Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 AP003497.1-201ENST00000528472 562 ntBASIC3.96□□□□□ -1.78
TCRBV5S1A1TA0A578 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.96□□□□□ -1.78
TCRBV5S1A1TA0A578 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
TCRBV5S1A1TA0A578 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.96□□□□□ -1.78
TCRBV5S1A1TA0A578 OR8R1P-201ENST00000543943 764 ntBASIC3.96□□□□□ -1.78
TCRBV5S1A1TA0A578 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.96□□□□□ -1.78
TCRBV5S1A1TA0A578 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.96□□□□□ -1.78
TCRBV5S1A1TA0A578 AC087499.8-201ENST00000578406 226 ntBASIC3.96□□□□□ -1.78
TCRBV5S1A1TA0A578 AC090616.5-202ENST00000582111 297 ntBASIC3.96□□□□□ -1.78
TCRBV5S1A1TA0A578 AC053481.4-201ENST00000583164 216 ntBASIC3.96□□□□□ -1.78
TCRBV5S1A1TA0A578 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC3.96□□□□□ -1.78
TCRBV5S1A1TA0A578 YWHAQP7-201ENST00000603536 658 ntBASIC3.96□□□□□ -1.78
TCRBV5S1A1TA0A578 BNIP3P9-201ENST00000603714 553 ntBASIC3.96□□□□□ -1.78
TCRBV5S1A1TA0A578 AC007621.1-201ENST00000604544 437 ntBASIC3.96□□□□□ -1.78
TCRBV5S1A1TA0A578 AC093788.1-201ENST00000609356 927 ntBASIC3.96□□□□□ -1.78
TCRBV5S1A1TA0A578 AC068831.8-201ENST00000620171 435 ntBASIC3.96□□□□□ -1.78
TCRBV5S1A1TA0A578 AP003122.6-201ENST00000623831 495 ntBASIC3.96□□□□□ -1.78
TCRBV5S1A1TA0A578 MIR3662-201ENST00000637030 95 ntBASIC3.96□□□□□ -1.78
TCRBV5S1A1TA0A578 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
TCRBV5S1A1TA0A578 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.96□□□□□ -1.78
TCRBV5S1A1TA0A578 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
TCRBV5S1A1TA0A578 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
TCRBV5S1A1TA0A578 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
TCRBV5S1A1TA0A578 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
TCRBV5S1A1TA0A578 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TCRBV5S1A1TA0A578 AC093535.2-201ENST00000624769 2326 ntBASIC3.95□□□□□ -1.78
TCRBV5S1A1TA0A578 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
TCRBV5S1A1TA0A578 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TCRBV5S1A1TA0A578 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.95□□□□□ -1.78
TCRBV5S1A1TA0A578 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
TCRBV5S1A1TA0A578 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TCRBV5S1A1TA0A578 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
TCRBV5S1A1TA0A578 NMD3P1-201ENST00000439704 1488 ntBASIC3.95□□□□□ -1.78
TCRBV5S1A1TA0A578 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TCRBV5S1A1TA0A578 CBX3P1-201ENST00000325243 554 ntBASIC3.95□□□□□ -1.78
TCRBV5S1A1TA0A578 RNU6-1120P-201ENST00000362988 108 ntBASIC3.95□□□□□ -1.78
TCRBV5S1A1TA0A578 RNU6-169P-201ENST00000365336 107 ntBASIC3.95□□□□□ -1.78
TCRBV5S1A1TA0A578 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.95□□□□□ -1.78
TCRBV5S1A1TA0A578 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.95□□□□□ -1.78
TCRBV5S1A1TA0A578 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
TCRBV5S1A1TA0A578 RNU1-39P-201ENST00000383897 165 ntBASIC3.95□□□□□ -1.78
TCRBV5S1A1TA0A578 HSPE1P8-201ENST00000406997 288 ntBASIC3.95□□□□□ -1.78
TCRBV5S1A1TA0A578 SNORA3.3-201ENST00000408712 125 ntBASIC3.95□□□□□ -1.78
TCRBV5S1A1TA0A578 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.95□□□□□ -1.78
TCRBV5S1A1TA0A578 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.95□□□□□ -1.78
TCRBV5S1A1TA0A578 RPS15AP12-201ENST00000419498 388 ntBASIC3.95□□□□□ -1.78
TCRBV5S1A1TA0A578 ELOCP4-201ENST00000420090 333 ntBASIC3.95□□□□□ -1.78
TCRBV5S1A1TA0A578 AC008065.1-201ENST00000428525 348 ntBASIC3.95□□□□□ -1.78
TCRBV5S1A1TA0A578 AC091390.1-201ENST00000433904 331 ntBASIC3.95□□□□□ -1.78
TCRBV5S1A1TA0A578 NDUFB1P1-201ENST00000435191 180 ntBASIC3.95□□□□□ -1.78
TCRBV5S1A1TA0A578 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
TCRBV5S1A1TA0A578 CALM1P1-201ENST00000442082 433 ntBASIC3.95□□□□□ -1.78
TCRBV5S1A1TA0A578 AC006480.1-201ENST00000449887 378 ntBASIC3.95□□□□□ -1.78
TCRBV5S1A1TA0A578 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.95□□□□□ -1.78
TCRBV5S1A1TA0A578 AC087385.1-201ENST00000475062 312 ntBASIC3.95□□□□□ -1.78
TCRBV5S1A1TA0A578 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.95□□□□□ -1.78
TCRBV5S1A1TA0A578 AC025465.4-201ENST00000513422 638 ntBASIC3.95□□□□□ -1.78
TCRBV5S1A1TA0A578 RNU6-507P-201ENST00000516045 100 ntBASIC3.95□□□□□ -1.78
TCRBV5S1A1TA0A578 RN7SKP209-201ENST00000516888 304 ntBASIC3.95□□□□□ -1.78
TCRBV5S1A1TA0A578 RN7SKP277-201ENST00000516895 283 ntBASIC3.95□□□□□ -1.78
TCRBV5S1A1TA0A578 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.95□□□□□ -1.78
TCRBV5S1A1TA0A578 AC022695.1-201ENST00000522089 237 ntBASIC3.95□□□□□ -1.78
TCRBV5S1A1TA0A578 AC007991.1-201ENST00000522680 631 ntBASIC3.95□□□□□ -1.78
TCRBV5S1A1TA0A578 AC022616.3-201ENST00000523940 148 ntBASIC3.95□□□□□ -1.78
TCRBV5S1A1TA0A578 AP003072.2-201ENST00000527756 676 ntBASIC3.95□□□□□ -1.78
TCRBV5S1A1TA0A578 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.95□□□□□ -1.78
TCRBV5S1A1TA0A578 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.95□□□□□ -1.78
TCRBV5S1A1TA0A578 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.95□□□□□ -1.78
TCRBV5S1A1TA0A578 FGF7P1-201ENST00000582820 288 ntBASIC3.95□□□□□ -1.78
TCRBV5S1A1TA0A578 UBE2L4-201ENST00000587688 464 ntBASIC3.95□□□□□ -1.78
TCRBV5S1A1TA0A578 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.95□□□□□ -1.78
TCRBV5S1A1TA0A578 AC004853.1-201ENST00000604902 698 ntBASIC3.95□□□□□ -1.78
TCRBV5S1A1TA0A578 OR6R2P-201ENST00000609216 300 ntBASIC3.95□□□□□ -1.78
TCRBV5S1A1TA0A578 AL354798.1-201ENST00000622505 329 ntBASIC3.95□□□□□ -1.78
TCRBV5S1A1TA0A578 AL158801.5-201ENST00000623123 465 ntBASIC3.95□□□□□ -1.78
TCRBV5S1A1TA0A578 AC015908.5-201ENST00000623289 343 ntBASIC3.95□□□□□ -1.78
TCRBV5S1A1TA0A578 FER-210ENST00000628534 558 ntTSL 5 BASIC3.95□□□□□ -1.78
TCRBV5S1A1TA0A578 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.95□□□□□ -1.78
TCRBV5S1A1TA0A578 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
TCRBV5S1A1TA0A578 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
TCRBV5S1A1TA0A578 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.95□□□□□ -1.78
TCRBV5S1A1TA0A578 ZNF734P-201ENST00000419494 1534 ntBASIC3.95□□□□□ -1.78
TCRBV5S1A1TA0A578 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.95□□□□□ -1.78
TCRBV5S1A1TA0A578 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.95□□□□□ -1.78
TCRBV5S1A1TA0A578 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
TCRBV5S1A1TA0A578 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.94□□□□□ -1.78
TCRBV5S1A1TA0A578 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.94□□□□□ -1.78
TCRBV5S1A1TA0A578 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.94□□□□□ -1.78
TCRBV5S1A1TA0A578 RNU6-1097P-201ENST00000363586 107 ntBASIC3.94□□□□□ -1.78
TCRBV5S1A1TA0A578 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
TCRBV5S1A1TA0A578 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
TCRBV5S1A1TA0A578 RPL7P60-201ENST00000397636 735 ntBASIC3.94□□□□□ -1.78
TCRBV5S1A1TA0A578 RPS4XP8-201ENST00000402039 771 ntBASIC3.94□□□□□ -1.78
TCRBV5S1A1TA0A578 HSPD1P16-201ENST00000402302 394 ntBASIC3.94□□□□□ -1.78
TCRBV5S1A1TA0A578 RNU2-41P-201ENST00000410991 178 ntBASIC3.94□□□□□ -1.78
TCRBV5S1A1TA0A578 RAB28P1-201ENST00000411517 641 ntBASIC3.94□□□□□ -1.78
TCRBV5S1A1TA0A578 RPL21P111-201ENST00000418453 477 ntBASIC3.94□□□□□ -1.78
TCRBV5S1A1TA0A578 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.94□□□□□ -1.78
TCRBV5S1A1TA0A578 SNRPEP10-201ENST00000420249 274 ntBASIC3.94□□□□□ -1.78
TCRBV5S1A1TA0A578 AC245054.1-201ENST00000420944 258 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms