Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.47□□□□□ -1.53
PCDHGA11Q9Y5H2 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC5.47□□□□□ -1.53
PCDHGA11Q9Y5H2 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC5.47□□□□□ -1.53
PCDHGA11Q9Y5H2 TRAV32-201ENST00000553993 340 ntBASIC5.47□□□□□ -1.53
PCDHGA11Q9Y5H2 AC008814.1-201ENST00000603797 406 ntBASIC5.47□□□□□ -1.53
PCDHGA11Q9Y5H2 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.47□□□□□ -1.53
PCDHGA11Q9Y5H2 AC064801.1-201ENST00000612025 407 ntBASIC5.47□□□□□ -1.53
PCDHGA11Q9Y5H2 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.47□□□□□ -1.53
PCDHGA11Q9Y5H2 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC5.47□□□□□ -1.53
PCDHGA11Q9Y5H2 AL512643.1-201ENST00000635735 524 ntBASIC5.47□□□□□ -1.53
PCDHGA11Q9Y5H2 AC005005.4-201ENST00000623789 16698 ntBASIC5.47□□□□□ -1.53
PCDHGA11Q9Y5H2 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
PCDHGA11Q9Y5H2 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PCDHGA11Q9Y5H2 OR4F13P-202ENST00000560066 2054 ntBASIC5.47□□□□□ -1.53
PCDHGA11Q9Y5H2 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PCDHGA11Q9Y5H2 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
PCDHGA11Q9Y5H2 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
PCDHGA11Q9Y5H2 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.47□□□□□ -1.53
PCDHGA11Q9Y5H2 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PCDHGA11Q9Y5H2 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PCDHGA11Q9Y5H2 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PCDHGA11Q9Y5H2 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.53
PCDHGA11Q9Y5H2 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
PCDHGA11Q9Y5H2 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
PCDHGA11Q9Y5H2 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
PCDHGA11Q9Y5H2 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
PCDHGA11Q9Y5H2 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
PCDHGA11Q9Y5H2 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
PCDHGA11Q9Y5H2 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
PCDHGA11Q9Y5H2 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PCDHGA11Q9Y5H2 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC5.46□□□□□ -1.54
PCDHGA11Q9Y5H2 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.46□□□□□ -1.54
PCDHGA11Q9Y5H2 RNU6-700P-201ENST00000391043 107 ntBASIC5.46□□□□□ -1.54
PCDHGA11Q9Y5H2 AC005042.1-201ENST00000393397 800 ntBASIC5.46□□□□□ -1.54
PCDHGA11Q9Y5H2 AC119751.6-201ENST00000416712 186 ntBASIC5.46□□□□□ -1.54
PCDHGA11Q9Y5H2 AL662874.1-201ENST00000426065 230 ntBASIC5.46□□□□□ -1.54
PCDHGA11Q9Y5H2 AC006946.1-201ENST00000429106 328 ntBASIC5.46□□□□□ -1.54
PCDHGA11Q9Y5H2 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.46□□□□□ -1.54
PCDHGA11Q9Y5H2 CEACAMP6-201ENST00000452007 574 ntBASIC5.46□□□□□ -1.54
PCDHGA11Q9Y5H2 NXT1P1-201ENST00000458481 316 ntBASIC5.46□□□□□ -1.54
PCDHGA11Q9Y5H2 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC5.46□□□□□ -1.54
PCDHGA11Q9Y5H2 AC114781.3-201ENST00000512083 142 ntBASIC5.46□□□□□ -1.54
PCDHGA11Q9Y5H2 APOOP4-201ENST00000513530 597 ntBASIC5.46□□□□□ -1.54
PCDHGA11Q9Y5H2 RNU6-397P-201ENST00000516226 104 ntBASIC5.46□□□□□ -1.54
PCDHGA11Q9Y5H2 RNU6-182P-201ENST00000516970 105 ntBASIC5.46□□□□□ -1.54
PCDHGA11Q9Y5H2 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.46□□□□□ -1.54
PCDHGA11Q9Y5H2 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.46□□□□□ -1.54
PCDHGA11Q9Y5H2 AC090517.1-201ENST00000569307 266 ntBASIC5.46□□□□□ -1.54
PCDHGA11Q9Y5H2 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.46□□□□□ -1.54
PCDHGA11Q9Y5H2 CPDP1-201ENST00000579660 283 ntBASIC5.46□□□□□ -1.54
PCDHGA11Q9Y5H2 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.46□□□□□ -1.54
PCDHGA11Q9Y5H2 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC5.46□□□□□ -1.54
PCDHGA11Q9Y5H2 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC5.46□□□□□ -1.54
PCDHGA11Q9Y5H2 MIR3976-201ENST00000606807 139 ntBASIC5.46□□□□□ -1.54
PCDHGA11Q9Y5H2 MIR1244-1-201ENST00000612829 85 ntBASIC5.46□□□□□ -1.54
PCDHGA11Q9Y5H2 MIR1244-3-201ENST00000635744 85 ntBASIC5.46□□□□□ -1.54
PCDHGA11Q9Y5H2 MIR1244-2-201ENST00000636449 85 ntBASIC5.46□□□□□ -1.54
PCDHGA11Q9Y5H2 MIR1244-4-202ENST00000636813 85 ntBASIC5.46□□□□□ -1.54
PCDHGA11Q9Y5H2 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.46□□□□□ -1.54
PCDHGA11Q9Y5H2 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.46□□□□□ -1.54
PCDHGA11Q9Y5H2 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.46□□□□□ -1.54
PCDHGA11Q9Y5H2 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
PCDHGA11Q9Y5H2 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
PCDHGA11Q9Y5H2 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.46□□□□□ -1.54
PCDHGA11Q9Y5H2 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
PCDHGA11Q9Y5H2 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.45□□□□□ -1.54
PCDHGA11Q9Y5H2 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PCDHGA11Q9Y5H2 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PCDHGA11Q9Y5H2 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PCDHGA11Q9Y5H2 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
PCDHGA11Q9Y5H2 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
PCDHGA11Q9Y5H2 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
PCDHGA11Q9Y5H2 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PCDHGA11Q9Y5H2 SNORA69.1-201ENST00000390904 137 ntBASIC5.45□□□□□ -1.54
PCDHGA11Q9Y5H2 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.45□□□□□ -1.54
PCDHGA11Q9Y5H2 RPS3AP2-201ENST00000407190 754 ntBASIC5.45□□□□□ -1.54
PCDHGA11Q9Y5H2 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.45□□□□□ -1.54
PCDHGA11Q9Y5H2 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC5.45□□□□□ -1.54
PCDHGA11Q9Y5H2 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.45□□□□□ -1.54
PCDHGA11Q9Y5H2 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.45□□□□□ -1.54
PCDHGA11Q9Y5H2 AC139712.2-201ENST00000424302 339 ntBASIC5.45□□□□□ -1.54
PCDHGA11Q9Y5H2 BX323845.3-201ENST00000428215 527 ntBASIC5.45□□□□□ -1.54
PCDHGA11Q9Y5H2 AC092423.1-201ENST00000430165 186 ntBASIC5.45□□□□□ -1.54
PCDHGA11Q9Y5H2 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC5.45□□□□□ -1.54
PCDHGA11Q9Y5H2 AL590664.1-201ENST00000448065 339 ntBASIC5.45□□□□□ -1.54
PCDHGA11Q9Y5H2 AC087588.1-201ENST00000462203 316 ntBASIC5.45□□□□□ -1.54
PCDHGA11Q9Y5H2 TRBVB-201ENST00000477100 408 ntBASIC5.45□□□□□ -1.54
PCDHGA11Q9Y5H2 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
PCDHGA11Q9Y5H2 AC025465.3-201ENST00000510570 311 ntBASIC5.45□□□□□ -1.54
PCDHGA11Q9Y5H2 MTND1P19-201ENST00000511780 315 ntBASIC5.45□□□□□ -1.54
PCDHGA11Q9Y5H2 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC5.45□□□□□ -1.54
PCDHGA11Q9Y5H2 MIR892C-201ENST00000516410 77 ntBASIC5.45□□□□□ -1.54
PCDHGA11Q9Y5H2 RNA5SP271-201ENST00000516700 88 ntBASIC5.45□□□□□ -1.54
PCDHGA11Q9Y5H2 SNORA70.20-201ENST00000516848 126 ntBASIC5.45□□□□□ -1.54
PCDHGA11Q9Y5H2 AP003733.2-201ENST00000529409 171 ntBASIC5.45□□□□□ -1.54
PCDHGA11Q9Y5H2 SMILR-201ENST00000533992 553 ntTSL 4 BASIC5.45□□□□□ -1.54
PCDHGA11Q9Y5H2 RRN3P3-201ENST00000549207 578 ntBASIC5.45□□□□□ -1.54
PCDHGA11Q9Y5H2 AL161713.1-201ENST00000555538 145 ntBASIC5.45□□□□□ -1.54
PCDHGA11Q9Y5H2 MIR1273C-201ENST00000578669 77 ntBASIC5.45□□□□□ -1.54
PCDHGA11Q9Y5H2 MIR4311-201ENST00000580794 100 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms