Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 RPL31P50-201ENST00000471002 296 ntBASIC2.93□□□□□ -1.94
SMIM28A0A1B0GU29 RN7SL432P-201ENST00000484057 298 ntBASIC2.93□□□□□ -1.94
SMIM28A0A1B0GU29 AC091951.3-201ENST00000504093 246 ntBASIC2.93□□□□□ -1.94
SMIM28A0A1B0GU29 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.93□□□□□ -1.94
SMIM28A0A1B0GU29 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.93□□□□□ -1.94
SMIM28A0A1B0GU29 AC006445.2-201ENST00000510061 472 ntBASIC2.93□□□□□ -1.94
SMIM28A0A1B0GU29 SNORA31.21-201ENST00000517180 77 ntBASIC2.93□□□□□ -1.94
SMIM28A0A1B0GU29 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.93□□□□□ -1.94
SMIM28A0A1B0GU29 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.93□□□□□ -1.94
SMIM28A0A1B0GU29 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SMIM28A0A1B0GU29 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.93□□□□□ -1.94
SMIM28A0A1B0GU29 MIR4637-201ENST00000582405 84 ntBASIC2.93□□□□□ -1.94
SMIM28A0A1B0GU29 MIR3605-201ENST00000583214 100 ntBASIC2.93□□□□□ -1.94
SMIM28A0A1B0GU29 AC091057.2-201ENST00000602594 792 ntBASIC2.93□□□□□ -1.94
SMIM28A0A1B0GU29 AC103881.1-201ENST00000603476 538 ntBASIC2.93□□□□□ -1.94
SMIM28A0A1B0GU29 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.93□□□□□ -1.94
SMIM28A0A1B0GU29 AC021749.1-201ENST00000604322 607 ntBASIC2.93□□□□□ -1.94
SMIM28A0A1B0GU29 DPRXP5-201ENST00000604662 539 ntBASIC2.93□□□□□ -1.94
SMIM28A0A1B0GU29 AC008277.2-201ENST00000605196 797 ntBASIC2.93□□□□□ -1.94
SMIM28A0A1B0GU29 AC128687.1-201ENST00000605304 619 ntBASIC2.93□□□□□ -1.94
SMIM28A0A1B0GU29 AC006386.1-201ENST00000619436 415 ntBASIC2.93□□□□□ -1.94
SMIM28A0A1B0GU29 AL353748.2-201ENST00000622148 471 ntBASIC2.93□□□□□ -1.94
SMIM28A0A1B0GU29 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.93□□□□□ -1.94
SMIM28A0A1B0GU29 AC116618.1-201ENST00000634617 774 ntBASIC2.93□□□□□ -1.94
SMIM28A0A1B0GU29 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SMIM28A0A1B0GU29 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SMIM28A0A1B0GU29 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.93□□□□□ -1.94
SMIM28A0A1B0GU29 AC005183.1-201ENST00000603687 1979 ntBASIC2.92□□□□□ -1.94
SMIM28A0A1B0GU29 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.92□□□□□ -1.94
SMIM28A0A1B0GU29 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC2.92□□□□□ -1.94
SMIM28A0A1B0GU29 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
SMIM28A0A1B0GU29 RNU6-50P-201ENST00000362356 103 ntBASIC2.92□□□□□ -1.94
SMIM28A0A1B0GU29 RNU6-859P-201ENST00000362728 107 ntBASIC2.92□□□□□ -1.94
SMIM28A0A1B0GU29 MIR34A-201ENST00000385130 110 ntBASIC2.92□□□□□ -1.94
SMIM28A0A1B0GU29 AL356057.3-201ENST00000402607 340 ntBASIC2.92□□□□□ -1.94
SMIM28A0A1B0GU29 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.92□□□□□ -1.94
SMIM28A0A1B0GU29 RNA5SP129-201ENST00000410276 118 ntBASIC2.92□□□□□ -1.94
SMIM28A0A1B0GU29 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.92□□□□□ -1.94
SMIM28A0A1B0GU29 AL592310.1-201ENST00000414330 671 ntBASIC2.92□□□□□ -1.94
SMIM28A0A1B0GU29 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.92□□□□□ -1.94
SMIM28A0A1B0GU29 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC2.92□□□□□ -1.94
SMIM28A0A1B0GU29 PSMA6P3-201ENST00000428242 164 ntBASIC2.92□□□□□ -1.94
SMIM28A0A1B0GU29 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.92□□□□□ -1.94
SMIM28A0A1B0GU29 MTCO2P25-201ENST00000447065 681 ntBASIC2.92□□□□□ -1.94
SMIM28A0A1B0GU29 PTENP1-201ENST00000447117 1215 ntBASIC2.92□□□□□ -1.94
SMIM28A0A1B0GU29 RPS27AP1-201ENST00000475545 471 ntBASIC2.92□□□□□ -1.94
SMIM28A0A1B0GU29 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.92□□□□□ -1.94
SMIM28A0A1B0GU29 AC020699.1-201ENST00000505161 445 ntBASIC2.92□□□□□ -1.94
SMIM28A0A1B0GU29 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.92□□□□□ -1.94
SMIM28A0A1B0GU29 RPL23AP94-201ENST00000512518 302 ntBASIC2.92□□□□□ -1.94
SMIM28A0A1B0GU29 AC006499.2-201ENST00000513470 337 ntBASIC2.92□□□□□ -1.94
SMIM28A0A1B0GU29 RPL12P22-201ENST00000519073 490 ntBASIC2.92□□□□□ -1.94
SMIM28A0A1B0GU29 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.92□□□□□ -1.94
SMIM28A0A1B0GU29 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.92□□□□□ -1.94
SMIM28A0A1B0GU29 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC2.92□□□□□ -1.94
SMIM28A0A1B0GU29 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC2.92□□□□□ -1.94
SMIM28A0A1B0GU29 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC2.92□□□□□ -1.94
SMIM28A0A1B0GU29 AC055876.1-202ENST00000567053 138 ntBASIC2.92□□□□□ -1.94
SMIM28A0A1B0GU29 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.92□□□□□ -1.94
SMIM28A0A1B0GU29 MIR4474-201ENST00000579189 78 ntBASIC2.92□□□□□ -1.94
SMIM28A0A1B0GU29 BNIP3P26-201ENST00000600827 554 ntBASIC2.92□□□□□ -1.94
SMIM28A0A1B0GU29 NRBF2P5-201ENST00000603087 788 ntBASIC2.92□□□□□ -1.94
SMIM28A0A1B0GU29 DUXAP3-201ENST00000603616 594 ntBASIC2.92□□□□□ -1.94
SMIM28A0A1B0GU29 AC080013.3-201ENST00000606839 578 ntBASIC2.92□□□□□ -1.94
SMIM28A0A1B0GU29 AC005046.1-201ENST00000608515 625 ntBASIC2.92□□□□□ -1.94
SMIM28A0A1B0GU29 AL450489.1-201ENST00000612071 468 ntBASIC2.92□□□□□ -1.94
SMIM28A0A1B0GU29 AC243773.3-201ENST00000613270 256 ntBASIC2.92□□□□□ -1.94
SMIM28A0A1B0GU29 AC025588.4-201ENST00000615802 908 ntBASIC2.92□□□□□ -1.94
SMIM28A0A1B0GU29 AC013470.4-201ENST00000619978 986 ntBASIC2.92□□□□□ -1.94
SMIM28A0A1B0GU29 AC244517.1-201ENST00000606030 2086 ntBASIC2.92□□□□□ -1.94
SMIM28A0A1B0GU29 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SMIM28A0A1B0GU29 MTND5P19-201ENST00000424872 1794 ntBASIC2.92□□□□□ -1.94
SMIM28A0A1B0GU29 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.92□□□□□ -1.94
SMIM28A0A1B0GU29 AL136360.1-201ENST00000503377 1900 ntBASIC2.91□□□□□ -1.94
SMIM28A0A1B0GU29 AC002546.1-201ENST00000588041 2504 ntBASIC2.91□□□□□ -1.94
SMIM28A0A1B0GU29 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
SMIM28A0A1B0GU29 TAB3P1-202ENST00000452645 1634 ntBASIC2.91□□□□□ -1.94
SMIM28A0A1B0GU29 RNU6-343P-201ENST00000364709 104 ntBASIC2.91□□□□□ -1.94
SMIM28A0A1B0GU29 SNORA72.3-201ENST00000365074 132 ntBASIC2.91□□□□□ -1.94
SMIM28A0A1B0GU29 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.91□□□□□ -1.94
SMIM28A0A1B0GU29 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
SMIM28A0A1B0GU29 Y_RNA.465-201ENST00000384293 102 ntBASIC2.91□□□□□ -1.94
SMIM28A0A1B0GU29 SNORD51-201ENST00000384320 80 ntBASIC2.91□□□□□ -1.94
SMIM28A0A1B0GU29 MIR196B-201ENST00000384852 84 ntBASIC2.91□□□□□ -1.94
SMIM28A0A1B0GU29 RPS4XP8-201ENST00000402039 771 ntBASIC2.91□□□□□ -1.94
SMIM28A0A1B0GU29 RNU2-15P-201ENST00000410692 191 ntBASIC2.91□□□□□ -1.94
SMIM28A0A1B0GU29 RAD23BP2-201ENST00000416003 1207 ntBASIC2.91□□□□□ -1.94
SMIM28A0A1B0GU29 MRPL50P2-201ENST00000416821 482 ntBASIC2.91□□□□□ -1.94
SMIM28A0A1B0GU29 AIMP1P1-201ENST00000418670 937 ntBASIC2.91□□□□□ -1.94
SMIM28A0A1B0GU29 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.91□□□□□ -1.94
SMIM28A0A1B0GU29 AL049610.1-201ENST00000423374 372 ntBASIC2.91□□□□□ -1.94
SMIM28A0A1B0GU29 ARL5AP4-201ENST00000430731 512 ntBASIC2.91□□□□□ -1.94
SMIM28A0A1B0GU29 ATP5F1P1-201ENST00000433775 569 ntBASIC2.91□□□□□ -1.94
SMIM28A0A1B0GU29 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.91□□□□□ -1.94
SMIM28A0A1B0GU29 MTND2P19-201ENST00000449129 1012 ntBASIC2.91□□□□□ -1.94
SMIM28A0A1B0GU29 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.91□□□□□ -1.94
SMIM28A0A1B0GU29 AC012181.1-201ENST00000479895 423 ntBASIC2.91□□□□□ -1.94
SMIM28A0A1B0GU29 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.91□□□□□ -1.94
SMIM28A0A1B0GU29 AC079395.1-201ENST00000510981 262 ntBASIC2.91□□□□□ -1.94
SMIM28A0A1B0GU29 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms