Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 AL391813.2-201ENST00000609113 322 ntBASIC3.58□□□□□ -1.84
SLC6A13Q9NSD5 AC090970.3-201ENST00000612566 866 ntBASIC3.58□□□□□ -1.84
SLC6A13Q9NSD5 AP001506.1-201ENST00000615444 211 ntBASIC3.58□□□□□ -1.84
SLC6A13Q9NSD5 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.58□□□□□ -1.84
SLC6A13Q9NSD5 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.58□□□□□ -1.84
SLC6A13Q9NSD5 AC092656.1-203ENST00000624134 423 ntBASIC3.58□□□□□ -1.84
SLC6A13Q9NSD5 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.58□□□□□ -1.84
SLC6A13Q9NSD5 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.58□□□□□ -1.84
SLC6A13Q9NSD5 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SLC6A13Q9NSD5 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
SLC6A13Q9NSD5 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SLC6A13Q9NSD5 AF127577.6-201ENST00000623352 2191 ntBASIC3.58□□□□□ -1.84
SLC6A13Q9NSD5 AL353746.1-201ENST00000566293 6881 ntBASIC3.58□□□□□ -1.84
SLC6A13Q9NSD5 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
SLC6A13Q9NSD5 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
SLC6A13Q9NSD5 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.57□□□□□ -1.84
SLC6A13Q9NSD5 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.57□□□□□ -1.84
SLC6A13Q9NSD5 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SLC6A13Q9NSD5 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
SLC6A13Q9NSD5 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SLC6A13Q9NSD5 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.57□□□□□ -1.84
SLC6A13Q9NSD5 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SLC6A13Q9NSD5 RNU6-76P-201ENST00000384060 104 ntBASIC3.57□□□□□ -1.84
SLC6A13Q9NSD5 RNU6-297P-201ENST00000384636 107 ntBASIC3.57□□□□□ -1.84
SLC6A13Q9NSD5 AL109755.1-201ENST00000401791 649 ntBASIC3.57□□□□□ -1.84
SLC6A13Q9NSD5 AL391417.1-201ENST00000404100 426 ntBASIC3.57□□□□□ -1.84
SLC6A13Q9NSD5 HSPE1P26-201ENST00000405341 275 ntBASIC3.57□□□□□ -1.84
SLC6A13Q9NSD5 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.57□□□□□ -1.84
SLC6A13Q9NSD5 RNU2-37P-201ENST00000410695 177 ntBASIC3.57□□□□□ -1.84
SLC6A13Q9NSD5 RNU6-248P-201ENST00000410720 107 ntBASIC3.57□□□□□ -1.84
SLC6A13Q9NSD5 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SLC6A13Q9NSD5 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SLC6A13Q9NSD5 TIMM9P1-201ENST00000436122 256 ntBASIC3.57□□□□□ -1.84
SLC6A13Q9NSD5 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
SLC6A13Q9NSD5 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.57□□□□□ -1.84
SLC6A13Q9NSD5 RPL21P89-201ENST00000444021 467 ntBASIC3.57□□□□□ -1.84
SLC6A13Q9NSD5 AL162389.1-201ENST00000449233 177 ntBASIC3.57□□□□□ -1.84
SLC6A13Q9NSD5 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.57□□□□□ -1.84
SLC6A13Q9NSD5 AC108059.3-201ENST00000456388 214 ntBASIC3.57□□□□□ -1.84
SLC6A13Q9NSD5 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.57□□□□□ -1.84
SLC6A13Q9NSD5 RNU7-170P-201ENST00000459303 61 ntBASIC3.57□□□□□ -1.84
SLC6A13Q9NSD5 RPL21P11-201ENST00000461458 483 ntBASIC3.57□□□□□ -1.84
SLC6A13Q9NSD5 AC078785.3-201ENST00000476607 425 ntBASIC3.57□□□□□ -1.84
SLC6A13Q9NSD5 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.57□□□□□ -1.84
SLC6A13Q9NSD5 AC108860.1-201ENST00000484521 383 ntBASIC3.57□□□□□ -1.84
SLC6A13Q9NSD5 AC020893.1-201ENST00000502452 580 ntBASIC3.57□□□□□ -1.84
SLC6A13Q9NSD5 MTCO3P7-201ENST00000510008 774 ntBASIC3.57□□□□□ -1.84
SLC6A13Q9NSD5 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.57□□□□□ -1.84
SLC6A13Q9NSD5 MTND3P5-201ENST00000512798 333 ntBASIC3.57□□□□□ -1.84
SLC6A13Q9NSD5 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
SLC6A13Q9NSD5 SNORA31.8-201ENST00000516327 108 ntBASIC3.57□□□□□ -1.84
SLC6A13Q9NSD5 RN7SKP209-201ENST00000516888 304 ntBASIC3.57□□□□□ -1.84
SLC6A13Q9NSD5 SCARNA14-201ENST00000516903 136 ntBASIC3.57□□□□□ -1.84
SLC6A13Q9NSD5 AC022695.1-201ENST00000522089 237 ntBASIC3.57□□□□□ -1.84
SLC6A13Q9NSD5 AC008489.1-201ENST00000524271 483 ntBASIC3.57□□□□□ -1.84
SLC6A13Q9NSD5 AC005832.2-201ENST00000538921 1430 ntBASIC3.57□□□□□ -1.84
SLC6A13Q9NSD5 MED28P6-201ENST00000558776 231 ntBASIC3.57□□□□□ -1.84
SLC6A13Q9NSD5 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.57□□□□□ -1.84
SLC6A13Q9NSD5 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.57□□□□□ -1.84
SLC6A13Q9NSD5 MIR3146-201ENST00000580367 79 ntBASIC3.57□□□□□ -1.84
SLC6A13Q9NSD5 AC040904.1-201ENST00000590850 223 ntBASIC3.57□□□□□ -1.84
SLC6A13Q9NSD5 CKS1BP3-201ENST00000600888 237 ntBASIC3.57□□□□□ -1.84
SLC6A13Q9NSD5 AC067959.1-201ENST00000604334 379 ntBASIC3.57□□□□□ -1.84
SLC6A13Q9NSD5 AL591034.3-201ENST00000605511 685 ntBASIC3.57□□□□□ -1.84
SLC6A13Q9NSD5 RNU4-89P-201ENST00000607443 133 ntBASIC3.57□□□□□ -1.84
SLC6A13Q9NSD5 AC004067.1-201ENST00000608733 700 ntBASIC3.57□□□□□ -1.84
SLC6A13Q9NSD5 AC024941.1-201ENST00000612250 334 ntBASIC3.57□□□□□ -1.84
SLC6A13Q9NSD5 ZYXP1-201ENST00000617638 118 ntBASIC3.57□□□□□ -1.84
SLC6A13Q9NSD5 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
SLC6A13Q9NSD5 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SLC6A13Q9NSD5 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SLC6A13Q9NSD5 AC092104.1-201ENST00000497346 1441 ntBASIC3.56□□□□□ -1.84
SLC6A13Q9NSD5 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SLC6A13Q9NSD5 GABPAP-201ENST00000419271 1356 ntBASIC3.56□□□□□ -1.84
SLC6A13Q9NSD5 RNU6-623P-201ENST00000363143 105 ntBASIC3.56□□□□□ -1.84
SLC6A13Q9NSD5 Y_RNA.194-201ENST00000363985 102 ntBASIC3.56□□□□□ -1.84
SLC6A13Q9NSD5 RNU6-283P-201ENST00000364788 107 ntBASIC3.56□□□□□ -1.84
SLC6A13Q9NSD5 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SLC6A13Q9NSD5 SNORA57.1-201ENST00000391227 145 ntBASIC3.56□□□□□ -1.84
SLC6A13Q9NSD5 RPS26P8-201ENST00000393490 348 ntBASIC3.56□□□□□ -1.84
SLC6A13Q9NSD5 AC007899.1-201ENST00000412776 775 ntBASIC3.56□□□□□ -1.84
SLC6A13Q9NSD5 CRYBB2P1-203ENST00000415709 538 ntBASIC3.56□□□□□ -1.84
SLC6A13Q9NSD5 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.56□□□□□ -1.84
SLC6A13Q9NSD5 AC002075.2-201ENST00000425207 252 ntBASIC3.56□□□□□ -1.84
SLC6A13Q9NSD5 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.56□□□□□ -1.84
SLC6A13Q9NSD5 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.56□□□□□ -1.84
SLC6A13Q9NSD5 RPL26P6-201ENST00000440913 438 ntBASIC3.56□□□□□ -1.84
SLC6A13Q9NSD5 AC114755.5-201ENST00000447760 831 ntBASIC3.56□□□□□ -1.84
SLC6A13Q9NSD5 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.56□□□□□ -1.84
SLC6A13Q9NSD5 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.56□□□□□ -1.84
SLC6A13Q9NSD5 AL136097.1-201ENST00000456945 913 ntBASIC3.56□□□□□ -1.84
SLC6A13Q9NSD5 RPL7P19-201ENST00000469948 618 ntBASIC3.56□□□□□ -1.84
SLC6A13Q9NSD5 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SLC6A13Q9NSD5 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.56□□□□□ -1.84
SLC6A13Q9NSD5 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.56□□□□□ -1.84
SLC6A13Q9NSD5 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.56□□□□□ -1.84
SLC6A13Q9NSD5 Y_RNA.672-201ENST00000516289 104 ntBASIC3.56□□□□□ -1.84
SLC6A13Q9NSD5 SNORA31.22-201ENST00000517204 135 ntBASIC3.56□□□□□ -1.84
SLC6A13Q9NSD5 MIR2116-201ENST00000517221 80 ntBASIC3.56□□□□□ -1.84
SLC6A13Q9NSD5 AC107934.1-201ENST00000522215 217 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms