Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
SALL3Q9BXA9 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.69
SALL3Q9BXA9 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.46□□□□□ -1.69
SALL3Q9BXA9 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SALL3Q9BXA9 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SALL3Q9BXA9 AC007529.1-201ENST00000418574 2178 ntBASIC4.46□□□□□ -1.7
SALL3Q9BXA9 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SALL3Q9BXA9 AC007656.2-201ENST00000624902 4547 ntBASIC4.46□□□□□ -1.7
SALL3Q9BXA9 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
SALL3Q9BXA9 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.46□□□□□ -1.7
SALL3Q9BXA9 ZNF680P1-201ENST00000436625 1469 ntBASIC4.46□□□□□ -1.7
SALL3Q9BXA9 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.46□□□□□ -1.7
SALL3Q9BXA9 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SALL3Q9BXA9 AL356274.2-201ENST00000624379 3752 ntBASIC4.46□□□□□ -1.7
SALL3Q9BXA9 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.46□□□□□ -1.7
SALL3Q9BXA9 HMGB1P17-201ENST00000403495 628 ntBASIC4.46□□□□□ -1.7
SALL3Q9BXA9 USP9YP27-201ENST00000418455 438 ntBASIC4.46□□□□□ -1.7
SALL3Q9BXA9 RPL30P3-201ENST00000424262 333 ntBASIC4.46□□□□□ -1.7
SALL3Q9BXA9 AL451074.3-201ENST00000437709 472 ntBASIC4.46□□□□□ -1.7
SALL3Q9BXA9 RPS29P31-201ENST00000446147 164 ntBASIC4.46□□□□□ -1.7
SALL3Q9BXA9 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC4.46□□□□□ -1.7
SALL3Q9BXA9 RPL37P3-201ENST00000456825 293 ntBASIC4.46□□□□□ -1.7
SALL3Q9BXA9 AC092757.1-201ENST00000467293 467 ntBASIC4.46□□□□□ -1.7
SALL3Q9BXA9 AC146944.2-203ENST00000502493 354 ntBASIC4.46□□□□□ -1.7
SALL3Q9BXA9 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.46□□□□□ -1.7
SALL3Q9BXA9 AC139495.1-202ENST00000513164 354 ntBASIC4.46□□□□□ -1.7
SALL3Q9BXA9 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC4.46□□□□□ -1.7
SALL3Q9BXA9 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SALL3Q9BXA9 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.46□□□□□ -1.7
SALL3Q9BXA9 AC025678.1-201ENST00000567861 338 ntBASIC4.46□□□□□ -1.7
SALL3Q9BXA9 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.46□□□□□ -1.7
SALL3Q9BXA9 AC053481.3-201ENST00000577881 843 ntBASIC4.46□□□□□ -1.7
SALL3Q9BXA9 AC064836.2-201ENST00000609491 462 ntBASIC4.46□□□□□ -1.7
SALL3Q9BXA9 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.46□□□□□ -1.7
SALL3Q9BXA9 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SALL3Q9BXA9 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SALL3Q9BXA9 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.45□□□□□ -1.7
SALL3Q9BXA9 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.45□□□□□ -1.7
SALL3Q9BXA9 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
SALL3Q9BXA9 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SALL3Q9BXA9 AC138915.3-201ENST00000562908 1389 ntBASIC4.45□□□□□ -1.7
SALL3Q9BXA9 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
SALL3Q9BXA9 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
SALL3Q9BXA9 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
SALL3Q9BXA9 USP8P1-201ENST00000494673 3183 ntBASIC4.45□□□□□ -1.7
SALL3Q9BXA9 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SALL3Q9BXA9 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
SALL3Q9BXA9 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SALL3Q9BXA9 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SALL3Q9BXA9 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SALL3Q9BXA9 SNORA70.4-201ENST00000365509 134 ntBASIC4.45□□□□□ -1.7
SALL3Q9BXA9 ATP5A1P2-201ENST00000412323 255 ntBASIC4.45□□□□□ -1.7
SALL3Q9BXA9 ZNF90P2-204ENST00000419323 1075 ntBASIC4.45□□□□□ -1.7
SALL3Q9BXA9 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.45□□□□□ -1.7
SALL3Q9BXA9 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.45□□□□□ -1.7
SALL3Q9BXA9 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.45□□□□□ -1.7
SALL3Q9BXA9 AL358232.1-201ENST00000448030 501 ntBASIC4.45□□□□□ -1.7
SALL3Q9BXA9 AL162388.1-201ENST00000450912 352 ntBASIC4.45□□□□□ -1.7
SALL3Q9BXA9 HMGN3P1-201ENST00000453847 193 ntBASIC4.45□□□□□ -1.7
SALL3Q9BXA9 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.45□□□□□ -1.7
SALL3Q9BXA9 HMGN1P12-201ENST00000499125 195 ntBASIC4.45□□□□□ -1.7
SALL3Q9BXA9 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.45□□□□□ -1.7
SALL3Q9BXA9 Y_RNA.693-201ENST00000516641 110 ntBASIC4.45□□□□□ -1.7
SALL3Q9BXA9 SCARNA13-201ENST00000516672 275 ntBASIC4.45□□□□□ -1.7
SALL3Q9BXA9 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.45□□□□□ -1.7
SALL3Q9BXA9 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.45□□□□□ -1.7
SALL3Q9BXA9 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC4.45□□□□□ -1.7
SALL3Q9BXA9 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SALL3Q9BXA9 OR5AL2P-201ENST00000532185 920 ntBASIC4.45□□□□□ -1.7
SALL3Q9BXA9 AC013828.2-201ENST00000532487 235 ntBASIC4.45□□□□□ -1.7
SALL3Q9BXA9 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.45□□□□□ -1.7
SALL3Q9BXA9 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.45□□□□□ -1.7
SALL3Q9BXA9 AC090502.2-201ENST00000549267 280 ntBASIC4.45□□□□□ -1.7
SALL3Q9BXA9 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
SALL3Q9BXA9 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.45□□□□□ -1.7
SALL3Q9BXA9 AC008739.3-201ENST00000603262 127 ntBASIC4.45□□□□□ -1.7
SALL3Q9BXA9 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.45□□□□□ -1.7
SALL3Q9BXA9 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.45□□□□□ -1.7
SALL3Q9BXA9 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SALL3Q9BXA9 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.44□□□□□ -1.7
SALL3Q9BXA9 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SALL3Q9BXA9 AC007823.1-201ENST00000569932 1566 ntBASIC4.44□□□□□ -1.7
SALL3Q9BXA9 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SALL3Q9BXA9 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
SALL3Q9BXA9 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
SALL3Q9BXA9 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SALL3Q9BXA9 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SALL3Q9BXA9 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SALL3Q9BXA9 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
SALL3Q9BXA9 U8.3-201ENST00000363321 132 ntBASIC4.44□□□□□ -1.7
SALL3Q9BXA9 RNU6-1085P-201ENST00000363576 107 ntBASIC4.44□□□□□ -1.7
SALL3Q9BXA9 RNU6-1090P-201ENST00000364065 94 ntBASIC4.44□□□□□ -1.7
SALL3Q9BXA9 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
SALL3Q9BXA9 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
SALL3Q9BXA9 RNU6-877P-201ENST00000383868 107 ntBASIC4.44□□□□□ -1.7
SALL3Q9BXA9 Y_RNA.481-201ENST00000384373 102 ntBASIC4.44□□□□□ -1.7
SALL3Q9BXA9 Y_RNA.535-201ENST00000384612 99 ntBASIC4.44□□□□□ -1.7
SALL3Q9BXA9 MIR320C1-201ENST00000408566 88 ntBASIC4.44□□□□□ -1.7
SALL3Q9BXA9 CYCSP19-201ENST00000411715 316 ntBASIC4.44□□□□□ -1.7
SALL3Q9BXA9 RPS3AP9-201ENST00000417027 792 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms