Protein–RNA interactions for Protein: O00257

CBX4, E3 SUMO-protein ligase CBX4, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4O00257 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CBX4O00257 AL365440.1-201ENST00000436135 2167 ntBASIC4.57□□□□□ -1.68
CBX4O00257 MFSD8-242ENST00000641690 4199 ntBASIC4.57□□□□□ -1.68
CBX4O00257 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CBX4O00257 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CBX4O00257 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.56□□□□□ -1.68
CBX4O00257 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
CBX4O00257 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
CBX4O00257 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.56□□□□□ -1.68
CBX4O00257 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CBX4O00257 AC004972.1-201ENST00000623934 2209 ntBASIC4.56□□□□□ -1.68
CBX4O00257 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CBX4O00257 ASNSP3-201ENST00000451989 1306 ntBASIC4.56□□□□□ -1.68
CBX4O00257 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CBX4O00257 RNU6-1074P-201ENST00000383995 104 ntBASIC4.56□□□□□ -1.68
CBX4O00257 RNU6-1029P-201ENST00000384109 107 ntBASIC4.56□□□□□ -1.68
CBX4O00257 RNU6-767P-201ENST00000384132 107 ntBASIC4.56□□□□□ -1.68
CBX4O00257 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CBX4O00257 AC110754.1-201ENST00000399740 601 ntBASIC4.56□□□□□ -1.68
CBX4O00257 MIR921-201ENST00000401133 56 ntBASIC4.56□□□□□ -1.68
CBX4O00257 TXNP7-201ENST00000406296 293 ntBASIC4.56□□□□□ -1.68
CBX4O00257 RPL7AP73-201ENST00000413490 353 ntBASIC4.56□□□□□ -1.68
CBX4O00257 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.56□□□□□ -1.68
CBX4O00257 MTND4P28-201ENST00000426217 387 ntBASIC4.56□□□□□ -1.68
CBX4O00257 AC011998.1-201ENST00000433403 117 ntBASIC4.56□□□□□ -1.68
CBX4O00257 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.56□□□□□ -1.68
CBX4O00257 RPS11P1-201ENST00000451072 473 ntBASIC4.56□□□□□ -1.68
CBX4O00257 RPL7L1P8-201ENST00000469911 741 ntBASIC4.56□□□□□ -1.68
CBX4O00257 AC010631.1-201ENST00000474150 156 ntBASIC4.56□□□□□ -1.68
CBX4O00257 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.56□□□□□ -1.68
CBX4O00257 RPL23AP55-201ENST00000498163 452 ntBASIC4.56□□□□□ -1.68
CBX4O00257 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.56□□□□□ -1.68
CBX4O00257 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4.56□□□□□ -1.68
CBX4O00257 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.56□□□□□ -1.68
CBX4O00257 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.56□□□□□ -1.68
CBX4O00257 RNA5SP497-201ENST00000516081 97 ntBASIC4.56□□□□□ -1.68
CBX4O00257 RN7SKP219-201ENST00000516825 296 ntBASIC4.56□□□□□ -1.68
CBX4O00257 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.56□□□□□ -1.68
CBX4O00257 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.56□□□□□ -1.68
CBX4O00257 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.56□□□□□ -1.68
CBX4O00257 BNIP3P5-201ENST00000562290 498 ntBASIC4.56□□□□□ -1.68
CBX4O00257 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.56□□□□□ -1.68
CBX4O00257 RNF138P2-201ENST00000603490 592 ntBASIC4.56□□□□□ -1.68
CBX4O00257 AC025034.2-201ENST00000623264 286 ntBASIC4.56□□□□□ -1.68
CBX4O00257 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
CBX4O00257 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.56□□□□□ -1.68
CBX4O00257 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CBX4O00257 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.56□□□□□ -1.68
CBX4O00257 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.56□□□□□ -1.68
CBX4O00257 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.56□□□□□ -1.68
CBX4O00257 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CBX4O00257 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CBX4O00257 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CBX4O00257 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CBX4O00257 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CBX4O00257 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CBX4O00257 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.56□□□□□ -1.68
CBX4O00257 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
CBX4O00257 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.56□□□□□ -1.68
CBX4O00257 AC000123.3-201ENST00000624029 4975 ntBASIC4.55□□□□□ -1.68
CBX4O00257 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.55□□□□□ -1.68
CBX4O00257 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
CBX4O00257 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CBX4O00257 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CBX4O00257 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CBX4O00257 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CBX4O00257 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.55□□□□□ -1.68
CBX4O00257 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.55□□□□□ -1.68
CBX4O00257 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CBX4O00257 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CBX4O00257 XIAPP3-201ENST00000312918 795 ntBASIC4.55□□□□□ -1.68
CBX4O00257 AC067945.1-201ENST00000342609 618 ntBASIC4.55□□□□□ -1.68
CBX4O00257 Y_RNA.11-201ENST00000362375 109 ntBASIC4.55□□□□□ -1.68
CBX4O00257 RNA5SP28-201ENST00000363841 119 ntBASIC4.55□□□□□ -1.68
CBX4O00257 RNU1-63P-201ENST00000383902 164 ntBASIC4.55□□□□□ -1.68
CBX4O00257 RNU6-193P-201ENST00000410977 107 ntBASIC4.55□□□□□ -1.68
CBX4O00257 EEF1A1P40-201ENST00000412883 573 ntBASIC4.55□□□□□ -1.68
CBX4O00257 OR6C66P-201ENST00000414917 930 ntBASIC4.55□□□□□ -1.68
CBX4O00257 AL161631.1-201ENST00000417933 486 ntBASIC4.55□□□□□ -1.68
CBX4O00257 AC068533.1-201ENST00000418542 415 ntBASIC4.55□□□□□ -1.68
CBX4O00257 PPP1R11P2-201ENST00000423543 382 ntBASIC4.55□□□□□ -1.68
CBX4O00257 CYCSP43-201ENST00000438233 310 ntBASIC4.55□□□□□ -1.68
CBX4O00257 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.55□□□□□ -1.68
CBX4O00257 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.55□□□□□ -1.68
CBX4O00257 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
CBX4O00257 MTND3P22-201ENST00000510932 243 ntBASIC4.55□□□□□ -1.68
CBX4O00257 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.55□□□□□ -1.68
CBX4O00257 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.55□□□□□ -1.68
CBX4O00257 RNA5SP446-201ENST00000515955 82 ntBASIC4.55□□□□□ -1.68
CBX4O00257 RNU6-840P-201ENST00000517275 65 ntBASIC4.55□□□□□ -1.68
CBX4O00257 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC4.55□□□□□ -1.68
CBX4O00257 DEFB109D-201ENST00000529497 240 ntBASIC4.55□□□□□ -1.68
CBX4O00257 AC103843.2-201ENST00000530523 682 ntBASIC4.55□□□□□ -1.68
CBX4O00257 OR5B19P-201ENST00000531766 928 ntBASIC4.55□□□□□ -1.68
CBX4O00257 OR5B10P-201ENST00000532869 642 ntBASIC4.55□□□□□ -1.68
CBX4O00257 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.55□□□□□ -1.68
CBX4O00257 BNIP3P6-201ENST00000549284 499 ntBASIC4.55□□□□□ -1.68
CBX4O00257 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.55□□□□□ -1.68
CBX4O00257 AC007224.1-201ENST00000564410 144 ntBASIC4.55□□□□□ -1.68
CBX4O00257 AL022099.1-201ENST00000604551 712 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms