Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 AF038458.1-201ENST00000588406 262 ntBASIC5.53□□□□□ -1.52
ZFYVE28Q9HCC9 AL670379.11-201ENST00000604059 253 ntBASIC5.53□□□□□ -1.52
ZFYVE28Q9HCC9 AL670379.10-201ENST00000604330 253 ntBASIC5.53□□□□□ -1.52
ZFYVE28Q9HCC9 AL670379.12-201ENST00000605291 253 ntBASIC5.53□□□□□ -1.52
ZFYVE28Q9HCC9 AL670379.9-201ENST00000605428 253 ntBASIC5.53□□□□□ -1.52
ZFYVE28Q9HCC9 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC5.53□□□□□ -1.52
ZFYVE28Q9HCC9 ZYXP1-201ENST00000617638 118 ntBASIC5.53□□□□□ -1.52
ZFYVE28Q9HCC9 RMST_9.1-201ENST00000619945 193 ntBASIC5.53□□□□□ -1.52
ZFYVE28Q9HCC9 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
ZFYVE28Q9HCC9 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.53□□□□□ -1.52
ZFYVE28Q9HCC9 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
ZFYVE28Q9HCC9 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
ZFYVE28Q9HCC9 RAD17P1-201ENST00000418130 2042 ntBASIC5.53□□□□□ -1.52
ZFYVE28Q9HCC9 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
ZFYVE28Q9HCC9 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
ZFYVE28Q9HCC9 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
ZFYVE28Q9HCC9 USP44-208ENST00000552440 1818 ntTSL 5 BASIC5.53□□□□□ -1.52
ZFYVE28Q9HCC9 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
ZFYVE28Q9HCC9 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
ZFYVE28Q9HCC9 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
ZFYVE28Q9HCC9 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
ZFYVE28Q9HCC9 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
ZFYVE28Q9HCC9 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
ZFYVE28Q9HCC9 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.52□□□□□ -1.53
ZFYVE28Q9HCC9 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
ZFYVE28Q9HCC9 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
ZFYVE28Q9HCC9 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
ZFYVE28Q9HCC9 Y_RNA.112-201ENST00000363250 102 ntBASIC5.52□□□□□ -1.53
ZFYVE28Q9HCC9 RN7SKP145-201ENST00000363291 303 ntBASIC5.52□□□□□ -1.53
ZFYVE28Q9HCC9 RNU6-1106P-201ENST00000390845 107 ntBASIC5.52□□□□□ -1.53
ZFYVE28Q9HCC9 VDAC1P9-201ENST00000412766 841 ntBASIC5.52□□□□□ -1.53
ZFYVE28Q9HCC9 AC079809.1-201ENST00000415468 276 ntBASIC5.52□□□□□ -1.53
ZFYVE28Q9HCC9 GNG5P5-201ENST00000420444 220 ntBASIC5.52□□□□□ -1.53
ZFYVE28Q9HCC9 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC5.52□□□□□ -1.53
ZFYVE28Q9HCC9 TXNP1-201ENST00000441872 371 ntBASIC5.52□□□□□ -1.53
ZFYVE28Q9HCC9 AL359073.1-201ENST00000448036 403 ntBASIC5.52□□□□□ -1.53
ZFYVE28Q9HCC9 AC090804.1-201ENST00000448870 490 ntBASIC5.52□□□□□ -1.53
ZFYVE28Q9HCC9 AC010655.1-201ENST00000449336 292 ntBASIC5.52□□□□□ -1.53
ZFYVE28Q9HCC9 AL591623.2-201ENST00000449978 222 ntBASIC5.52□□□□□ -1.53
ZFYVE28Q9HCC9 AL691482.1-201ENST00000453255 87 ntBASIC5.52□□□□□ -1.53
ZFYVE28Q9HCC9 RN7SL432P-201ENST00000484057 298 ntBASIC5.52□□□□□ -1.53
ZFYVE28Q9HCC9 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.52□□□□□ -1.53
ZFYVE28Q9HCC9 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC5.52□□□□□ -1.53
ZFYVE28Q9HCC9 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC5.52□□□□□ -1.53
ZFYVE28Q9HCC9 RN7SKP82-201ENST00000516786 223 ntBASIC5.52□□□□□ -1.53
ZFYVE28Q9HCC9 HMGB1P19-201ENST00000517578 577 ntBASIC5.52□□□□□ -1.53
ZFYVE28Q9HCC9 AC100870.1-201ENST00000522035 505 ntBASIC5.52□□□□□ -1.53
ZFYVE28Q9HCC9 AC135001.1-201ENST00000544546 283 ntBASIC5.52□□□□□ -1.53
ZFYVE28Q9HCC9 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.52□□□□□ -1.53
ZFYVE28Q9HCC9 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.52□□□□□ -1.53
ZFYVE28Q9HCC9 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC5.52□□□□□ -1.53
ZFYVE28Q9HCC9 AC023043.2-201ENST00000589678 1026 ntBASIC5.52□□□□□ -1.53
ZFYVE28Q9HCC9 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.52□□□□□ -1.53
ZFYVE28Q9HCC9 AC006006.1-201ENST00000603082 144 ntBASIC5.52□□□□□ -1.53
ZFYVE28Q9HCC9 AL031176.1-201ENST00000604554 466 ntBASIC5.52□□□□□ -1.53
ZFYVE28Q9HCC9 AP000654.2-201ENST00000605633 586 ntBASIC5.52□□□□□ -1.53
ZFYVE28Q9HCC9 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.52□□□□□ -1.53
ZFYVE28Q9HCC9 MIR6133-201ENST00000617057 108 ntBASIC5.52□□□□□ -1.53
ZFYVE28Q9HCC9 AC103705.1-201ENST00000619013 241 ntBASIC5.52□□□□□ -1.53
ZFYVE28Q9HCC9 AL022401.1-201ENST00000619498 108 ntBASIC5.52□□□□□ -1.53
ZFYVE28Q9HCC9 AC034229.5-201ENST00000624258 185 ntBASIC5.52□□□□□ -1.53
ZFYVE28Q9HCC9 AC008013.2-202ENST00000637965 364 ntBASIC5.52□□□□□ -1.53
ZFYVE28Q9HCC9 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC5.52□□□□□ -1.53
ZFYVE28Q9HCC9 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
ZFYVE28Q9HCC9 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
ZFYVE28Q9HCC9 MTND5P19-201ENST00000424872 1794 ntBASIC5.52□□□□□ -1.53
ZFYVE28Q9HCC9 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
ZFYVE28Q9HCC9 AC026523.2-201ENST00000625039 7739 ntBASIC5.51□□□□□ -1.53
ZFYVE28Q9HCC9 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.51□□□□□ -1.53
ZFYVE28Q9HCC9 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC5.51□□□□□ -1.53
ZFYVE28Q9HCC9 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
ZFYVE28Q9HCC9 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
ZFYVE28Q9HCC9 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
ZFYVE28Q9HCC9 AC011155.1-201ENST00000316512 456 ntBASIC5.51□□□□□ -1.53
ZFYVE28Q9HCC9 RNU6-1309P-201ENST00000363305 108 ntBASIC5.51□□□□□ -1.53
ZFYVE28Q9HCC9 AL359837.1-201ENST00000381357 287 ntBASIC5.51□□□□□ -1.53
ZFYVE28Q9HCC9 SNORD116-11-201ENST00000383882 92 ntBASIC5.51□□□□□ -1.53
ZFYVE28Q9HCC9 RNU6-146P-201ENST00000384602 108 ntBASIC5.51□□□□□ -1.53
ZFYVE28Q9HCC9 RPL21P24-201ENST00000413752 448 ntBASIC5.51□□□□□ -1.53
ZFYVE28Q9HCC9 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.51□□□□□ -1.53
ZFYVE28Q9HCC9 UBE2FP1-201ENST00000416536 447 ntBASIC5.51□□□□□ -1.53
ZFYVE28Q9HCC9 AC140479.3-201ENST00000418944 1126 ntBASIC5.51□□□□□ -1.53
ZFYVE28Q9HCC9 RPL31P12-201ENST00000422587 358 ntBASIC5.51□□□□□ -1.53
ZFYVE28Q9HCC9 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC5.51□□□□□ -1.53
ZFYVE28Q9HCC9 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
ZFYVE28Q9HCC9 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.51□□□□□ -1.53
ZFYVE28Q9HCC9 RPL7L1P1-201ENST00000448259 785 ntBASIC5.51□□□□□ -1.53
ZFYVE28Q9HCC9 MTND1P17-201ENST00000448961 204 ntBASIC5.51□□□□□ -1.53
ZFYVE28Q9HCC9 AC234775.1-201ENST00000454247 670 ntBASIC5.51□□□□□ -1.53
ZFYVE28Q9HCC9 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC5.51□□□□□ -1.53
ZFYVE28Q9HCC9 RN7SL303P-201ENST00000469773 251 ntBASIC5.51□□□□□ -1.53
ZFYVE28Q9HCC9 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC5.51□□□□□ -1.53
ZFYVE28Q9HCC9 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC5.51□□□□□ -1.53
ZFYVE28Q9HCC9 HIGD1AP13-201ENST00000509878 289 ntBASIC5.51□□□□□ -1.53
ZFYVE28Q9HCC9 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.51□□□□□ -1.53
ZFYVE28Q9HCC9 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC5.51□□□□□ -1.53
ZFYVE28Q9HCC9 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC5.51□□□□□ -1.53
ZFYVE28Q9HCC9 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.51□□□□□ -1.53
ZFYVE28Q9HCC9 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
ZFYVE28Q9HCC9 CR383656.7-201ENST00000548164 174 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms