Protein–RNA interactions for Protein: Q9UKV0

HDAC9, Histone deacetylase 9, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9Q9UKV0 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HDAC9Q9UKV0 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
HDAC9Q9UKV0 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
HDAC9Q9UKV0 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HDAC9Q9UKV0 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
HDAC9Q9UKV0 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HDAC9Q9UKV0 RN7SKP56-201ENST00000410513 331 ntBASIC4.49□□□□□ -1.69
HDAC9Q9UKV0 JKAMPP1-201ENST00000413804 919 ntBASIC4.49□□□□□ -1.69
HDAC9Q9UKV0 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC4.49□□□□□ -1.69
HDAC9Q9UKV0 AL356583.2-201ENST00000426536 280 ntBASIC4.49□□□□□ -1.69
HDAC9Q9UKV0 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC4.49□□□□□ -1.69
HDAC9Q9UKV0 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.49□□□□□ -1.69
HDAC9Q9UKV0 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.49□□□□□ -1.69
HDAC9Q9UKV0 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC4.49□□□□□ -1.69
HDAC9Q9UKV0 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC4.49□□□□□ -1.69
HDAC9Q9UKV0 RPL21P10-201ENST00000463521 490 ntBASIC4.49□□□□□ -1.69
HDAC9Q9UKV0 RPS4XP10-201ENST00000465034 731 ntBASIC4.49□□□□□ -1.69
HDAC9Q9UKV0 NDUFB4P9-201ENST00000511646 388 ntBASIC4.49□□□□□ -1.69
HDAC9Q9UKV0 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.49□□□□□ -1.69
HDAC9Q9UKV0 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.49□□□□□ -1.69
HDAC9Q9UKV0 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.49□□□□□ -1.69
HDAC9Q9UKV0 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.49□□□□□ -1.69
HDAC9Q9UKV0 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC4.49□□□□□ -1.69
HDAC9Q9UKV0 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.49□□□□□ -1.69
HDAC9Q9UKV0 AP005205.1-201ENST00000563503 508 ntBASIC4.49□□□□□ -1.69
HDAC9Q9UKV0 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HDAC9Q9UKV0 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
HDAC9Q9UKV0 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.49□□□□□ -1.69
HDAC9Q9UKV0 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.49□□□□□ -1.69
HDAC9Q9UKV0 AL137843.1-201ENST00000605078 385 ntBASIC4.49□□□□□ -1.69
HDAC9Q9UKV0 AC004492.1-201ENST00000607036 742 ntBASIC4.49□□□□□ -1.69
HDAC9Q9UKV0 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.49□□□□□ -1.69
HDAC9Q9UKV0 AC005332.10-201ENST00000612725 619 ntBASIC4.49□□□□□ -1.69
HDAC9Q9UKV0 AC073968.1-201ENST00000618594 637 ntBASIC4.49□□□□□ -1.69
HDAC9Q9UKV0 AL359740.1-201ENST00000624340 592 ntBASIC4.49□□□□□ -1.69
HDAC9Q9UKV0 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
HDAC9Q9UKV0 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.49□□□□□ -1.69
HDAC9Q9UKV0 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HDAC9Q9UKV0 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.48□□□□□ -1.69
HDAC9Q9UKV0 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
HDAC9Q9UKV0 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
HDAC9Q9UKV0 AP001350.1-201ENST00000601906 1524 ntBASIC4.48□□□□□ -1.69
HDAC9Q9UKV0 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HDAC9Q9UKV0 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.48□□□□□ -1.69
HDAC9Q9UKV0 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HDAC9Q9UKV0 RNU6-263P-201ENST00000363811 107 ntBASIC4.48□□□□□ -1.69
HDAC9Q9UKV0 MIR490-201ENST00000384865 128 ntBASIC4.48□□□□□ -1.69
HDAC9Q9UKV0 MTND4LP20-201ENST00000402379 270 ntBASIC4.48□□□□□ -1.69
HDAC9Q9UKV0 AL583834.1-201ENST00000406943 343 ntBASIC4.48□□□□□ -1.69
HDAC9Q9UKV0 RNA5SP306-201ENST00000411087 107 ntBASIC4.48□□□□□ -1.69
HDAC9Q9UKV0 MTCO1P17-201ENST00000411522 491 ntBASIC4.48□□□□□ -1.69
HDAC9Q9UKV0 HMGN1P14-201ENST00000412459 517 ntBASIC4.48□□□□□ -1.69
HDAC9Q9UKV0 MTATP6P27-201ENST00000416987 621 ntBASIC4.48□□□□□ -1.69
HDAC9Q9UKV0 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC4.48□□□□□ -1.69
HDAC9Q9UKV0 KCTD9P3-201ENST00000434597 1169 ntBASIC4.48□□□□□ -1.69
HDAC9Q9UKV0 AL022238.1-201ENST00000442557 355 ntBASIC4.48□□□□□ -1.69
HDAC9Q9UKV0 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.48□□□□□ -1.69
HDAC9Q9UKV0 HMGN2P7-201ENST00000456186 273 ntBASIC4.48□□□□□ -1.69
HDAC9Q9UKV0 SNORD42A-201ENST00000459584 64 ntBASIC4.48□□□□□ -1.69
HDAC9Q9UKV0 AC087312.1-201ENST00000471411 480 ntBASIC4.48□□□□□ -1.69
HDAC9Q9UKV0 AC104563.1-201ENST00000476147 376 ntBASIC4.48□□□□□ -1.69
HDAC9Q9UKV0 AC011825.1-201ENST00000484967 388 ntBASIC4.48□□□□□ -1.69
HDAC9Q9UKV0 RPL7P24-201ENST00000493052 752 ntBASIC4.48□□□□□ -1.69
HDAC9Q9UKV0 AF131216.2-201ENST00000512316 564 ntBASIC4.48□□□□□ -1.69
HDAC9Q9UKV0 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC4.48□□□□□ -1.69
HDAC9Q9UKV0 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC4.48□□□□□ -1.69
HDAC9Q9UKV0 RNU6-720P-201ENST00000516363 108 ntBASIC4.48□□□□□ -1.69
HDAC9Q9UKV0 RNU6-405P-201ENST00000516637 110 ntBASIC4.48□□□□□ -1.69
HDAC9Q9UKV0 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.48□□□□□ -1.69
HDAC9Q9UKV0 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.48□□□□□ -1.69
HDAC9Q9UKV0 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.48□□□□□ -1.69
HDAC9Q9UKV0 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.48□□□□□ -1.69
HDAC9Q9UKV0 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC4.48□□□□□ -1.69
HDAC9Q9UKV0 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC4.48□□□□□ -1.69
HDAC9Q9UKV0 NCAPGP2-201ENST00000557911 754 ntBASIC4.48□□□□□ -1.69
HDAC9Q9UKV0 MTND1P15-201ENST00000579262 949 ntBASIC4.48□□□□□ -1.69
HDAC9Q9UKV0 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.48□□□□□ -1.69
HDAC9Q9UKV0 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.48□□□□□ -1.69
HDAC9Q9UKV0 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HDAC9Q9UKV0 AC006023.2-201ENST00000609916 167 ntBASIC4.48□□□□□ -1.69
HDAC9Q9UKV0 Z99129.1-201ENST00000612510 255 ntBASIC4.48□□□□□ -1.69
HDAC9Q9UKV0 AC015540.1-201ENST00000615828 501 ntBASIC4.48□□□□□ -1.69
HDAC9Q9UKV0 AC099842.1-201ENST00000619919 596 ntBASIC4.48□□□□□ -1.69
HDAC9Q9UKV0 AL359715.5-201ENST00000623431 443 ntBASIC4.48□□□□□ -1.69
HDAC9Q9UKV0 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HDAC9Q9UKV0 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.48□□□□□ -1.69
HDAC9Q9UKV0 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.48□□□□□ -1.69
HDAC9Q9UKV0 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.48□□□□□ -1.69
HDAC9Q9UKV0 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HDAC9Q9UKV0 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HDAC9Q9UKV0 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
HDAC9Q9UKV0 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HDAC9Q9UKV0 LINC02471-203ENST00000641941 4752 ntBASIC4.47□□□□□ -1.69
HDAC9Q9UKV0 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.47□□□□□ -1.69
HDAC9Q9UKV0 RNU6-744P-201ENST00000365557 107 ntBASIC4.47□□□□□ -1.69
HDAC9Q9UKV0 RNU6-1316P-201ENST00000384242 108 ntBASIC4.47□□□□□ -1.69
HDAC9Q9UKV0 RNU6-297P-201ENST00000384636 107 ntBASIC4.47□□□□□ -1.69
HDAC9Q9UKV0 RNA5SP424-201ENST00000390988 115 ntBASIC4.47□□□□□ -1.69
HDAC9Q9UKV0 U3.29-201ENST00000391296 212 ntBASIC4.47□□□□□ -1.69
HDAC9Q9UKV0 RNA5SP120-201ENST00000410900 112 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms