Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.33□□□□□ -2.2
UBE2D4Q9Y2X8 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC1.33□□□□□ -2.2
UBE2D4Q9Y2X8 AC009812.4-201ENST00000569134 1805 ntBASIC1.33□□□□□ -2.2
UBE2D4Q9Y2X8 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.32□□□□□ -2.2
UBE2D4Q9Y2X8 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
UBE2D4Q9Y2X8 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC1.32□□□□□ -2.2
UBE2D4Q9Y2X8 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.32□□□□□ -2.2
UBE2D4Q9Y2X8 U8.2-201ENST00000363156 134 ntBASIC1.32□□□□□ -2.2
UBE2D4Q9Y2X8 SNORA38-201ENST00000363946 132 ntBASIC1.32□□□□□ -2.2
UBE2D4Q9Y2X8 RNU6-234P-201ENST00000365229 104 ntBASIC1.32□□□□□ -2.2
UBE2D4Q9Y2X8 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC1.32□□□□□ -2.2
UBE2D4Q9Y2X8 AL023284.1-201ENST00000403956 276 ntBASIC1.32□□□□□ -2.2
UBE2D4Q9Y2X8 RNA5SP425-201ENST00000410336 112 ntBASIC1.32□□□□□ -2.2
UBE2D4Q9Y2X8 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
UBE2D4Q9Y2X8 AL356320.1-201ENST00000429616 163 ntBASIC1.32□□□□□ -2.2
UBE2D4Q9Y2X8 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
UBE2D4Q9Y2X8 RPL7P36-201ENST00000444633 681 ntBASIC1.32□□□□□ -2.2
UBE2D4Q9Y2X8 AC009237.8-201ENST00000445492 379 ntBASIC1.32□□□□□ -2.2
UBE2D4Q9Y2X8 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.32□□□□□ -2.2
UBE2D4Q9Y2X8 MTND2P8-201ENST00000450555 1025 ntBASIC1.32□□□□□ -2.2
UBE2D4Q9Y2X8 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.32□□□□□ -2.2
UBE2D4Q9Y2X8 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC1.32□□□□□ -2.2
UBE2D4Q9Y2X8 ATG12P2-201ENST00000456830 416 ntBASIC1.32□□□□□ -2.2
UBE2D4Q9Y2X8 snoU13.4-201ENST00000458916 104 ntBASIC1.32□□□□□ -2.2
UBE2D4Q9Y2X8 ANXA2P1-201ENST00000505539 926 ntBASIC1.32□□□□□ -2.2
UBE2D4Q9Y2X8 AC004062.1-201ENST00000509926 645 ntBASIC1.32□□□□□ -2.2
UBE2D4Q9Y2X8 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC1.32□□□□□ -2.2
UBE2D4Q9Y2X8 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC1.32□□□□□ -2.2
UBE2D4Q9Y2X8 AP001317.1-201ENST00000531194 960 ntBASIC1.32□□□□□ -2.2
UBE2D4Q9Y2X8 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
UBE2D4Q9Y2X8 MGST1-215ENST00000540056 546 ntTSL 3 BASIC1.32□□□□□ -2.2
UBE2D4Q9Y2X8 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.32□□□□□ -2.2
UBE2D4Q9Y2X8 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC1.32□□□□□ -2.2
UBE2D4Q9Y2X8 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.32□□□□□ -2.2
UBE2D4Q9Y2X8 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC1.32□□□□□ -2.2
UBE2D4Q9Y2X8 AC115085.1-201ENST00000588924 229 ntBASIC1.32□□□□□ -2.2
UBE2D4Q9Y2X8 AP004372.1-201ENST00000604842 844 ntBASIC1.32□□□□□ -2.2
UBE2D4Q9Y2X8 AC103710.1-201ENST00000610003 901 ntBASIC1.32□□□□□ -2.2
UBE2D4Q9Y2X8 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC1.32□□□□□ -2.2
UBE2D4Q9Y2X8 SDR42E1P2-201ENST00000614861 481 ntBASIC1.32□□□□□ -2.2
UBE2D4Q9Y2X8 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC1.32□□□□□ -2.2
UBE2D4Q9Y2X8 SDR42E1P4-201ENST00000620894 481 ntBASIC1.32□□□□□ -2.2
UBE2D4Q9Y2X8 AC244517.12-201ENST00000623581 663 ntBASIC1.32□□□□□ -2.2
UBE2D4Q9Y2X8 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC1.32□□□□□ -2.2
UBE2D4Q9Y2X8 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.32□□□□□ -2.2
UBE2D4Q9Y2X8 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
UBE2D4Q9Y2X8 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.32□□□□□ -2.2
UBE2D4Q9Y2X8 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.32□□□□□ -2.2
UBE2D4Q9Y2X8 SNORA3A-201ENST00000364113 130 ntBASIC1.31□□□□□ -2.2
UBE2D4Q9Y2X8 RNU6-461P-201ENST00000364195 107 ntBASIC1.31□□□□□ -2.2
UBE2D4Q9Y2X8 SNORA16.1-201ENST00000364597 132 ntBASIC1.31□□□□□ -2.2
UBE2D4Q9Y2X8 SNORA16B-201ENST00000364674 135 ntBASIC1.31□□□□□ -2.2
UBE2D4Q9Y2X8 AL121972.1-201ENST00000402023 252 ntBASIC1.31□□□□□ -2.2
UBE2D4Q9Y2X8 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.31□□□□□ -2.2
UBE2D4Q9Y2X8 RNU2-20P-201ENST00000410425 191 ntBASIC1.31□□□□□ -2.2
UBE2D4Q9Y2X8 RPL21P32-201ENST00000419877 477 ntBASIC1.31□□□□□ -2.2
UBE2D4Q9Y2X8 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.31□□□□□ -2.2
UBE2D4Q9Y2X8 COX6CP12-201ENST00000446748 202 ntBASIC1.31□□□□□ -2.2
UBE2D4Q9Y2X8 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.31□□□□□ -2.2
UBE2D4Q9Y2X8 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.31□□□□□ -2.2
UBE2D4Q9Y2X8 OR5H5P-201ENST00000503164 928 ntBASIC1.31□□□□□ -2.2
UBE2D4Q9Y2X8 RPL23AP94-201ENST00000512518 302 ntBASIC1.31□□□□□ -2.2
UBE2D4Q9Y2X8 SNORA31.23-201ENST00000517219 133 ntBASIC1.31□□□□□ -2.2
UBE2D4Q9Y2X8 BTF3P12-201ENST00000519620 469 ntBASIC1.31□□□□□ -2.2
UBE2D4Q9Y2X8 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.31□□□□□ -2.2
UBE2D4Q9Y2X8 MTND2P26-201ENST00000528255 1029 ntBASIC1.31□□□□□ -2.2
UBE2D4Q9Y2X8 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC1.31□□□□□ -2.2
UBE2D4Q9Y2X8 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.31□□□□□ -2.2
UBE2D4Q9Y2X8 AC090312.2-201ENST00000582687 378 ntBASIC1.31□□□□□ -2.2
UBE2D4Q9Y2X8 AC079089.3-201ENST00000603094 673 ntBASIC1.31□□□□□ -2.2
UBE2D4Q9Y2X8 AL096840.1-201ENST00000603287 93 ntBASIC1.31□□□□□ -2.2
UBE2D4Q9Y2X8 SNRPGP19-201ENST00000603826 189 ntBASIC1.31□□□□□ -2.2
UBE2D4Q9Y2X8 AL713998.2-201ENST00000604538 1198 ntBASIC1.31□□□□□ -2.2
UBE2D4Q9Y2X8 SNORD14A-201ENST00000606526 91 ntBASIC1.31□□□□□ -2.2
UBE2D4Q9Y2X8 AC107214.2-201ENST00000608204 634 ntBASIC1.31□□□□□ -2.2
UBE2D4Q9Y2X8 AC005332.10-201ENST00000612725 619 ntBASIC1.31□□□□□ -2.2
UBE2D4Q9Y2X8 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
UBE2D4Q9Y2X8 AC025016.1-201ENST00000616746 682 ntBASIC1.31□□□□□ -2.2
UBE2D4Q9Y2X8 AC018755.4-201ENST00000619715 454 ntBASIC1.31□□□□□ -2.2
UBE2D4Q9Y2X8 AC064859.1-201ENST00000624741 174 ntBASIC1.31□□□□□ -2.2
UBE2D4Q9Y2X8 MIR219B-201ENST00000637023 88 ntBASIC1.31□□□□□ -2.2
UBE2D4Q9Y2X8 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.31□□□□□ -2.2
UBE2D4Q9Y2X8 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC1.3□□□□□ -2.2
UBE2D4Q9Y2X8 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
UBE2D4Q9Y2X8 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.3□□□□□ -2.2
UBE2D4Q9Y2X8 RNU6-253P-201ENST00000384730 105 ntBASIC1.3□□□□□ -2.2
UBE2D4Q9Y2X8 MIR676-201ENST00000390702 67 ntBASIC1.3□□□□□ -2.2
UBE2D4Q9Y2X8 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
UBE2D4Q9Y2X8 RPS4XP3-201ENST00000398541 413 ntBASIC1.3□□□□□ -2.2
UBE2D4Q9Y2X8 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.3□□□□□ -2.2
UBE2D4Q9Y2X8 RN7SKP32-201ENST00000410167 303 ntBASIC1.3□□□□□ -2.2
UBE2D4Q9Y2X8 RPL31P63-201ENST00000422565 375 ntBASIC1.3□□□□□ -2.2
UBE2D4Q9Y2X8 AL445646.1-201ENST00000431784 216 ntBASIC1.3□□□□□ -2.2
UBE2D4Q9Y2X8 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.3□□□□□ -2.2
UBE2D4Q9Y2X8 RPL35AP22-201ENST00000436855 335 ntBASIC1.3□□□□□ -2.2
UBE2D4Q9Y2X8 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.3□□□□□ -2.2
UBE2D4Q9Y2X8 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC1.3□□□□□ -2.2
UBE2D4Q9Y2X8 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.3□□□□□ -2.2
UBE2D4Q9Y2X8 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.3□□□□□ -2.2
UBE2D4Q9Y2X8 SNORA31.20-201ENST00000517111 133 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms