Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.45□□□□□ -1.86
CMTM3Q96MX0 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.45□□□□□ -1.86
CMTM3Q96MX0 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.45□□□□□ -1.86
CMTM3Q96MX0 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
CMTM3Q96MX0 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CMTM3Q96MX0 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CMTM3Q96MX0 AC007496.3-201ENST00000624987 3443 ntBASIC3.44□□□□□ -1.86
CMTM3Q96MX0 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.44□□□□□ -1.86
CMTM3Q96MX0 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CMTM3Q96MX0 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CMTM3Q96MX0 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
CMTM3Q96MX0 OR4K15-201ENST00000305051 1216 ntBASIC3.44□□□□□ -1.86
CMTM3Q96MX0 Y_RNA.77-201ENST00000362962 107 ntBASIC3.44□□□□□ -1.86
CMTM3Q96MX0 RNU6-1284P-201ENST00000363701 100 ntBASIC3.44□□□□□ -1.86
CMTM3Q96MX0 RNY4P16-201ENST00000364768 94 ntBASIC3.44□□□□□ -1.86
CMTM3Q96MX0 SNORA1.3-201ENST00000384676 136 ntBASIC3.44□□□□□ -1.86
CMTM3Q96MX0 RPS4XP9-201ENST00000405151 780 ntBASIC3.44□□□□□ -1.86
CMTM3Q96MX0 AC006366.1-201ENST00000422002 759 ntBASIC3.44□□□□□ -1.86
CMTM3Q96MX0 TRIAP1P1-201ENST00000427062 225 ntBASIC3.44□□□□□ -1.86
CMTM3Q96MX0 RPL23AP1-201ENST00000428990 471 ntBASIC3.44□□□□□ -1.86
CMTM3Q96MX0 PGBD4P3-201ENST00000440731 581 ntBASIC3.44□□□□□ -1.86
CMTM3Q96MX0 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC3.44□□□□□ -1.86
CMTM3Q96MX0 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.44□□□□□ -1.86
CMTM3Q96MX0 AC016696.1-201ENST00000446949 318 ntBASIC3.44□□□□□ -1.86
CMTM3Q96MX0 PDSS1P2-201ENST00000449397 678 ntBASIC3.44□□□□□ -1.86
CMTM3Q96MX0 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.44□□□□□ -1.86
CMTM3Q96MX0 RPL21P126-201ENST00000470049 478 ntBASIC3.44□□□□□ -1.86
CMTM3Q96MX0 ACTR3P3-201ENST00000480448 893 ntBASIC3.44□□□□□ -1.86
CMTM3Q96MX0 AC006483.1-201ENST00000487308 313 ntBASIC3.44□□□□□ -1.86
CMTM3Q96MX0 RN7SL691P-201ENST00000494487 301 ntBASIC3.44□□□□□ -1.86
CMTM3Q96MX0 RPL30P5-201ENST00000494923 336 ntBASIC3.44□□□□□ -1.86
CMTM3Q96MX0 AC231760.1-201ENST00000498002 260 ntBASIC3.44□□□□□ -1.86
CMTM3Q96MX0 RPS27AP13-201ENST00000498403 237 ntBASIC3.44□□□□□ -1.86
CMTM3Q96MX0 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.44□□□□□ -1.86
CMTM3Q96MX0 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.44□□□□□ -1.86
CMTM3Q96MX0 AC026784.1-201ENST00000507986 352 ntBASIC3.44□□□□□ -1.86
CMTM3Q96MX0 OR7H2P-201ENST00000513483 306 ntBASIC3.44□□□□□ -1.86
CMTM3Q96MX0 AC114797.1-201ENST00000514003 728 ntBASIC3.44□□□□□ -1.86
CMTM3Q96MX0 AC117532.1-201ENST00000514638 323 ntBASIC3.44□□□□□ -1.86
CMTM3Q96MX0 RNU6-1256P-201ENST00000516539 103 ntBASIC3.44□□□□□ -1.86
CMTM3Q96MX0 AP003181.2-201ENST00000528941 181 ntBASIC3.44□□□□□ -1.86
CMTM3Q96MX0 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC3.44□□□□□ -1.86
CMTM3Q96MX0 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.44□□□□□ -1.86
CMTM3Q96MX0 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.44□□□□□ -1.86
CMTM3Q96MX0 AL121576.1-201ENST00000556055 276 ntBASIC3.44□□□□□ -1.86
CMTM3Q96MX0 AC090877.1-201ENST00000561418 344 ntBASIC3.44□□□□□ -1.86
CMTM3Q96MX0 AC025627.2-201ENST00000576220 160 ntBASIC3.44□□□□□ -1.86
CMTM3Q96MX0 AC022655.2-201ENST00000577280 318 ntBASIC3.44□□□□□ -1.86
CMTM3Q96MX0 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.44□□□□□ -1.86
CMTM3Q96MX0 HMGN1P30-201ENST00000589286 268 ntBASIC3.44□□□□□ -1.86
CMTM3Q96MX0 CKS1BP3-201ENST00000600888 237 ntBASIC3.44□□□□□ -1.86
CMTM3Q96MX0 BRDTP1-201ENST00000605735 677 ntBASIC3.44□□□□□ -1.86
CMTM3Q96MX0 RNVU1-4-201ENST00000612985 164 ntBASIC3.44□□□□□ -1.86
CMTM3Q96MX0 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.44□□□□□ -1.86
CMTM3Q96MX0 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
CMTM3Q96MX0 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CMTM3Q96MX0 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CMTM3Q96MX0 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CMTM3Q96MX0 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CMTM3Q96MX0 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CMTM3Q96MX0 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CMTM3Q96MX0 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CMTM3Q96MX0 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CMTM3Q96MX0 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CMTM3Q96MX0 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.43□□□□□ -1.86
CMTM3Q96MX0 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
CMTM3Q96MX0 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CMTM3Q96MX0 LARP1BP1-201ENST00000506036 1359 ntBASIC3.43□□□□□ -1.86
CMTM3Q96MX0 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
CMTM3Q96MX0 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CMTM3Q96MX0 SNORA58B-201ENST00000364259 136 ntBASIC3.43□□□□□ -1.86
CMTM3Q96MX0 RNU1-132P-201ENST00000364300 164 ntBASIC3.43□□□□□ -1.86
CMTM3Q96MX0 RPS4XP3-201ENST00000398541 413 ntBASIC3.43□□□□□ -1.86
CMTM3Q96MX0 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CMTM3Q96MX0 MRPL42P2-201ENST00000403169 426 ntBASIC3.43□□□□□ -1.86
CMTM3Q96MX0 AL391417.1-201ENST00000404100 426 ntBASIC3.43□□□□□ -1.86
CMTM3Q96MX0 AL359634.1-202ENST00000404721 284 ntBASIC3.43□□□□□ -1.86
CMTM3Q96MX0 RN7SKP182-201ENST00000410772 298 ntBASIC3.43□□□□□ -1.86
CMTM3Q96MX0 AL513331.1-201ENST00000411908 397 ntBASIC3.43□□□□□ -1.86
CMTM3Q96MX0 HMGN1P14-201ENST00000412459 517 ntBASIC3.43□□□□□ -1.86
CMTM3Q96MX0 AL451054.2-201ENST00000420896 202 ntBASIC3.43□□□□□ -1.86
CMTM3Q96MX0 AC019097.1-201ENST00000424783 735 ntBASIC3.43□□□□□ -1.86
CMTM3Q96MX0 AC002075.2-201ENST00000425207 252 ntBASIC3.43□□□□□ -1.86
CMTM3Q96MX0 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.43□□□□□ -1.86
CMTM3Q96MX0 HIGD1AP11-201ENST00000438361 280 ntBASIC3.43□□□□□ -1.86
CMTM3Q96MX0 AC093156.1-201ENST00000440382 670 ntBASIC3.43□□□□□ -1.86
CMTM3Q96MX0 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.43□□□□□ -1.86
CMTM3Q96MX0 PHBP16-201ENST00000446318 950 ntBASIC3.43□□□□□ -1.86
CMTM3Q96MX0 ST13P20-201ENST00000447996 1065 ntBASIC3.43□□□□□ -1.86
CMTM3Q96MX0 SSXP1-201ENST00000453640 473 ntBASIC3.43□□□□□ -1.86
CMTM3Q96MX0 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.43□□□□□ -1.86
CMTM3Q96MX0 RPL35AP28-201ENST00000459730 331 ntBASIC3.43□□□□□ -1.86
CMTM3Q96MX0 RPL23AP14-201ENST00000468281 468 ntBASIC3.43□□□□□ -1.86
CMTM3Q96MX0 AC068724.1-201ENST00000487100 792 ntBASIC3.43□□□□□ -1.86
CMTM3Q96MX0 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.43□□□□□ -1.86
CMTM3Q96MX0 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.43□□□□□ -1.86
CMTM3Q96MX0 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.43□□□□□ -1.86
CMTM3Q96MX0 RNA5SP519-201ENST00000516480 119 ntBASIC3.43□□□□□ -1.86
CMTM3Q96MX0 Y_RNA.695-201ENST00000516715 107 ntBASIC3.43□□□□□ -1.86
CMTM3Q96MX0 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms