP227-201ENST00000364445 330 ntBASIC3.84□□□□□ -1.79
EIF3FO00303 SNORD116-1-201ENST00000384335 95 ntBASIC3.84□□□□□ -1.79
EIF3FO00303 EI24P2-201ENST00000397776 1076 ntBASIC3.84□□□□□ -1.79
EIF3FO00303 HLFP1-201ENST00000402375 499 ntBASIC3.84□□□□□ -1.79
EIF3FO00303 RPL21P65-201ENST00000406094 466 ntBASIC3.84□□□□□ -1.79
EIF3FO00303 RNA5SP317-201ENST00000410176 116 ntBASIC3.84□□□□□ -1.79
EIF3FO00303 RNA5SP311-201ENST00000411290 116 ntBASIC3.84□□□□□ -1.79
EIF3FO00303 RNA5SP107-201ENST00000411358 122 ntBASIC3.84□□□□□ -1.79
EIF3FO00303 ELOCP17-201ENST00000414751 326 ntBASIC3.84□□□□□ -1.79
EIF3FO00303 AC092017.2-201ENST00000427600 362 ntBASIC3.84□□□□□ -1.79
EIF3FO00303 MTND1P28-201ENST00000435623 950 ntBASIC3.84□□□□□ -1.79
EIF3FO00303 NDUFB4P6-201ENST00000436819 366 ntBASIC3.84□□□□□ -1.79
EIF3FO00303 RPL17P49-201ENST00000443728 411 ntBASIC3.84□□□□□ -1.79
EIF3FO00303 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.84□□□□□ -1.79
EIF3FO00303 HSFY6P-201ENST00000445573 403 ntBASIC3.84□□□□□ -1.79
EIF3FO00303 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.84□□□□□ -1.79
EIF3FO00303 PDSS1P2-201ENST00000449397 678 ntBASIC3.84□□□□□ -1.79
EIF3FO00303 DNAJC19P1-201ENST00000455312 319 ntBASIC3.84□□□□□ -1.79
EIF3FO00303 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.84□□□□□ -1.79
EIF3FO00303 RPL31P60-201ENST00000478450 367 ntBASIC3.84□□□□□ -1.79
EIF3FO00303 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.84□□□□□ -1.79
EIF3FO00303 AL049874.1-201ENST00000489560 388 ntBASIC3.84□□□□□ -1.79
EIF3FO00303 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC3.84□□□□□ -1.79
EIF3FO00303 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.84□□□□□ -1.79
EIF3FO00303 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.84□□□□□ -1.79
EIF3FO00303 RNA5SP315-201ENST00000516340 116 ntBASIC3.84□□□□□ -1.79
EIF3FO00303 Y_RNA.695-201ENST00000516715 107 ntBASIC3.84□□□□□ -1.79
EIF3FO00303 RNA5SP312-201ENST00000517068 116 ntBASIC3.84□□□□□ -1.79
EIF3FO00303 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
EIF3FO00303 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.84□□□□□ -1.79
EIF3FO00303 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.84□□□□□ -1.79
EIF3FO00303 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.84□□□□□ -1.79
EIF3FO00303 AL157394.1-201ENST00000562983 1224 ntBASIC3.84□□□□□ -1.79
EIF3FO00303 AC012414.6-201ENST00000568241 401 ntBASIC3.84□□□□□ -1.79
EIF3FO00303 AC091167.4-201ENST00000605079 184 ntBASIC3.84□□□□□ -1.79
EIF3FO00303 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.84□□□□□ -1.79
EIF3FO00303 AC108747.1-201ENST00000609508 535 ntBASIC3.84□□□□□ -1.79
EIF3FO00303 AC009570.1-201ENST00000609599 745 ntBASIC3.84□□□□□ -1.79
EIF3FO00303 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.84□□□□□ -1.79
EIF3FO00303 SNHG22-203ENST00000617833 660 ntBASIC3.84□□□□□ -1.79
EIF3FO00303 AC068831.8-201ENST00000620171 435 ntBASIC3.84□□□□□ -1.79
EIF3FO00303 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
EIF3FO00303 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.84□□□□□ -1.8
EIF3FO00303 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
EIF3FO00303 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.84□□□□□ -1.8
EIF3FO00303 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
EIF3FO00303 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
EIF3FO00303 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.83□□□□□ -1.8
EIF3FO00303 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.83□□□□□ -1.8
EIF3FO00303 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
EIF3FO00303 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
EIF3FO00303 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
EIF3FO00303 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
EIF3FO00303 MIR591-201ENST00000385290 95 ntBASIC3.83□□□□□ -1.8
EIF3FO00303 MRPL42P2-201ENST00000403169 426 ntBASIC3.83□□□□□ -1.8
EIF3FO00303 FAT1P1-201ENST00000406588 507 ntBASIC3.83□□□□□ -1.8
EIF3FO00303 HMGN1P14-201ENST00000412459 517 ntBASIC3.83□□□□□ -1.8
EIF3FO00303 BX842559.1-201ENST00000419615 532 ntBASIC3.83□□□□□ -1.8
EIF3FO00303 TMEM167AP1-201ENST00000423409 219 ntBASIC3.83□□□□□ -1.8
EIF3FO00303 AC093156.1-201ENST00000440382 670 ntBASIC3.83□□□□□ -1.8
EIF3FO00303 TAF9P1-201ENST00000445421 515 ntBASIC3.83□□□□□ -1.8
EIF3FO00303 SSXP4-201ENST00000451349 245 ntBASIC3.83□□□□□ -1.8
EIF3FO00303 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.83□□□□□ -1.8
EIF3FO00303 AC073387.1-201ENST00000453261 709 ntBASIC3.83□□□□□ -1.8
EIF3FO00303 TAF9P2-201ENST00000454958 515 ntBASIC3.83□□□□□ -1.8
EIF3FO00303 MTND1P12-201ENST00000455231 147 ntBASIC3.83□□□□□ -1.8
EIF3FO00303 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.83□□□□□ -1.8
EIF3FO00303 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.83□□□□□ -1.8
EIF3FO00303 AC105313.1-201ENST00000509121 353 ntBASIC3.83□□□□□ -1.8
EIF3FO00303 RNA5SP164-201ENST00000516533 110 ntBASIC3.83□□□□□ -1.8
EIF3FO00303 RNU6-64P-201ENST00000517119 105 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms