Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.37□□□□□ -1.71
MKS1Q9NXB0 AC090543.2-201ENST00000483963 348 ntBASIC4.37□□□□□ -1.71
MKS1Q9NXB0 AC004057.1-201ENST00000485827 348 ntBASIC4.37□□□□□ -1.71
MKS1Q9NXB0 AC139783.2-201ENST00000504847 1145 ntBASIC4.37□□□□□ -1.71
MKS1Q9NXB0 AC116353.2-201ENST00000505332 712 ntBASIC4.37□□□□□ -1.71
MKS1Q9NXB0 AC004062.1-201ENST00000509926 645 ntBASIC4.37□□□□□ -1.71
MKS1Q9NXB0 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.37□□□□□ -1.71
MKS1Q9NXB0 ERHP1-201ENST00000523006 310 ntBASIC4.37□□□□□ -1.71
MKS1Q9NXB0 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC4.37□□□□□ -1.71
MKS1Q9NXB0 AP001646.1-201ENST00000527936 915 ntBASIC4.37□□□□□ -1.71
MKS1Q9NXB0 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.37□□□□□ -1.71
MKS1Q9NXB0 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.37□□□□□ -1.71
MKS1Q9NXB0 AC006270.2-201ENST00000578523 652 ntBASIC4.37□□□□□ -1.71
MKS1Q9NXB0 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.37□□□□□ -1.71
MKS1Q9NXB0 MIR4644-201ENST00000579929 84 ntBASIC4.37□□□□□ -1.71
MKS1Q9NXB0 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.37□□□□□ -1.71
MKS1Q9NXB0 AL162413.1-201ENST00000603198 110 ntBASIC4.37□□□□□ -1.71
MKS1Q9NXB0 SDR42E1P1-201ENST00000611327 477 ntBASIC4.37□□□□□ -1.71
MKS1Q9NXB0 MIR4727-201ENST00000622232 55 ntBASIC4.37□□□□□ -1.71
MKS1Q9NXB0 AC138649.5-201ENST00000637456 137 ntBASIC4.37□□□□□ -1.71
MKS1Q9NXB0 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.37□□□□□ -1.71
MKS1Q9NXB0 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
MKS1Q9NXB0 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
MKS1Q9NXB0 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
MKS1Q9NXB0 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
MKS1Q9NXB0 GABPAP-201ENST00000419271 1356 ntBASIC4.37□□□□□ -1.71
MKS1Q9NXB0 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
MKS1Q9NXB0 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
MKS1Q9NXB0 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.37□□□□□ -1.71
MKS1Q9NXB0 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
MKS1Q9NXB0 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
MKS1Q9NXB0 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.36□□□□□ -1.71
MKS1Q9NXB0 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.36□□□□□ -1.71
MKS1Q9NXB0 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
MKS1Q9NXB0 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
MKS1Q9NXB0 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
MKS1Q9NXB0 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
MKS1Q9NXB0 RNA5SP388-201ENST00000362584 119 ntBASIC4.36□□□□□ -1.71
MKS1Q9NXB0 RNU6-534P-201ENST00000364877 106 ntBASIC4.36□□□□□ -1.71
MKS1Q9NXB0 RNU4-48P-201ENST00000365559 182 ntBASIC4.36□□□□□ -1.71
MKS1Q9NXB0 RNU6-641P-201ENST00000384006 107 ntBASIC4.36□□□□□ -1.71
MKS1Q9NXB0 MIR454-201ENST00000390180 115 ntBASIC4.36□□□□□ -1.71
MKS1Q9NXB0 RN7SKP213-201ENST00000410746 298 ntBASIC4.36□□□□□ -1.71
MKS1Q9NXB0 USP9YP6-201ENST00000413550 854 ntBASIC4.36□□□□□ -1.71
MKS1Q9NXB0 OR51A5P-201ENST00000415429 942 ntBASIC4.36□□□□□ -1.71
MKS1Q9NXB0 COX6B1P1-201ENST00000415962 213 ntBASIC4.36□□□□□ -1.71
MKS1Q9NXB0 RAC1P6-201ENST00000423911 575 ntBASIC4.36□□□□□ -1.71
MKS1Q9NXB0 AC017083.1-201ENST00000428093 483 ntBASIC4.36□□□□□ -1.71
MKS1Q9NXB0 AL627308.1-201ENST00000435693 821 ntBASIC4.36□□□□□ -1.71
MKS1Q9NXB0 MTND4P18-201ENST00000447010 465 ntBASIC4.36□□□□□ -1.71
MKS1Q9NXB0 AL451050.1-201ENST00000450126 415 ntBASIC4.36□□□□□ -1.71
MKS1Q9NXB0 ANP32BP2-201ENST00000454525 545 ntBASIC4.36□□□□□ -1.71
MKS1Q9NXB0 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.36□□□□□ -1.71
MKS1Q9NXB0 AL356010.1-201ENST00000456364 102 ntBASIC4.36□□□□□ -1.71
MKS1Q9NXB0 snoU13.4-201ENST00000458916 104 ntBASIC4.36□□□□□ -1.71
MKS1Q9NXB0 RN7SL585P-201ENST00000470538 280 ntBASIC4.36□□□□□ -1.71
MKS1Q9NXB0 AC008953.1-201ENST00000497334 318 ntBASIC4.36□□□□□ -1.71
MKS1Q9NXB0 AC116562.3-201ENST00000506136 177 ntBASIC4.36□□□□□ -1.71
MKS1Q9NXB0 PRDX4P1-201ENST00000507189 574 ntBASIC4.36□□□□□ -1.71
MKS1Q9NXB0 AC017037.1-201ENST00000508460 471 ntBASIC4.36□□□□□ -1.71
MKS1Q9NXB0 AC117522.1-201ENST00000509821 380 ntBASIC4.36□□□□□ -1.71
MKS1Q9NXB0 RNU6-390P-201ENST00000516259 103 ntBASIC4.36□□□□□ -1.71
MKS1Q9NXB0 SNORA40.12-201ENST00000516329 111 ntBASIC4.36□□□□□ -1.71
MKS1Q9NXB0 AC068587.5-201ENST00000528506 175 ntBASIC4.36□□□□□ -1.71
MKS1Q9NXB0 SNRPGP16-201ENST00000533275 226 ntBASIC4.36□□□□□ -1.71
MKS1Q9NXB0 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC4.36□□□□□ -1.71
MKS1Q9NXB0 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.36□□□□□ -1.71
MKS1Q9NXB0 EDDM3DP-201ENST00000554692 434 ntBASIC4.36□□□□□ -1.71
MKS1Q9NXB0 AC034105.3-201ENST00000565294 442 ntBASIC4.36□□□□□ -1.71
MKS1Q9NXB0 MTCO3P24-201ENST00000572729 782 ntBASIC4.36□□□□□ -1.71
MKS1Q9NXB0 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.36□□□□□ -1.71
MKS1Q9NXB0 AC007687.1-201ENST00000602704 304 ntBASIC4.36□□□□□ -1.71
MKS1Q9NXB0 AL670379.6-201ENST00000603753 252 ntBASIC4.36□□□□□ -1.71
MKS1Q9NXB0 AL670379.11-201ENST00000604059 253 ntBASIC4.36□□□□□ -1.71
MKS1Q9NXB0 AC008162.1-201ENST00000604718 254 ntBASIC4.36□□□□□ -1.71
MKS1Q9NXB0 AL670379.1-201ENST00000604752 252 ntBASIC4.36□□□□□ -1.71
MKS1Q9NXB0 AL670379.5-201ENST00000605253 252 ntBASIC4.36□□□□□ -1.71
MKS1Q9NXB0 AL670379.12-201ENST00000605291 253 ntBASIC4.36□□□□□ -1.71
MKS1Q9NXB0 AL670379.8-201ENST00000605353 252 ntBASIC4.36□□□□□ -1.71
MKS1Q9NXB0 AL670379.7-201ENST00000605823 252 ntBASIC4.36□□□□□ -1.71
MKS1Q9NXB0 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.36□□□□□ -1.71
MKS1Q9NXB0 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.36□□□□□ -1.71
MKS1Q9NXB0 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC4.36□□□□□ -1.71
MKS1Q9NXB0 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.36□□□□□ -1.71
MKS1Q9NXB0 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.36□□□□□ -1.71
MKS1Q9NXB0 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
MKS1Q9NXB0 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
MKS1Q9NXB0 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
MKS1Q9NXB0 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.35□□□□□ -1.71
MKS1Q9NXB0 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
MKS1Q9NXB0 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
MKS1Q9NXB0 RNA5SP507-201ENST00000363603 121 ntBASIC4.35□□□□□ -1.71
MKS1Q9NXB0 RNU6-188P-201ENST00000364207 107 ntBASIC4.35□□□□□ -1.71
MKS1Q9NXB0 Y_RNA.295-201ENST00000364918 102 ntBASIC4.35□□□□□ -1.71
MKS1Q9NXB0 SNORA36C-201ENST00000384289 132 ntBASIC4.35□□□□□ -1.71
MKS1Q9NXB0 MIR659-201ENST00000384963 97 ntBASIC4.35□□□□□ -1.71
MKS1Q9NXB0 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.35□□□□□ -1.71
MKS1Q9NXB0 RNU6-908P-201ENST00000410160 94 ntBASIC4.35□□□□□ -1.71
MKS1Q9NXB0 RPL23AP26-201ENST00000412728 464 ntBASIC4.35□□□□□ -1.71
MKS1Q9NXB0 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms