Protein–RNA interactions for Protein: Q9P0V3

SH3BP4, SH3 domain-binding protein 4, humanhuman

Predictions only

Length 963 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP4Q9P0V3 RN7SKP177-201ENST00000410567 355 ntBASIC4.02□□□□□ -1.77
SH3BP4Q9P0V3 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.02□□□□□ -1.77
SH3BP4Q9P0V3 EI24P1-201ENST00000416584 867 ntBASIC4.02□□□□□ -1.77
SH3BP4Q9P0V3 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.02□□□□□ -1.77
SH3BP4Q9P0V3 AC012065.2-201ENST00000421295 375 ntBASIC4.02□□□□□ -1.77
SH3BP4Q9P0V3 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC4.02□□□□□ -1.77
SH3BP4Q9P0V3 EZH2P1-201ENST00000431167 291 ntBASIC4.02□□□□□ -1.77
SH3BP4Q9P0V3 AL606489.2-201ENST00000433886 234 ntBASIC4.02□□□□□ -1.77
SH3BP4Q9P0V3 HMGB3P12-201ENST00000438745 556 ntBASIC4.02□□□□□ -1.77
SH3BP4Q9P0V3 AP000926.1-201ENST00000479573 241 ntBASIC4.02□□□□□ -1.77
SH3BP4Q9P0V3 RPS26P15-201ENST00000488067 348 ntBASIC4.02□□□□□ -1.77
SH3BP4Q9P0V3 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.02□□□□□ -1.77
SH3BP4Q9P0V3 AC023141.12-201ENST00000512399 199 ntBASIC4.02□□□□□ -1.77
SH3BP4Q9P0V3 SNORA40.12-201ENST00000516329 111 ntBASIC4.02□□□□□ -1.77
SH3BP4Q9P0V3 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.02□□□□□ -1.77
SH3BP4Q9P0V3 IGKV2D-36-201ENST00000518643 226 ntBASIC4.02□□□□□ -1.77
SH3BP4Q9P0V3 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.02□□□□□ -1.77
SH3BP4Q9P0V3 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC4.02□□□□□ -1.77
SH3BP4Q9P0V3 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.02□□□□□ -1.77
SH3BP4Q9P0V3 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.02□□□□□ -1.77
SH3BP4Q9P0V3 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.02□□□□□ -1.77
SH3BP4Q9P0V3 AC055876.1-202ENST00000567053 138 ntBASIC4.02□□□□□ -1.77
SH3BP4Q9P0V3 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SH3BP4Q9P0V3 NRBF2P5-201ENST00000603087 788 ntBASIC4.02□□□□□ -1.77
SH3BP4Q9P0V3 BNIP3P10-201ENST00000605360 577 ntBASIC4.02□□□□□ -1.77
SH3BP4Q9P0V3 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.02□□□□□ -1.77
SH3BP4Q9P0V3 MIR7703-201ENST00000620784 77 ntBASIC4.02□□□□□ -1.77
SH3BP4Q9P0V3 MIR7702-201ENST00000621931 59 ntBASIC4.02□□□□□ -1.77
SH3BP4Q9P0V3 AC138649.5-201ENST00000637456 137 ntBASIC4.02□□□□□ -1.77
SH3BP4Q9P0V3 AC008013.2-202ENST00000637965 364 ntBASIC4.02□□□□□ -1.77
SH3BP4Q9P0V3 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
SH3BP4Q9P0V3 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
SH3BP4Q9P0V3 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.02□□□□□ -1.77
SH3BP4Q9P0V3 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.02□□□□□ -1.77
SH3BP4Q9P0V3 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
SH3BP4Q9P0V3 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
SH3BP4Q9P0V3 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.02□□□□□ -1.77
SH3BP4Q9P0V3 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SH3BP4Q9P0V3 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SH3BP4Q9P0V3 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
SH3BP4Q9P0V3 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.01□□□□□ -1.77
SH3BP4Q9P0V3 CKAP2P1-201ENST00000555477 2049 ntBASIC4.01□□□□□ -1.77
SH3BP4Q9P0V3 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SH3BP4Q9P0V3 XIAPP3-201ENST00000312918 795 ntBASIC4.01□□□□□ -1.77
SH3BP4Q9P0V3 Y_RNA.86-201ENST00000363020 111 ntBASIC4.01□□□□□ -1.77
SH3BP4Q9P0V3 RNY4P16-201ENST00000364768 94 ntBASIC4.01□□□□□ -1.77
SH3BP4Q9P0V3 RNU6-108P-201ENST00000365558 107 ntBASIC4.01□□□□□ -1.77
SH3BP4Q9P0V3 RNU6-398P-201ENST00000384143 109 ntBASIC4.01□□□□□ -1.77
SH3BP4Q9P0V3 RNU6-456P-201ENST00000384493 107 ntBASIC4.01□□□□□ -1.77
SH3BP4Q9P0V3 MT-TD-201ENST00000387419 68 ntBASIC4.01□□□□□ -1.77
SH3BP4Q9P0V3 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
SH3BP4Q9P0V3 RNA5SP36-201ENST00000410197 133 ntBASIC4.01□□□□□ -1.77
SH3BP4Q9P0V3 RNA5SP56-201ENST00000410277 118 ntBASIC4.01□□□□□ -1.77
SH3BP4Q9P0V3 OR9R1P-201ENST00000412200 877 ntBASIC4.01□□□□□ -1.77
SH3BP4Q9P0V3 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC4.01□□□□□ -1.77
SH3BP4Q9P0V3 AL807761.1-201ENST00000417622 171 ntBASIC4.01□□□□□ -1.77
SH3BP4Q9P0V3 SDCBPP3-201ENST00000419629 891 ntBASIC4.01□□□□□ -1.77
SH3BP4Q9P0V3 CYP4F29P-201ENST00000420685 446 ntBASIC4.01□□□□□ -1.77
SH3BP4Q9P0V3 AL391219.1-201ENST00000422570 483 ntBASIC4.01□□□□□ -1.77
SH3BP4Q9P0V3 AL157831.1-201ENST00000426134 473 ntBASIC4.01□□□□□ -1.77
SH3BP4Q9P0V3 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.01□□□□□ -1.77
SH3BP4Q9P0V3 AL356276.2-201ENST00000435919 558 ntBASIC4.01□□□□□ -1.77
SH3BP4Q9P0V3 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.01□□□□□ -1.77
SH3BP4Q9P0V3 SNRPGP6-201ENST00000451124 220 ntBASIC4.01□□□□□ -1.77
SH3BP4Q9P0V3 HMGB1P15-201ENST00000453854 435 ntBASIC4.01□□□□□ -1.77
SH3BP4Q9P0V3 AC104308.1-201ENST00000454621 333 ntBASIC4.01□□□□□ -1.77
SH3BP4Q9P0V3 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.01□□□□□ -1.77
SH3BP4Q9P0V3 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC4.01□□□□□ -1.77
SH3BP4Q9P0V3 snoU13.3-201ENST00000459441 104 ntBASIC4.01□□□□□ -1.77
SH3BP4Q9P0V3 RPS20P20-201ENST00000460498 340 ntBASIC4.01□□□□□ -1.77
SH3BP4Q9P0V3 MTCO2P29-201ENST00000465212 189 ntBASIC4.01□□□□□ -1.77
SH3BP4Q9P0V3 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.01□□□□□ -1.77
SH3BP4Q9P0V3 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
SH3BP4Q9P0V3 RN7SL810P-201ENST00000493031 276 ntBASIC4.01□□□□□ -1.77
SH3BP4Q9P0V3 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC4.01□□□□□ -1.77
SH3BP4Q9P0V3 NAF1-205ENST00000509434 385 ntTSL 3 BASIC4.01□□□□□ -1.77
SH3BP4Q9P0V3 RNA5SP73-201ENST00000516744 108 ntBASIC4.01□□□□□ -1.77
SH3BP4Q9P0V3 RNA5SP337-201ENST00000517007 109 ntBASIC4.01□□□□□ -1.77
SH3BP4Q9P0V3 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.01□□□□□ -1.77
SH3BP4Q9P0V3 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.01□□□□□ -1.77
SH3BP4Q9P0V3 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.01□□□□□ -1.77
SH3BP4Q9P0V3 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SH3BP4Q9P0V3 AC063950.1-201ENST00000552036 308 ntBASIC4.01□□□□□ -1.77
SH3BP4Q9P0V3 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.01□□□□□ -1.77
SH3BP4Q9P0V3 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC4.01□□□□□ -1.77
SH3BP4Q9P0V3 MIR3146-201ENST00000580367 79 ntBASIC4.01□□□□□ -1.77
SH3BP4Q9P0V3 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.01□□□□□ -1.77
SH3BP4Q9P0V3 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.01□□□□□ -1.77
SH3BP4Q9P0V3 AC005255.1-201ENST00000593748 216 ntBASIC4.01□□□□□ -1.77
SH3BP4Q9P0V3 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.01□□□□□ -1.77
SH3BP4Q9P0V3 AC009233.1-201ENST00000616477 371 ntBASIC4.01□□□□□ -1.77
SH3BP4Q9P0V3 MIR6730-201ENST00000622213 67 ntBASIC4.01□□□□□ -1.77
SH3BP4Q9P0V3 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
SH3BP4Q9P0V3 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
SH3BP4Q9P0V3 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
SH3BP4Q9P0V3 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.01□□□□□ -1.77
SH3BP4Q9P0V3 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4□□□□□ -1.77
SH3BP4Q9P0V3 ZNF962P-201ENST00000443465 3140 ntBASIC4□□□□□ -1.77
SH3BP4Q9P0V3 AL158163.1-201ENST00000603915 1649 ntBASIC4□□□□□ -1.77
SH3BP4Q9P0V3 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms