Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.36□□□□□ -1.87
PCDHGA1Q9Y5H4 AC091862.1-201ENST00000438016 1100 ntBASIC3.36□□□□□ -1.87
PCDHGA1Q9Y5H4 SNRPEP7-201ENST00000438350 220 ntBASIC3.36□□□□□ -1.87
PCDHGA1Q9Y5H4 AL590664.1-201ENST00000448065 339 ntBASIC3.36□□□□□ -1.87
PCDHGA1Q9Y5H4 MTCO3P16-201ENST00000454456 754 ntBASIC3.36□□□□□ -1.87
PCDHGA1Q9Y5H4 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.36□□□□□ -1.87
PCDHGA1Q9Y5H4 RPL21P8-201ENST00000465083 535 ntBASIC3.36□□□□□ -1.87
PCDHGA1Q9Y5H4 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.36□□□□□ -1.87
PCDHGA1Q9Y5H4 AC108860.1-201ENST00000484521 383 ntBASIC3.36□□□□□ -1.87
PCDHGA1Q9Y5H4 TRBV12-2-201ENST00000489763 344 ntBASIC3.36□□□□□ -1.87
PCDHGA1Q9Y5H4 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.36□□□□□ -1.87
PCDHGA1Q9Y5H4 CBX3P3-201ENST00000508108 532 ntBASIC3.36□□□□□ -1.87
PCDHGA1Q9Y5H4 AC093281.2-201ENST00000510153 597 ntBASIC3.36□□□□□ -1.87
PCDHGA1Q9Y5H4 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.36□□□□□ -1.87
PCDHGA1Q9Y5H4 AC093677.1-201ENST00000514414 678 ntBASIC3.36□□□□□ -1.87
PCDHGA1Q9Y5H4 RNU6-150P-201ENST00000516237 95 ntBASIC3.36□□□□□ -1.87
PCDHGA1Q9Y5H4 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
PCDHGA1Q9Y5H4 AC023538.1-201ENST00000534576 736 ntBASIC3.36□□□□□ -1.87
PCDHGA1Q9Y5H4 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.36□□□□□ -1.87
PCDHGA1Q9Y5H4 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.36□□□□□ -1.87
PCDHGA1Q9Y5H4 AC006504.3-201ENST00000586818 523 ntBASIC3.36□□□□□ -1.87
PCDHGA1Q9Y5H4 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.36□□□□□ -1.87
PCDHGA1Q9Y5H4 CKS1BP3-201ENST00000600888 237 ntBASIC3.36□□□□□ -1.87
PCDHGA1Q9Y5H4 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC3.36□□□□□ -1.87
PCDHGA1Q9Y5H4 AL136981.2-201ENST00000617319 734 ntBASIC3.36□□□□□ -1.87
PCDHGA1Q9Y5H4 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.36□□□□□ -1.87
PCDHGA1Q9Y5H4 AC091905.1-201ENST00000624400 311 ntBASIC3.36□□□□□ -1.87
PCDHGA1Q9Y5H4 MAPK10-322ENST00000641485 4530 ntBASIC3.36□□□□□ -1.87
PCDHGA1Q9Y5H4 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.36□□□□□ -1.87
PCDHGA1Q9Y5H4 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
PCDHGA1Q9Y5H4 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
PCDHGA1Q9Y5H4 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PCDHGA1Q9Y5H4 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.35□□□□□ -1.87
PCDHGA1Q9Y5H4 RNA5SP374-201ENST00000362939 125 ntBASIC3.35□□□□□ -1.87
PCDHGA1Q9Y5H4 SNORA4.1-201ENST00000364263 144 ntBASIC3.35□□□□□ -1.87
PCDHGA1Q9Y5H4 SAR1AP2-201ENST00000392696 594 ntBASIC3.35□□□□□ -1.87
PCDHGA1Q9Y5H4 RPS4XP3-201ENST00000398541 413 ntBASIC3.35□□□□□ -1.87
PCDHGA1Q9Y5H4 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PCDHGA1Q9Y5H4 U3.42-201ENST00000408746 214 ntBASIC3.35□□□□□ -1.87
PCDHGA1Q9Y5H4 MIR1289-1-201ENST00000408836 144 ntBASIC3.35□□□□□ -1.87
PCDHGA1Q9Y5H4 RNU4-47P-201ENST00000410876 114 ntBASIC3.35□□□□□ -1.87
PCDHGA1Q9Y5H4 PIGPP2-201ENST00000411569 458 ntBASIC3.35□□□□□ -1.87
PCDHGA1Q9Y5H4 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
PCDHGA1Q9Y5H4 HSPE1P1-201ENST00000421494 318 ntBASIC3.35□□□□□ -1.87
PCDHGA1Q9Y5H4 AL590383.1-201ENST00000428602 75 ntBASIC3.35□□□□□ -1.87
PCDHGA1Q9Y5H4 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.35□□□□□ -1.87
PCDHGA1Q9Y5H4 MTCYBP45-201ENST00000435243 565 ntBASIC3.35□□□□□ -1.87
PCDHGA1Q9Y5H4 AL831737.1-201ENST00000441288 271 ntBASIC3.35□□□□□ -1.87
PCDHGA1Q9Y5H4 MTND5P14-201ENST00000441481 1267 ntBASIC3.35□□□□□ -1.87
PCDHGA1Q9Y5H4 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC3.35□□□□□ -1.87
PCDHGA1Q9Y5H4 TXNP1-201ENST00000441872 371 ntBASIC3.35□□□□□ -1.87
PCDHGA1Q9Y5H4 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.35□□□□□ -1.87
PCDHGA1Q9Y5H4 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.35□□□□□ -1.87
PCDHGA1Q9Y5H4 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.35□□□□□ -1.87
PCDHGA1Q9Y5H4 AC084357.1-201ENST00000473404 255 ntBASIC3.35□□□□□ -1.87
PCDHGA1Q9Y5H4 RPL30P14-201ENST00000482744 348 ntBASIC3.35□□□□□ -1.87
PCDHGA1Q9Y5H4 AC006483.1-201ENST00000487308 313 ntBASIC3.35□□□□□ -1.87
PCDHGA1Q9Y5H4 RPL21P13-201ENST00000488305 481 ntBASIC3.35□□□□□ -1.87
PCDHGA1Q9Y5H4 RN7SL504P-201ENST00000494496 287 ntBASIC3.35□□□□□ -1.87
PCDHGA1Q9Y5H4 AC020893.1-201ENST00000502452 580 ntBASIC3.35□□□□□ -1.87
PCDHGA1Q9Y5H4 AC147055.4-201ENST00000504399 745 ntBASIC3.35□□□□□ -1.87
PCDHGA1Q9Y5H4 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.35□□□□□ -1.87
PCDHGA1Q9Y5H4 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.35□□□□□ -1.87
PCDHGA1Q9Y5H4 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.35□□□□□ -1.87
PCDHGA1Q9Y5H4 AL133393.1-201ENST00000603277 287 ntBASIC3.35□□□□□ -1.87
PCDHGA1Q9Y5H4 AL596327.1-201ENST00000603629 213 ntBASIC3.35□□□□□ -1.87
PCDHGA1Q9Y5H4 AL133507.1-201ENST00000605269 557 ntBASIC3.35□□□□□ -1.87
PCDHGA1Q9Y5H4 AL450489.1-201ENST00000612071 468 ntBASIC3.35□□□□□ -1.87
PCDHGA1Q9Y5H4 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
PCDHGA1Q9Y5H4 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
PCDHGA1Q9Y5H4 AL732372.2-225ENST00000642124 456 ntBASIC3.35□□□□□ -1.87
PCDHGA1Q9Y5H4 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PCDHGA1Q9Y5H4 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.35□□□□□ -1.87
PCDHGA1Q9Y5H4 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
PCDHGA1Q9Y5H4 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
PCDHGA1Q9Y5H4 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
PCDHGA1Q9Y5H4 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.87
PCDHGA1Q9Y5H4 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
PCDHGA1Q9Y5H4 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
PCDHGA1Q9Y5H4 RNU6-343P-201ENST00000364709 104 ntBASIC3.34□□□□□ -1.87
PCDHGA1Q9Y5H4 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
PCDHGA1Q9Y5H4 AC119751.3-201ENST00000399720 670 ntBASIC3.34□□□□□ -1.87
PCDHGA1Q9Y5H4 BX323014.1-201ENST00000412876 237 ntBASIC3.34□□□□□ -1.87
PCDHGA1Q9Y5H4 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.34□□□□□ -1.87
PCDHGA1Q9Y5H4 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.34□□□□□ -1.87
PCDHGA1Q9Y5H4 USP9YP36-201ENST00000424581 829 ntBASIC3.34□□□□□ -1.87
PCDHGA1Q9Y5H4 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.34□□□□□ -1.87
PCDHGA1Q9Y5H4 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.34□□□□□ -1.87
PCDHGA1Q9Y5H4 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.34□□□□□ -1.87
PCDHGA1Q9Y5H4 EEF1E1P1-201ENST00000446998 430 ntBASIC3.34□□□□□ -1.87
PCDHGA1Q9Y5H4 AC140076.1-201ENST00000449897 361 ntBASIC3.34□□□□□ -1.87
PCDHGA1Q9Y5H4 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.34□□□□□ -1.87
PCDHGA1Q9Y5H4 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC3.34□□□□□ -1.87
PCDHGA1Q9Y5H4 BX322784.1-201ENST00000455793 1077 ntBASIC3.34□□□□□ -1.87
PCDHGA1Q9Y5H4 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.34□□□□□ -1.87
PCDHGA1Q9Y5H4 RN7SL594P-201ENST00000470590 287 ntBASIC3.34□□□□□ -1.87
PCDHGA1Q9Y5H4 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.34□□□□□ -1.87
PCDHGA1Q9Y5H4 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.34□□□□□ -1.87
PCDHGA1Q9Y5H4 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
PCDHGA1Q9Y5H4 RNA5SP216-201ENST00000516111 123 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 154.3 ms