Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AC112498.1-201ENST00000444401 332 ntBASIC4.67□□□□□ -1.66
PTCHD1Q96NR3 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.67□□□□□ -1.66
PTCHD1Q96NR3 CYCSP24-201ENST00000445119 316 ntBASIC4.67□□□□□ -1.66
PTCHD1Q96NR3 AL162389.1-201ENST00000449233 177 ntBASIC4.67□□□□□ -1.66
PTCHD1Q96NR3 IFNWP4-201ENST00000453148 294 ntBASIC4.67□□□□□ -1.66
PTCHD1Q96NR3 MTCO3P10-201ENST00000455912 772 ntBASIC4.67□□□□□ -1.66
PTCHD1Q96NR3 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC4.67□□□□□ -1.66
PTCHD1Q96NR3 RN7SL346P-201ENST00000491561 294 ntBASIC4.67□□□□□ -1.66
PTCHD1Q96NR3 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.67□□□□□ -1.66
PTCHD1Q96NR3 ENPP7P11-201ENST00000505915 627 ntBASIC4.67□□□□□ -1.66
PTCHD1Q96NR3 Y_RNA.720-201ENST00000517166 92 ntBASIC4.67□□□□□ -1.66
PTCHD1Q96NR3 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC4.67□□□□□ -1.66
PTCHD1Q96NR3 PTP4A1P6-201ENST00000531034 478 ntBASIC4.67□□□□□ -1.66
PTCHD1Q96NR3 AP003385.6-201ENST00000531603 374 ntBASIC4.67□□□□□ -1.66
PTCHD1Q96NR3 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.67□□□□□ -1.66
PTCHD1Q96NR3 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.67□□□□□ -1.66
PTCHD1Q96NR3 AC008033.2-201ENST00000542626 177 ntBASIC4.67□□□□□ -1.66
PTCHD1Q96NR3 EDDM3DP-201ENST00000554692 434 ntBASIC4.67□□□□□ -1.66
PTCHD1Q96NR3 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.67□□□□□ -1.66
PTCHD1Q96NR3 MIR4436B2-201ENST00000581415 91 ntBASIC4.67□□□□□ -1.66
PTCHD1Q96NR3 MIR4436B1-201ENST00000583272 91 ntBASIC4.67□□□□□ -1.66
PTCHD1Q96NR3 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.67□□□□□ -1.66
PTCHD1Q96NR3 AL670379.4-201ENST00000605279 254 ntBASIC4.67□□□□□ -1.66
PTCHD1Q96NR3 AP000654.2-201ENST00000605633 586 ntBASIC4.67□□□□□ -1.66
PTCHD1Q96NR3 AL157817.1-201ENST00000614264 790 ntBASIC4.67□□□□□ -1.66
PTCHD1Q96NR3 AC133104.2-201ENST00000615272 193 ntBASIC4.67□□□□□ -1.66
PTCHD1Q96NR3 AL158196.1-201ENST00000616786 434 ntBASIC4.67□□□□□ -1.66
PTCHD1Q96NR3 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
PTCHD1Q96NR3 AL445363.3-201ENST00000623080 671 ntBASIC4.67□□□□□ -1.66
PTCHD1Q96NR3 AC110801.1-201ENST00000623590 212 ntBASIC4.67□□□□□ -1.66
PTCHD1Q96NR3 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.67□□□□□ -1.66
PTCHD1Q96NR3 DDX10P1-201ENST00000448545 1933 ntBASIC4.67□□□□□ -1.66
PTCHD1Q96NR3 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.67□□□□□ -1.66
PTCHD1Q96NR3 AL592437.2-201ENST00000421655 2434 ntBASIC4.67□□□□□ -1.66
PTCHD1Q96NR3 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
PTCHD1Q96NR3 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.67□□□□□ -1.66
PTCHD1Q96NR3 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.67□□□□□ -1.66
PTCHD1Q96NR3 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PTCHD1Q96NR3 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PTCHD1Q96NR3 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.67□□□□□ -1.66
PTCHD1Q96NR3 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.67□□□□□ -1.66
PTCHD1Q96NR3 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PTCHD1Q96NR3 MTND5P1-201ENST00000445440 1375 ntBASIC4.66□□□□□ -1.66
PTCHD1Q96NR3 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.66□□□□□ -1.66
PTCHD1Q96NR3 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PTCHD1Q96NR3 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.66□□□□□ -1.66
PTCHD1Q96NR3 MTCO1P24-201ENST00000515438 1558 ntBASIC4.66□□□□□ -1.66
PTCHD1Q96NR3 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
PTCHD1Q96NR3 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PTCHD1Q96NR3 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PTCHD1Q96NR3 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.66□□□□□ -1.66
PTCHD1Q96NR3 AC099654.2-201ENST00000433031 1980 ntBASIC4.66□□□□□ -1.66
PTCHD1Q96NR3 IRF5P1-201ENST00000504852 2164 ntBASIC4.66□□□□□ -1.66
PTCHD1Q96NR3 RNU6-601P-201ENST00000384540 107 ntBASIC4.66□□□□□ -1.66
PTCHD1Q96NR3 AL360182.1-201ENST00000397433 468 ntBASIC4.66□□□□□ -1.66
PTCHD1Q96NR3 MIR450B-201ENST00000401182 78 ntBASIC4.66□□□□□ -1.66
PTCHD1Q96NR3 MIR1250-201ENST00000408098 113 ntBASIC4.66□□□□□ -1.66
PTCHD1Q96NR3 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PTCHD1Q96NR3 BX682237.1-201ENST00000415016 335 ntBASIC4.66□□□□□ -1.66
PTCHD1Q96NR3 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.66□□□□□ -1.66
PTCHD1Q96NR3 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.66□□□□□ -1.66
PTCHD1Q96NR3 AL358176.2-201ENST00000425769 204 ntBASIC4.66□□□□□ -1.66
PTCHD1Q96NR3 ELOCP18-201ENST00000434209 337 ntBASIC4.66□□□□□ -1.66
PTCHD1Q96NR3 GAPDHP27-201ENST00000447427 1020 ntBASIC4.66□□□□□ -1.66
PTCHD1Q96NR3 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC4.66□□□□□ -1.66
PTCHD1Q96NR3 AL691482.1-201ENST00000453255 87 ntBASIC4.66□□□□□ -1.66
PTCHD1Q96NR3 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.66□□□□□ -1.66
PTCHD1Q96NR3 RPL7P23-201ENST00000493874 747 ntBASIC4.66□□□□□ -1.66
PTCHD1Q96NR3 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
PTCHD1Q96NR3 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PTCHD1Q96NR3 MRPS33P2-201ENST00000507850 322 ntBASIC4.66□□□□□ -1.66
PTCHD1Q96NR3 PTP4A1P4-201ENST00000512479 322 ntBASIC4.66□□□□□ -1.66
PTCHD1Q96NR3 OR5D15P-201ENST00000531671 942 ntBASIC4.66□□□□□ -1.66
PTCHD1Q96NR3 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC4.66□□□□□ -1.66
PTCHD1Q96NR3 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.66□□□□□ -1.66
PTCHD1Q96NR3 MIR3934-201ENST00000579806 107 ntBASIC4.66□□□□□ -1.66
PTCHD1Q96NR3 AC069061.3-201ENST00000582254 823 ntBASIC4.66□□□□□ -1.66
PTCHD1Q96NR3 AL669831.4-202ENST00000590817 238 ntBASIC4.66□□□□□ -1.66
PTCHD1Q96NR3 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC4.66□□□□□ -1.66
PTCHD1Q96NR3 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.66□□□□□ -1.66
PTCHD1Q96NR3 AC012409.4-201ENST00000612923 249 ntBASIC4.66□□□□□ -1.66
PTCHD1Q96NR3 AL132822.1-201ENST00000617063 513 ntBASIC4.66□□□□□ -1.66
PTCHD1Q96NR3 AC138305.3-201ENST00000624988 240 ntBASIC4.66□□□□□ -1.66
PTCHD1Q96NR3 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.66□□□□□ -1.66
PTCHD1Q96NR3 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.66□□□□□ -1.66
PTCHD1Q96NR3 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
PTCHD1Q96NR3 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
PTCHD1Q96NR3 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
PTCHD1Q96NR3 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.66□□□□□ -1.66
PTCHD1Q96NR3 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.66□□□□□ -1.66
PTCHD1Q96NR3 MAPK10-263ENST00000641052 4307 ntBASIC4.65□□□□□ -1.66
PTCHD1Q96NR3 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.66
PTCHD1Q96NR3 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.65□□□□□ -1.66
PTCHD1Q96NR3 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.65□□□□□ -1.66
PTCHD1Q96NR3 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.65□□□□□ -1.66
PTCHD1Q96NR3 ZNF519P1-201ENST00000449011 1626 ntBASIC4.65□□□□□ -1.66
PTCHD1Q96NR3 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.65□□□□□ -1.66
PTCHD1Q96NR3 AC022893.2-201ENST00000564832 3296 ntBASIC4.65□□□□□ -1.66
PTCHD1Q96NR3 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.66
PTCHD1Q96NR3 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms