Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 RNU6-798P-201ENST00000516912 103 ntBASIC3.7□□□□□ -1.82
LRRC53A6NM62 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.7□□□□□ -1.82
LRRC53A6NM62 RPL12P22-201ENST00000519073 490 ntBASIC3.7□□□□□ -1.82
LRRC53A6NM62 HIGD1AP5-201ENST00000529959 259 ntBASIC3.7□□□□□ -1.82
LRRC53A6NM62 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.7□□□□□ -1.82
LRRC53A6NM62 SNORD84-203ENST00000584275 78 ntBASIC3.7□□□□□ -1.82
LRRC53A6NM62 AC010591.1-201ENST00000603941 649 ntBASIC3.7□□□□□ -1.82
LRRC53A6NM62 AL451086.1-201ENST00000605596 223 ntBASIC3.7□□□□□ -1.82
LRRC53A6NM62 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.7□□□□□ -1.82
LRRC53A6NM62 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.7□□□□□ -1.82
LRRC53A6NM62 OR10AB1P-201ENST00000609613 938 ntBASIC3.7□□□□□ -1.82
LRRC53A6NM62 AC012531.5-201ENST00000611375 151 ntBASIC3.7□□□□□ -1.82
LRRC53A6NM62 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.7□□□□□ -1.82
LRRC53A6NM62 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
LRRC53A6NM62 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.7□□□□□ -1.82
LRRC53A6NM62 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
LRRC53A6NM62 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
LRRC53A6NM62 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
LRRC53A6NM62 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
LRRC53A6NM62 AL390237.1-201ENST00000404226 1415 ntBASIC3.7□□□□□ -1.82
LRRC53A6NM62 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
LRRC53A6NM62 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
LRRC53A6NM62 GABPAP-201ENST00000419271 1356 ntBASIC3.69□□□□□ -1.82
LRRC53A6NM62 RN7SKP280-201ENST00000364196 304 ntBASIC3.69□□□□□ -1.82
LRRC53A6NM62 RNA5SP515-201ENST00000364570 118 ntBASIC3.69□□□□□ -1.82
LRRC53A6NM62 SNORD6-201ENST00000365444 73 ntBASIC3.69□□□□□ -1.82
LRRC53A6NM62 RPL7P25-201ENST00000404151 721 ntBASIC3.69□□□□□ -1.82
LRRC53A6NM62 RPS3AP24-201ENST00000407896 734 ntBASIC3.69□□□□□ -1.82
LRRC53A6NM62 AC126124.2-201ENST00000413542 321 ntBASIC3.69□□□□□ -1.82
LRRC53A6NM62 RPS7P13-201ENST00000413955 498 ntBASIC3.69□□□□□ -1.82
LRRC53A6NM62 AL356968.1-201ENST00000416622 474 ntBASIC3.69□□□□□ -1.82
LRRC53A6NM62 USP9YP13-201ENST00000417797 480 ntBASIC3.69□□□□□ -1.82
LRRC53A6NM62 RPL31P12-201ENST00000422587 358 ntBASIC3.69□□□□□ -1.82
LRRC53A6NM62 AC010153.1-201ENST00000432862 727 ntBASIC3.69□□□□□ -1.82
LRRC53A6NM62 VDAC1P3-201ENST00000434069 851 ntBASIC3.69□□□□□ -1.82
LRRC53A6NM62 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.69□□□□□ -1.82
LRRC53A6NM62 RPL22P17-201ENST00000438729 315 ntBASIC3.69□□□□□ -1.82
LRRC53A6NM62 AC092641.1-201ENST00000440229 772 ntBASIC3.69□□□□□ -1.82
LRRC53A6NM62 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.69□□□□□ -1.82
LRRC53A6NM62 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.69□□□□□ -1.82
LRRC53A6NM62 AC008264.1-201ENST00000447612 367 ntBASIC3.69□□□□□ -1.82
LRRC53A6NM62 MTND1P9-201ENST00000453775 944 ntBASIC3.69□□□□□ -1.82
LRRC53A6NM62 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.69□□□□□ -1.82
LRRC53A6NM62 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.69□□□□□ -1.82
LRRC53A6NM62 snoU13.4-201ENST00000458916 104 ntBASIC3.69□□□□□ -1.82
LRRC53A6NM62 RNA5SP269-201ENST00000459032 137 ntBASIC3.69□□□□□ -1.82
LRRC53A6NM62 RPL23AP67-201ENST00000465341 474 ntBASIC3.69□□□□□ -1.82
LRRC53A6NM62 MTND4LP3-201ENST00000468320 276 ntBASIC3.69□□□□□ -1.82
LRRC53A6NM62 RPS4XP22-201ENST00000480755 780 ntBASIC3.69□□□□□ -1.82
LRRC53A6NM62 AC055855.1-201ENST00000489563 579 ntBASIC3.69□□□□□ -1.82
LRRC53A6NM62 AC010424.1-201ENST00000506336 297 ntBASIC3.69□□□□□ -1.82
LRRC53A6NM62 MLLT10P2-201ENST00000506434 249 ntBASIC3.69□□□□□ -1.82
LRRC53A6NM62 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.69□□□□□ -1.82
LRRC53A6NM62 RN7SKP21-201ENST00000516503 220 ntBASIC3.69□□□□□ -1.82
LRRC53A6NM62 SNRPGP16-201ENST00000533275 226 ntBASIC3.69□□□□□ -1.82
LRRC53A6NM62 AL133271.1-201ENST00000538229 291 ntBASIC3.69□□□□□ -1.82
LRRC53A6NM62 AC125611.2-201ENST00000551907 647 ntBASIC3.69□□□□□ -1.82
LRRC53A6NM62 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.69□□□□□ -1.82
LRRC53A6NM62 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.69□□□□□ -1.82
LRRC53A6NM62 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.69□□□□□ -1.82
LRRC53A6NM62 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.69□□□□□ -1.82
LRRC53A6NM62 RN7SKP299-201ENST00000606679 301 ntBASIC3.69□□□□□ -1.82
LRRC53A6NM62 AL450472.3-201ENST00000615578 367 ntBASIC3.69□□□□□ -1.82
LRRC53A6NM62 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.69□□□□□ -1.82
LRRC53A6NM62 AL590240.3-201ENST00000621416 943 ntBASIC3.69□□□□□ -1.82
LRRC53A6NM62 AL360181.4-201ENST00000621752 134 ntBASIC3.69□□□□□ -1.82
LRRC53A6NM62 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
LRRC53A6NM62 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
LRRC53A6NM62 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
LRRC53A6NM62 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
LRRC53A6NM62 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
LRRC53A6NM62 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.68□□□□□ -1.82
LRRC53A6NM62 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
LRRC53A6NM62 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.68□□□□□ -1.82
LRRC53A6NM62 FGF7P2-201ENST00000332473 296 ntBASIC3.68□□□□□ -1.82
LRRC53A6NM62 RNA5SP197-201ENST00000363357 119 ntBASIC3.68□□□□□ -1.82
LRRC53A6NM62 RPL21P17-201ENST00000397467 475 ntBASIC3.68□□□□□ -1.82
LRRC53A6NM62 Y_RNA.608-201ENST00000410647 95 ntBASIC3.68□□□□□ -1.82
LRRC53A6NM62 AC093578.1-201ENST00000415219 368 ntBASIC3.68□□□□□ -1.82
LRRC53A6NM62 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.68□□□□□ -1.82
LRRC53A6NM62 FTH1P1-201ENST00000437933 532 ntBASIC3.68□□□□□ -1.82
LRRC53A6NM62 ST13P20-201ENST00000447996 1065 ntBASIC3.68□□□□□ -1.82
LRRC53A6NM62 TPT1P14-201ENST00000448018 505 ntBASIC3.68□□□□□ -1.82
LRRC53A6NM62 MTND1P29-201ENST00000448112 647 ntBASIC3.68□□□□□ -1.82
LRRC53A6NM62 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.68□□□□□ -1.82
LRRC53A6NM62 AC103987.1-201ENST00000473394 348 ntBASIC3.68□□□□□ -1.82
LRRC53A6NM62 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.68□□□□□ -1.82
LRRC53A6NM62 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.68□□□□□ -1.82
LRRC53A6NM62 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.68□□□□□ -1.82
LRRC53A6NM62 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.68□□□□□ -1.82
LRRC53A6NM62 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.68□□□□□ -1.82
LRRC53A6NM62 AP000907.2-201ENST00000530827 353 ntBASIC3.68□□□□□ -1.82
LRRC53A6NM62 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.68□□□□□ -1.82
LRRC53A6NM62 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
LRRC53A6NM62 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.68□□□□□ -1.82
LRRC53A6NM62 AC123904.2-201ENST00000548059 300 ntBASIC3.68□□□□□ -1.82
LRRC53A6NM62 OR4T1P-201ENST00000554933 911 ntBASIC3.68□□□□□ -1.82
LRRC53A6NM62 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.68□□□□□ -1.82
LRRC53A6NM62 MIR3186-201ENST00000577404 85 ntBASIC3.68□□□□□ -1.82
LRRC53A6NM62 MIR3160-1-201ENST00000577972 85 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms