Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 SNORA40.18-201ENST00000391200 128 ntBASIC2.43□□□□□ -2.02
RTL9Q8NET4 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC2.43□□□□□ -2.02
RTL9Q8NET4 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.43□□□□□ -2.02
RTL9Q8NET4 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC2.43□□□□□ -2.02
RTL9Q8NET4 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.43□□□□□ -2.02
RTL9Q8NET4 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.43□□□□□ -2.02
RTL9Q8NET4 AC003989.2-201ENST00000440224 169 ntBASIC2.43□□□□□ -2.02
RTL9Q8NET4 RPS26P30-201ENST00000443431 335 ntBASIC2.43□□□□□ -2.02
RTL9Q8NET4 RPL31P53-201ENST00000457065 348 ntBASIC2.43□□□□□ -2.02
RTL9Q8NET4 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
RTL9Q8NET4 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC2.43□□□□□ -2.02
RTL9Q8NET4 RNA5SP82-201ENST00000516707 92 ntBASIC2.43□□□□□ -2.02
RTL9Q8NET4 PCNAP1-202ENST00000595299 752 ntBASIC2.43□□□□□ -2.02
RTL9Q8NET4 SNRPGP19-201ENST00000603826 189 ntBASIC2.43□□□□□ -2.02
RTL9Q8NET4 AL121917.1-203ENST00000605534 577 ntBASIC2.43□□□□□ -2.02
RTL9Q8NET4 AL391813.2-201ENST00000609113 322 ntBASIC2.43□□□□□ -2.02
RTL9Q8NET4 MIR6895-201ENST00000613497 78 ntBASIC2.43□□□□□ -2.02
RTL9Q8NET4 AC012321.1-201ENST00000561622 1588 ntBASIC2.42□□□□□ -2.02
RTL9Q8NET4 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.42□□□□□ -2.02
RTL9Q8NET4 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
RTL9Q8NET4 RNA5SP391-201ENST00000363456 119 ntBASIC2.42□□□□□ -2.02
RTL9Q8NET4 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC2.42□□□□□ -2.02
RTL9Q8NET4 RPL23AP36-201ENST00000413895 458 ntBASIC2.42□□□□□ -2.02
RTL9Q8NET4 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.42□□□□□ -2.02
RTL9Q8NET4 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.42□□□□□ -2.02
RTL9Q8NET4 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC2.42□□□□□ -2.02
RTL9Q8NET4 RNA5SP468-201ENST00000516782 93 ntBASIC2.42□□□□□ -2.02
RTL9Q8NET4 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.42□□□□□ -2.02
RTL9Q8NET4 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
RTL9Q8NET4 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.42□□□□□ -2.02
RTL9Q8NET4 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC2.42□□□□□ -2.02
RTL9Q8NET4 MTND4LP24-201ENST00000572277 291 ntBASIC2.42□□□□□ -2.02
RTL9Q8NET4 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC2.42□□□□□ -2.02
RTL9Q8NET4 AC103810.1-201ENST00000579873 453 ntBASIC2.42□□□□□ -2.02
RTL9Q8NET4 AC008962.1-201ENST00000605729 304 ntBASIC2.42□□□□□ -2.02
RTL9Q8NET4 AC244517.12-201ENST00000623581 663 ntBASIC2.42□□□□□ -2.02
RTL9Q8NET4 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
RTL9Q8NET4 ZNF734P-201ENST00000419494 1534 ntBASIC2.42□□□□□ -2.02
RTL9Q8NET4 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
RTL9Q8NET4 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
RTL9Q8NET4 PABPC1P7-201ENST00000413177 1513 ntBASIC2.41□□□□□ -2.02
RTL9Q8NET4 SNORA67.1-201ENST00000364749 141 ntBASIC2.41□□□□□ -2.02
RTL9Q8NET4 DNAJC19P6-201ENST00000401853 280 ntBASIC2.41□□□□□ -2.02
RTL9Q8NET4 AC019129.1-201ENST00000403786 261 ntBASIC2.41□□□□□ -2.02
RTL9Q8NET4 HNRNPDP2-201ENST00000406475 478 ntBASIC2.41□□□□□ -2.02
RTL9Q8NET4 AC027124.2-201ENST00000428249 105 ntBASIC2.41□□□□□ -2.02
RTL9Q8NET4 AL157827.1-201ENST00000447622 132 ntBASIC2.41□□□□□ -2.02
RTL9Q8NET4 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.41□□□□□ -2.02
RTL9Q8NET4 RPL31P20-201ENST00000449593 360 ntBASIC2.41□□□□□ -2.02
RTL9Q8NET4 HMGB1P1-201ENST00000522557 636 ntBASIC2.41□□□□□ -2.02
RTL9Q8NET4 AP003385.6-201ENST00000531603 374 ntBASIC2.41□□□□□ -2.02
RTL9Q8NET4 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.41□□□□□ -2.02
RTL9Q8NET4 GNAI2P1-201ENST00000541815 315 ntBASIC2.41□□□□□ -2.02
RTL9Q8NET4 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC2.41□□□□□ -2.02
RTL9Q8NET4 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.41□□□□□ -2.02
RTL9Q8NET4 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.41□□□□□ -2.02
RTL9Q8NET4 AC023043.2-201ENST00000589678 1026 ntBASIC2.41□□□□□ -2.02
RTL9Q8NET4 AC009220.3-201ENST00000604318 586 ntBASIC2.41□□□□□ -2.02
RTL9Q8NET4 MIR7973-1-201ENST00000614683 76 ntBASIC2.41□□□□□ -2.02
RTL9Q8NET4 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC2.41□□□□□ -2.02
RTL9Q8NET4 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
RTL9Q8NET4 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.4□□□□□ -2.02
RTL9Q8NET4 AC008173.1-201ENST00000418901 264 ntBASIC2.4□□□□□ -2.02
RTL9Q8NET4 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.4□□□□□ -2.02
RTL9Q8NET4 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.4□□□□□ -2.02
RTL9Q8NET4 RPL23AP63-201ENST00000498752 471 ntBASIC2.4□□□□□ -2.02
RTL9Q8NET4 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.02
RTL9Q8NET4 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.4□□□□□ -2.02
RTL9Q8NET4 RNU1-104P-201ENST00000517280 175 ntBASIC2.4□□□□□ -2.02
RTL9Q8NET4 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.4□□□□□ -2.02
RTL9Q8NET4 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC2.4□□□□□ -2.02
RTL9Q8NET4 AC007115.1-201ENST00000546853 234 ntBASIC2.4□□□□□ -2.02
RTL9Q8NET4 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.4□□□□□ -2.02
RTL9Q8NET4 VIS1.1-201ENST00000610517 203 ntBASIC2.4□□□□□ -2.02
RTL9Q8NET4 MIR4496-201ENST00000635896 61 ntBASIC2.4□□□□□ -2.02
RTL9Q8NET4 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
RTL9Q8NET4 AC080128.1-201ENST00000474389 1917 ntBASIC2.4□□□□□ -2.03
RTL9Q8NET4 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
RTL9Q8NET4 AL139276.1-201ENST00000311910 1001 ntBASIC2.39□□□□□ -2.03
RTL9Q8NET4 RNU6-673P-201ENST00000365084 104 ntBASIC2.39□□□□□ -2.03
RTL9Q8NET4 SET-203ENST00000372688 801 ntTSL 2 BASIC2.39□□□□□ -2.03
RTL9Q8NET4 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.39□□□□□ -2.03
RTL9Q8NET4 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
RTL9Q8NET4 OR4K11P-201ENST00000431829 904 ntBASIC2.39□□□□□ -2.03
RTL9Q8NET4 AL513343.1-201ENST00000451818 792 ntBASIC2.39□□□□□ -2.03
RTL9Q8NET4 AC025033.1-201ENST00000463883 194 ntBASIC2.39□□□□□ -2.03
RTL9Q8NET4 AC087879.1-201ENST00000474343 374 ntBASIC2.39□□□□□ -2.03
RTL9Q8NET4 CDC42P4-201ENST00000510507 563 ntBASIC2.39□□□□□ -2.03
RTL9Q8NET4 RNU6-1308P-201ENST00000516817 103 ntBASIC2.39□□□□□ -2.03
RTL9Q8NET4 IGLV3-17-201ENST00000519099 244 ntBASIC2.39□□□□□ -2.03
RTL9Q8NET4 FAM92A1P1-201ENST00000528023 890 ntBASIC2.39□□□□□ -2.03
RTL9Q8NET4 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.39□□□□□ -2.03
RTL9Q8NET4 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
RTL9Q8NET4 AC009314.1-201ENST00000603871 304 ntBASIC2.39□□□□□ -2.03
RTL9Q8NET4 AC011472.4-201ENST00000615848 491 ntBASIC2.39□□□□□ -2.03
RTL9Q8NET4 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.39□□□□□ -2.03
RTL9Q8NET4 ADAM3A-203ENST00000461344 2157 ntBASIC2.39□□□□□ -2.03
RTL9Q8NET4 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
RTL9Q8NET4 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.39□□□□□ -2.03
RTL9Q8NET4 CKAP2P1-201ENST00000555477 2049 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms