Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.57□□□□□ -1.84
RAD9AQ99638 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.57□□□□□ -1.84
RAD9AQ99638 MTCO2P32-201ENST00000514865 403 ntBASIC3.57□□□□□ -1.84
RAD9AQ99638 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.57□□□□□ -1.84
RAD9AQ99638 RNA5SP216-201ENST00000516111 123 ntBASIC3.57□□□□□ -1.84
RAD9AQ99638 RN7SKP83-201ENST00000516512 178 ntBASIC3.57□□□□□ -1.84
RAD9AQ99638 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RAD9AQ99638 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.57□□□□□ -1.84
RAD9AQ99638 AC007834.2-201ENST00000536310 343 ntBASIC3.57□□□□□ -1.84
RAD9AQ99638 AC026333.2-201ENST00000542164 106 ntBASIC3.57□□□□□ -1.84
RAD9AQ99638 AC116096.1-201ENST00000566804 2314 ntBASIC3.57□□□□□ -1.84
RAD9AQ99638 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.57□□□□□ -1.84
RAD9AQ99638 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RAD9AQ99638 RPL12P50-201ENST00000603116 116 ntBASIC3.57□□□□□ -1.84
RAD9AQ99638 AL590282.1-201ENST00000610379 1136 ntBASIC3.57□□□□□ -1.84
RAD9AQ99638 VIS1.1-201ENST00000610517 203 ntBASIC3.57□□□□□ -1.84
RAD9AQ99638 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.57□□□□□ -1.84
RAD9AQ99638 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.57□□□□□ -1.84
RAD9AQ99638 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.57□□□□□ -1.84
RAD9AQ99638 AC078883.4-201ENST00000623218 367 ntBASIC3.57□□□□□ -1.84
RAD9AQ99638 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
RAD9AQ99638 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.57□□□□□ -1.84
RAD9AQ99638 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.57□□□□□ -1.84
RAD9AQ99638 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
RAD9AQ99638 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RAD9AQ99638 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.56□□□□□ -1.84
RAD9AQ99638 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RAD9AQ99638 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.56□□□□□ -1.84
RAD9AQ99638 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RAD9AQ99638 CR383658.2-201ENST00000547576 1525 ntBASIC3.56□□□□□ -1.84
RAD9AQ99638 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RAD9AQ99638 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
RAD9AQ99638 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
RAD9AQ99638 RNA5SP258-201ENST00000362750 119 ntBASIC3.56□□□□□ -1.84
RAD9AQ99638 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RAD9AQ99638 SNORD51-201ENST00000384320 80 ntBASIC3.56□□□□□ -1.84
RAD9AQ99638 RNU5A-2P-201ENST00000384337 116 ntBASIC3.56□□□□□ -1.84
RAD9AQ99638 AL031679.1-201ENST00000400616 525 ntBASIC3.56□□□□□ -1.84
RAD9AQ99638 AL031121.1-201ENST00000406553 254 ntBASIC3.56□□□□□ -1.84
RAD9AQ99638 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.56□□□□□ -1.84
RAD9AQ99638 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.56□□□□□ -1.84
RAD9AQ99638 AC019178.2-201ENST00000423595 505 ntBASIC3.56□□□□□ -1.84
RAD9AQ99638 AL590233.1-201ENST00000430017 456 ntBASIC3.56□□□□□ -1.84
RAD9AQ99638 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.56□□□□□ -1.84
RAD9AQ99638 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.56□□□□□ -1.84
RAD9AQ99638 EEF1E1P1-201ENST00000446998 430 ntBASIC3.56□□□□□ -1.84
RAD9AQ99638 MEMO1P3-201ENST00000459811 302 ntBASIC3.56□□□□□ -1.84
RAD9AQ99638 RPL21P8-201ENST00000465083 535 ntBASIC3.56□□□□□ -1.84
RAD9AQ99638 HMGB1P25-201ENST00000468402 607 ntBASIC3.56□□□□□ -1.84
RAD9AQ99638 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.56□□□□□ -1.84
RAD9AQ99638 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.56□□□□□ -1.84
RAD9AQ99638 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.56□□□□□ -1.84
RAD9AQ99638 MTCYBP43-201ENST00000513621 740 ntBASIC3.56□□□□□ -1.84
RAD9AQ99638 AC118465.1-201ENST00000513820 1271 ntBASIC3.56□□□□□ -1.84
RAD9AQ99638 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.56□□□□□ -1.84
RAD9AQ99638 AC008489.1-201ENST00000524271 483 ntBASIC3.56□□□□□ -1.84
RAD9AQ99638 OR4P1P-201ENST00000530808 1136 ntBASIC3.56□□□□□ -1.84
RAD9AQ99638 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.56□□□□□ -1.84
RAD9AQ99638 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.56□□□□□ -1.84
RAD9AQ99638 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.56□□□□□ -1.84
RAD9AQ99638 AP000811.1-201ENST00000603803 651 ntBASIC3.56□□□□□ -1.84
RAD9AQ99638 AC018714.1-201ENST00000605028 208 ntBASIC3.56□□□□□ -1.84
RAD9AQ99638 AC055876.5-201ENST00000605667 259 ntBASIC3.56□□□□□ -1.84
RAD9AQ99638 AC116312.1-201ENST00000606841 314 ntBASIC3.56□□□□□ -1.84
RAD9AQ99638 OR2AS2P-201ENST00000606902 342 ntBASIC3.56□□□□□ -1.84
RAD9AQ99638 RNVU1-4-201ENST00000612985 164 ntBASIC3.56□□□□□ -1.84
RAD9AQ99638 AL357080.1-201ENST00000617394 239 ntBASIC3.56□□□□□ -1.84
RAD9AQ99638 AC007998.5-201ENST00000622938 237 ntBASIC3.56□□□□□ -1.84
RAD9AQ99638 AC018692.3-201ENST00000623929 123 ntBASIC3.56□□□□□ -1.84
RAD9AQ99638 AC007671.2-201ENST00000637344 619 ntBASIC3.56□□□□□ -1.84
RAD9AQ99638 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.56□□□□□ -1.84
RAD9AQ99638 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RAD9AQ99638 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.56□□□□□ -1.84
RAD9AQ99638 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RAD9AQ99638 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.55□□□□□ -1.84
RAD9AQ99638 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RAD9AQ99638 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RAD9AQ99638 AC244517.1-201ENST00000606030 2086 ntBASIC3.55□□□□□ -1.84
RAD9AQ99638 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.55□□□□□ -1.84
RAD9AQ99638 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
RAD9AQ99638 RNU6-1249P-201ENST00000363237 111 ntBASIC3.55□□□□□ -1.84
RAD9AQ99638 RNU6-301P-201ENST00000384277 107 ntBASIC3.55□□□□□ -1.84
RAD9AQ99638 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.55□□□□□ -1.84
RAD9AQ99638 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RAD9AQ99638 RNA5SP129-201ENST00000410276 118 ntBASIC3.55□□□□□ -1.84
RAD9AQ99638 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RAD9AQ99638 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.55□□□□□ -1.84
RAD9AQ99638 USP9YP26-201ENST00000421008 661 ntBASIC3.55□□□□□ -1.84
RAD9AQ99638 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC3.55□□□□□ -1.84
RAD9AQ99638 AL365203.2-201ENST00000423444 196 ntBASIC3.55□□□□□ -1.84
RAD9AQ99638 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.55□□□□□ -1.84
RAD9AQ99638 AL353705.1-201ENST00000433468 480 ntBASIC3.55□□□□□ -1.84
RAD9AQ99638 MUPP-201ENST00000438111 566 ntBASIC3.55□□□□□ -1.84
RAD9AQ99638 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.55□□□□□ -1.84
RAD9AQ99638 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.55□□□□□ -1.84
RAD9AQ99638 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.55□□□□□ -1.84
RAD9AQ99638 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC3.55□□□□□ -1.84
RAD9AQ99638 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.55□□□□□ -1.84
RAD9AQ99638 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.55□□□□□ -1.84
RAD9AQ99638 RPL12P22-201ENST00000519073 490 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 141 ms