Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AC012669.1-201ENST00000603209 283 ntBASIC4.44□□□□□ -1.7
CDK5RAP3Q96JB5 AC245014.2-201ENST00000603689 287 ntBASIC4.44□□□□□ -1.7
CDK5RAP3Q96JB5 AC091167.4-201ENST00000605079 184 ntBASIC4.44□□□□□ -1.7
CDK5RAP3Q96JB5 AC246785.4-201ENST00000605374 287 ntBASIC4.44□□□□□ -1.7
CDK5RAP3Q96JB5 AC126118.1-201ENST00000607744 628 ntBASIC4.44□□□□□ -1.7
CDK5RAP3Q96JB5 U6atac.1-201ENST00000616025 117 ntBASIC4.44□□□□□ -1.7
CDK5RAP3Q96JB5 AL158209.2-201ENST00000619266 216 ntBASIC4.44□□□□□ -1.7
CDK5RAP3Q96JB5 AC136475.10-201ENST00000620253 385 ntBASIC4.44□□□□□ -1.7
CDK5RAP3Q96JB5 AL160394.1-201ENST00000624765 724 ntBASIC4.44□□□□□ -1.7
CDK5RAP3Q96JB5 AP001350.1-201ENST00000601906 1524 ntBASIC4.44□□□□□ -1.7
CDK5RAP3Q96JB5 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
CDK5RAP3Q96JB5 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CDK5RAP3Q96JB5 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CDK5RAP3Q96JB5 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
CDK5RAP3Q96JB5 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.43□□□□□ -1.7
CDK5RAP3Q96JB5 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CDK5RAP3Q96JB5 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.43□□□□□ -1.7
CDK5RAP3Q96JB5 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
CDK5RAP3Q96JB5 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CDK5RAP3Q96JB5 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.43□□□□□ -1.7
CDK5RAP3Q96JB5 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CDK5RAP3Q96JB5 IPO8P1-201ENST00000455509 3109 ntBASIC4.43□□□□□ -1.7
CDK5RAP3Q96JB5 AC244517.1-201ENST00000606030 2086 ntBASIC4.43□□□□□ -1.7
CDK5RAP3Q96JB5 RNU5E-1-201ENST00000362477 120 ntBASIC4.43□□□□□ -1.7
CDK5RAP3Q96JB5 RNU6-1078P-201ENST00000364522 103 ntBASIC4.43□□□□□ -1.7
CDK5RAP3Q96JB5 RNY4P16-201ENST00000364768 94 ntBASIC4.43□□□□□ -1.7
CDK5RAP3Q96JB5 RPL23AP32-201ENST00000395315 459 ntBASIC4.43□□□□□ -1.7
CDK5RAP3Q96JB5 GSTA9P-201ENST00000406231 611 ntBASIC4.43□□□□□ -1.7
CDK5RAP3Q96JB5 RNU6-712P-201ENST00000410558 100 ntBASIC4.43□□□□□ -1.7
CDK5RAP3Q96JB5 PIGFP2-201ENST00000421400 651 ntBASIC4.43□□□□□ -1.7
CDK5RAP3Q96JB5 RSL24D1P6-201ENST00000426934 401 ntBASIC4.43□□□□□ -1.7
CDK5RAP3Q96JB5 AC119618.1-201ENST00000434191 222 ntBASIC4.43□□□□□ -1.7
CDK5RAP3Q96JB5 KCTD9P3-201ENST00000434597 1169 ntBASIC4.43□□□□□ -1.7
CDK5RAP3Q96JB5 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.43□□□□□ -1.7
CDK5RAP3Q96JB5 TBCAP1-201ENST00000436520 327 ntBASIC4.43□□□□□ -1.7
CDK5RAP3Q96JB5 USP9YP15-201ENST00000442391 422 ntBASIC4.43□□□□□ -1.7
CDK5RAP3Q96JB5 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC4.43□□□□□ -1.7
CDK5RAP3Q96JB5 AL451050.1-201ENST00000450126 415 ntBASIC4.43□□□□□ -1.7
CDK5RAP3Q96JB5 AC093392.2-201ENST00000450682 337 ntBASIC4.43□□□□□ -1.7
CDK5RAP3Q96JB5 RPL21P11-201ENST00000461458 483 ntBASIC4.43□□□□□ -1.7
CDK5RAP3Q96JB5 PPIAP15-201ENST00000479662 484 ntBASIC4.43□□□□□ -1.7
CDK5RAP3Q96JB5 AP001086.1-201ENST00000494882 321 ntBASIC4.43□□□□□ -1.7
CDK5RAP3Q96JB5 KCTD9P5-201ENST00000504141 1170 ntBASIC4.43□□□□□ -1.7
CDK5RAP3Q96JB5 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.43□□□□□ -1.7
CDK5RAP3Q96JB5 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.43□□□□□ -1.7
CDK5RAP3Q96JB5 RN7SKP244-201ENST00000516513 307 ntBASIC4.43□□□□□ -1.7
CDK5RAP3Q96JB5 RNU6-314P-201ENST00000516574 104 ntBASIC4.43□□□□□ -1.7
CDK5RAP3Q96JB5 RNU6-798P-201ENST00000516912 103 ntBASIC4.43□□□□□ -1.7
CDK5RAP3Q96JB5 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.43□□□□□ -1.7
CDK5RAP3Q96JB5 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.43□□□□□ -1.7
CDK5RAP3Q96JB5 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.43□□□□□ -1.7
CDK5RAP3Q96JB5 AC109635.4-202ENST00000531666 412 ntBASIC4.43□□□□□ -1.7
CDK5RAP3Q96JB5 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.43□□□□□ -1.7
CDK5RAP3Q96JB5 AC126177.3-201ENST00000551839 688 ntBASIC4.43□□□□□ -1.7
CDK5RAP3Q96JB5 AL121603.1-201ENST00000553815 142 ntBASIC4.43□□□□□ -1.7
CDK5RAP3Q96JB5 MIR3146-201ENST00000580367 79 ntBASIC4.43□□□□□ -1.7
CDK5RAP3Q96JB5 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.43□□□□□ -1.7
CDK5RAP3Q96JB5 XIAPP1-201ENST00000603162 600 ntBASIC4.43□□□□□ -1.7
CDK5RAP3Q96JB5 AC103710.3-201ENST00000608157 948 ntBASIC4.43□□□□□ -1.7
CDK5RAP3Q96JB5 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.43□□□□□ -1.7
CDK5RAP3Q96JB5 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CDK5RAP3Q96JB5 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CDK5RAP3Q96JB5 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.43□□□□□ -1.7
CDK5RAP3Q96JB5 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
CDK5RAP3Q96JB5 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CDK5RAP3Q96JB5 MAPK10-372ENST00000641954 3413 ntBASIC4.43□□□□□ -1.7
CDK5RAP3Q96JB5 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CDK5RAP3Q96JB5 GABPAP-201ENST00000419271 1356 ntBASIC4.42□□□□□ -1.7
CDK5RAP3Q96JB5 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
CDK5RAP3Q96JB5 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CDK5RAP3Q96JB5 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
CDK5RAP3Q96JB5 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.42□□□□□ -1.7
CDK5RAP3Q96JB5 RNU1-13P-201ENST00000384499 162 ntBASIC4.42□□□□□ -1.7
CDK5RAP3Q96JB5 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CDK5RAP3Q96JB5 RAD23BP2-201ENST00000416003 1207 ntBASIC4.42□□□□□ -1.7
CDK5RAP3Q96JB5 MTCO3P12-201ENST00000416718 547 ntBASIC4.42□□□□□ -1.7
CDK5RAP3Q96JB5 RPS15AP12-201ENST00000419498 388 ntBASIC4.42□□□□□ -1.7
CDK5RAP3Q96JB5 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.42□□□□□ -1.7
CDK5RAP3Q96JB5 RPL21P66-201ENST00000426566 466 ntBASIC4.42□□□□□ -1.7
CDK5RAP3Q96JB5 AC011742.1-201ENST00000431448 434 ntBASIC4.42□□□□□ -1.7
CDK5RAP3Q96JB5 OR4K11P-201ENST00000431829 904 ntBASIC4.42□□□□□ -1.7
CDK5RAP3Q96JB5 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.42□□□□□ -1.7
CDK5RAP3Q96JB5 TPT1P14-201ENST00000448018 505 ntBASIC4.42□□□□□ -1.7
CDK5RAP3Q96JB5 RPS17P13-201ENST00000448974 407 ntBASIC4.42□□□□□ -1.7
CDK5RAP3Q96JB5 AC079448.1-201ENST00000449377 373 ntBASIC4.42□□□□□ -1.7
CDK5RAP3Q96JB5 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.42□□□□□ -1.7
CDK5RAP3Q96JB5 MTND1P9-201ENST00000453775 944 ntBASIC4.42□□□□□ -1.7
CDK5RAP3Q96JB5 CEACAMP4-201ENST00000457676 421 ntBASIC4.42□□□□□ -1.7
CDK5RAP3Q96JB5 NIPA2P2-201ENST00000496376 1083 ntBASIC4.42□□□□□ -1.7
CDK5RAP3Q96JB5 AC114967.1-201ENST00000504890 259 ntBASIC4.42□□□□□ -1.7
CDK5RAP3Q96JB5 HMGB1P22-201ENST00000505315 124 ntBASIC4.42□□□□□ -1.7
CDK5RAP3Q96JB5 AC108078.1-201ENST00000508073 725 ntBASIC4.42□□□□□ -1.7
CDK5RAP3Q96JB5 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC4.42□□□□□ -1.7
CDK5RAP3Q96JB5 MED28P5-201ENST00000528254 438 ntBASIC4.42□□□□□ -1.7
CDK5RAP3Q96JB5 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.42□□□□□ -1.7
CDK5RAP3Q96JB5 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.42□□□□□ -1.7
CDK5RAP3Q96JB5 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.42□□□□□ -1.7
CDK5RAP3Q96JB5 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.42□□□□□ -1.7
CDK5RAP3Q96JB5 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.42□□□□□ -1.7
CDK5RAP3Q96JB5 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms