Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.1□□□□□ -1.75
ATG4AQ8WYN0 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.1□□□□□ -1.75
ATG4AQ8WYN0 AC011451.2-201ENST00000604303 598 ntBASIC4.1□□□□□ -1.75
ATG4AQ8WYN0 AP003117.2-201ENST00000606010 545 ntBASIC4.1□□□□□ -1.75
ATG4AQ8WYN0 RMST_9.1-201ENST00000619945 193 ntBASIC4.1□□□□□ -1.75
ATG4AQ8WYN0 MIR8059-201ENST00000620427 81 ntBASIC4.1□□□□□ -1.75
ATG4AQ8WYN0 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.1□□□□□ -1.75
ATG4AQ8WYN0 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
ATG4AQ8WYN0 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
ATG4AQ8WYN0 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
ATG4AQ8WYN0 AL138713.1-201ENST00000624026 2130 ntBASIC4.1□□□□□ -1.75
ATG4AQ8WYN0 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC4.1□□□□□ -1.75
ATG4AQ8WYN0 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
ATG4AQ8WYN0 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
ATG4AQ8WYN0 AC010300.1-201ENST00000600671 5134 ntBASIC4.09□□□□□ -1.75
ATG4AQ8WYN0 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
ATG4AQ8WYN0 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
ATG4AQ8WYN0 DDX18P3-201ENST00000404856 2007 ntBASIC4.09□□□□□ -1.75
ATG4AQ8WYN0 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
ATG4AQ8WYN0 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
ATG4AQ8WYN0 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
ATG4AQ8WYN0 RNU6-1097P-201ENST00000363586 107 ntBASIC4.09□□□□□ -1.75
ATG4AQ8WYN0 RNA5SP56-201ENST00000410277 118 ntBASIC4.09□□□□□ -1.75
ATG4AQ8WYN0 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.09□□□□□ -1.75
ATG4AQ8WYN0 EIF4A1P3-201ENST00000411521 244 ntBASIC4.09□□□□□ -1.75
ATG4AQ8WYN0 RPL7AP73-201ENST00000413490 353 ntBASIC4.09□□□□□ -1.75
ATG4AQ8WYN0 AC009237.5-201ENST00000414271 501 ntBASIC4.09□□□□□ -1.75
ATG4AQ8WYN0 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.09□□□□□ -1.75
ATG4AQ8WYN0 AC005517.2-201ENST00000424673 553 ntBASIC4.09□□□□□ -1.75
ATG4AQ8WYN0 FAR2P4-202ENST00000425399 584 ntBASIC4.09□□□□□ -1.75
ATG4AQ8WYN0 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.09□□□□□ -1.75
ATG4AQ8WYN0 RPL7P54-201ENST00000438336 674 ntBASIC4.09□□□□□ -1.75
ATG4AQ8WYN0 HMGB3P12-201ENST00000438745 556 ntBASIC4.09□□□□□ -1.75
ATG4AQ8WYN0 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.09□□□□□ -1.75
ATG4AQ8WYN0 RPL21P89-201ENST00000444021 467 ntBASIC4.09□□□□□ -1.75
ATG4AQ8WYN0 RANP8-201ENST00000444720 713 ntBASIC4.09□□□□□ -1.75
ATG4AQ8WYN0 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC4.09□□□□□ -1.75
ATG4AQ8WYN0 AC108059.3-201ENST00000456388 214 ntBASIC4.09□□□□□ -1.75
ATG4AQ8WYN0 RNU6-420P-201ENST00000458780 107 ntBASIC4.09□□□□□ -1.75
ATG4AQ8WYN0 ST13P14-201ENST00000474095 734 ntBASIC4.09□□□□□ -1.75
ATG4AQ8WYN0 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
ATG4AQ8WYN0 RPS29P25-201ENST00000481709 171 ntBASIC4.09□□□□□ -1.75
ATG4AQ8WYN0 AC105137.1-201ENST00000484355 562 ntBASIC4.09□□□□□ -1.75
ATG4AQ8WYN0 RPL36AP51-201ENST00000487216 318 ntBASIC4.09□□□□□ -1.75
ATG4AQ8WYN0 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
ATG4AQ8WYN0 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.09□□□□□ -1.75
ATG4AQ8WYN0 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.09□□□□□ -1.75
ATG4AQ8WYN0 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.09□□□□□ -1.75
ATG4AQ8WYN0 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.09□□□□□ -1.75
ATG4AQ8WYN0 Y_RNA.702-201ENST00000516843 96 ntBASIC4.09□□□□□ -1.75
ATG4AQ8WYN0 SNORA20.3-201ENST00000516880 132 ntBASIC4.09□□□□□ -1.75
ATG4AQ8WYN0 RN7SKP116-201ENST00000516902 319 ntBASIC4.09□□□□□ -1.75
ATG4AQ8WYN0 OR8L1P-201ENST00000534005 955 ntBASIC4.09□□□□□ -1.75
ATG4AQ8WYN0 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.09□□□□□ -1.75
ATG4AQ8WYN0 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.09□□□□□ -1.75
ATG4AQ8WYN0 COX6CP3-201ENST00000580869 223 ntBASIC4.09□□□□□ -1.75
ATG4AQ8WYN0 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.09□□□□□ -1.75
ATG4AQ8WYN0 MIR3138-201ENST00000585238 82 ntBASIC4.09□□□□□ -1.75
ATG4AQ8WYN0 AC060780.3-201ENST00000589464 80 ntBASIC4.09□□□□□ -1.75
ATG4AQ8WYN0 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.09□□□□□ -1.75
ATG4AQ8WYN0 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
ATG4AQ8WYN0 AL669831.4-202ENST00000590817 238 ntBASIC4.09□□□□□ -1.75
ATG4AQ8WYN0 BNIP3P33-201ENST00000598912 569 ntBASIC4.09□□□□□ -1.75
ATG4AQ8WYN0 IPO5P1-202ENST00000600039 287 ntBASIC4.09□□□□□ -1.75
ATG4AQ8WYN0 AL162413.1-201ENST00000603198 110 ntBASIC4.09□□□□□ -1.75
ATG4AQ8WYN0 HMGB1P50-201ENST00000605814 607 ntBASIC4.09□□□□□ -1.75
ATG4AQ8WYN0 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.09□□□□□ -1.75
ATG4AQ8WYN0 AC105429.2-201ENST00000610567 517 ntBASIC4.09□□□□□ -1.75
ATG4AQ8WYN0 AC005609.4-201ENST00000625071 447 ntBASIC4.09□□□□□ -1.75
ATG4AQ8WYN0 SRP54-214ENST00000630962 162 ntTSL 5 BASIC4.09□□□□□ -1.75
ATG4AQ8WYN0 CASC19-280ENST00000642102 1351 ntBASIC4.09□□□□□ -1.75
ATG4AQ8WYN0 AC027287.1-201ENST00000553115 1453 ntBASIC4.09□□□□□ -1.75
ATG4AQ8WYN0 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.09□□□□□ -1.75
ATG4AQ8WYN0 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
ATG4AQ8WYN0 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.09□□□□□ -1.76
ATG4AQ8WYN0 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
ATG4AQ8WYN0 AL139811.1-201ENST00000424779 2299 ntBASIC4.09□□□□□ -1.76
ATG4AQ8WYN0 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.08□□□□□ -1.76
ATG4AQ8WYN0 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
ATG4AQ8WYN0 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
ATG4AQ8WYN0 RNU6-1120P-201ENST00000362988 108 ntBASIC4.08□□□□□ -1.76
ATG4AQ8WYN0 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
ATG4AQ8WYN0 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.08□□□□□ -1.76
ATG4AQ8WYN0 AL592437.2-201ENST00000421655 2434 ntBASIC4.08□□□□□ -1.76
ATG4AQ8WYN0 DNAJC19P7-201ENST00000428811 344 ntBASIC4.08□□□□□ -1.76
ATG4AQ8WYN0 RPS27AP12-201ENST00000429552 465 ntBASIC4.08□□□□□ -1.76
ATG4AQ8WYN0 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.08□□□□□ -1.76
ATG4AQ8WYN0 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC4.08□□□□□ -1.76
ATG4AQ8WYN0 AC083863.1-201ENST00000438811 231 ntBASIC4.08□□□□□ -1.76
ATG4AQ8WYN0 TPT1P14-201ENST00000448018 505 ntBASIC4.08□□□□□ -1.76
ATG4AQ8WYN0 AL500522.2-201ENST00000448562 343 ntBASIC4.08□□□□□ -1.76
ATG4AQ8WYN0 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.08□□□□□ -1.76
ATG4AQ8WYN0 FDX1P2-201ENST00000450769 375 ntBASIC4.08□□□□□ -1.76
ATG4AQ8WYN0 NANOGP10-201ENST00000453325 895 ntBASIC4.08□□□□□ -1.76
ATG4AQ8WYN0 UBDP1-202ENST00000457888 382 ntBASIC4.08□□□□□ -1.76
ATG4AQ8WYN0 HMGB1P25-201ENST00000468402 607 ntBASIC4.08□□□□□ -1.76
ATG4AQ8WYN0 RN7SL860P-201ENST00000473738 223 ntBASIC4.08□□□□□ -1.76
ATG4AQ8WYN0 AL132838.2-201ENST00000492041 314 ntBASIC4.08□□□□□ -1.76
ATG4AQ8WYN0 AC020893.1-201ENST00000502452 580 ntBASIC4.08□□□□□ -1.76
ATG4AQ8WYN0 AC098799.2-201ENST00000509466 868 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 157.6 ms