Protein–RNA interactions for Protein: Q8NCR9

CLRN3, Clarin-3, humanhuman

Predictions only

Length 226 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3Q8NCR9 AC026464.5-201ENST00000562497 722 ntBASIC4.09□□□□□ -1.75
CLRN3Q8NCR9 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.09□□□□□ -1.75
CLRN3Q8NCR9 AC053481.4-201ENST00000583164 216 ntBASIC4.09□□□□□ -1.75
CLRN3Q8NCR9 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.09□□□□□ -1.75
CLRN3Q8NCR9 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC4.09□□□□□ -1.75
CLRN3Q8NCR9 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.09□□□□□ -1.75
CLRN3Q8NCR9 AC103710.3-201ENST00000608157 948 ntBASIC4.09□□□□□ -1.75
CLRN3Q8NCR9 AL132765.2-201ENST00000610812 351 ntBASIC4.09□□□□□ -1.75
CLRN3Q8NCR9 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.09□□□□□ -1.75
CLRN3Q8NCR9 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.09□□□□□ -1.75
CLRN3Q8NCR9 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CLRN3Q8NCR9 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.09□□□□□ -1.75
CLRN3Q8NCR9 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.09□□□□□ -1.75
CLRN3Q8NCR9 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
CLRN3Q8NCR9 AC007785.2-201ENST00000598627 1916 ntBASIC4.09□□□□□ -1.76
CLRN3Q8NCR9 OR56B2P-202ENST00000641377 2453 ntBASIC4.09□□□□□ -1.76
CLRN3Q8NCR9 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
CLRN3Q8NCR9 RNU1-83P-201ENST00000363426 164 ntBASIC4.08□□□□□ -1.76
CLRN3Q8NCR9 RNU1-65P-201ENST00000363919 148 ntBASIC4.08□□□□□ -1.76
CLRN3Q8NCR9 RNU6-694P-201ENST00000364071 147 ntBASIC4.08□□□□□ -1.76
CLRN3Q8NCR9 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CLRN3Q8NCR9 TINAG-203ENST00000370869 782 ntTSL 3 BASIC4.08□□□□□ -1.76
CLRN3Q8NCR9 Y_RNA.480-201ENST00000384364 102 ntBASIC4.08□□□□□ -1.76
CLRN3Q8NCR9 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
CLRN3Q8NCR9 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.08□□□□□ -1.76
CLRN3Q8NCR9 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC4.08□□□□□ -1.76
CLRN3Q8NCR9 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.08□□□□□ -1.76
CLRN3Q8NCR9 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC4.08□□□□□ -1.76
CLRN3Q8NCR9 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.08□□□□□ -1.76
CLRN3Q8NCR9 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC4.08□□□□□ -1.76
CLRN3Q8NCR9 AL451139.1-201ENST00000434718 346 ntBASIC4.08□□□□□ -1.76
CLRN3Q8NCR9 LINC00328-2P-201ENST00000436585 219 ntBASIC4.08□□□□□ -1.76
CLRN3Q8NCR9 HMGB1P12-201ENST00000438594 598 ntBASIC4.08□□□□□ -1.76
CLRN3Q8NCR9 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.08□□□□□ -1.76
CLRN3Q8NCR9 HMGB1P18-201ENST00000438801 619 ntBASIC4.08□□□□□ -1.76
CLRN3Q8NCR9 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4.08□□□□□ -1.76
CLRN3Q8NCR9 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.08□□□□□ -1.76
CLRN3Q8NCR9 TIMM8BP2-201ENST00000445940 251 ntBASIC4.08□□□□□ -1.76
CLRN3Q8NCR9 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.08□□□□□ -1.76
CLRN3Q8NCR9 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.08□□□□□ -1.76
CLRN3Q8NCR9 RN7SL269P-201ENST00000467795 305 ntBASIC4.08□□□□□ -1.76
CLRN3Q8NCR9 AC098818.1-201ENST00000478593 252 ntBASIC4.08□□□□□ -1.76
CLRN3Q8NCR9 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.08□□□□□ -1.76
CLRN3Q8NCR9 RPS4XP1-201ENST00000482189 787 ntBASIC4.08□□□□□ -1.76
CLRN3Q8NCR9 AP002812.1-201ENST00000495378 474 ntBASIC4.08□□□□□ -1.76
CLRN3Q8NCR9 Y_RNA.675-201ENST00000516389 149 ntBASIC4.08□□□□□ -1.76
CLRN3Q8NCR9 Y_RNA.691-201ENST00000516611 103 ntBASIC4.08□□□□□ -1.76
CLRN3Q8NCR9 RN7SKP289-201ENST00000517244 295 ntBASIC4.08□□□□□ -1.76
CLRN3Q8NCR9 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.08□□□□□ -1.76
CLRN3Q8NCR9 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.08□□□□□ -1.76
CLRN3Q8NCR9 CYCSP27-201ENST00000527643 293 ntBASIC4.08□□□□□ -1.76
CLRN3Q8NCR9 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC4.08□□□□□ -1.76
CLRN3Q8NCR9 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CLRN3Q8NCR9 AC135001.1-201ENST00000544546 283 ntBASIC4.08□□□□□ -1.76
CLRN3Q8NCR9 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
CLRN3Q8NCR9 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC4.08□□□□□ -1.76
CLRN3Q8NCR9 TRAV28-201ENST00000557548 323 ntBASIC4.08□□□□□ -1.76
CLRN3Q8NCR9 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4.08□□□□□ -1.76
CLRN3Q8NCR9 HSPE1P5-201ENST00000561489 272 ntBASIC4.08□□□□□ -1.76
CLRN3Q8NCR9 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC4.08□□□□□ -1.76
CLRN3Q8NCR9 MIR1273C-201ENST00000578669 77 ntBASIC4.08□□□□□ -1.76
CLRN3Q8NCR9 AC093227.2-201ENST00000589357 285 ntBASIC4.08□□□□□ -1.76
CLRN3Q8NCR9 AC020910.2-201ENST00000603635 610 ntBASIC4.08□□□□□ -1.76
CLRN3Q8NCR9 CTHRC1P1-201ENST00000605383 469 ntBASIC4.08□□□□□ -1.76
CLRN3Q8NCR9 AC104237.2-201ENST00000612456 443 ntBASIC4.08□□□□□ -1.76
CLRN3Q8NCR9 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.08□□□□□ -1.76
CLRN3Q8NCR9 AC007546.1-201ENST00000619452 559 ntBASIC4.08□□□□□ -1.76
CLRN3Q8NCR9 AC090740.1-201ENST00000623193 2262 ntBASIC4.08□□□□□ -1.76
CLRN3Q8NCR9 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
CLRN3Q8NCR9 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
CLRN3Q8NCR9 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CLRN3Q8NCR9 AL359693.1-201ENST00000614959 2407 ntBASIC4.07□□□□□ -1.76
CLRN3Q8NCR9 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CLRN3Q8NCR9 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
CLRN3Q8NCR9 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
CLRN3Q8NCR9 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CLRN3Q8NCR9 SNORD74.4-201ENST00000364129 80 ntBASIC4.07□□□□□ -1.76
CLRN3Q8NCR9 RNU6-395P-201ENST00000365662 106 ntBASIC4.07□□□□□ -1.76
CLRN3Q8NCR9 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CLRN3Q8NCR9 MIR493-201ENST00000385254 89 ntBASIC4.07□□□□□ -1.76
CLRN3Q8NCR9 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CLRN3Q8NCR9 AC016739.1-201ENST00000405359 345 ntBASIC4.07□□□□□ -1.76
CLRN3Q8NCR9 RPA3-204ENST00000406109 434 ntTSL 3 BASIC4.07□□□□□ -1.76
CLRN3Q8NCR9 RNA5SP198-201ENST00000410376 127 ntBASIC4.07□□□□□ -1.76
CLRN3Q8NCR9 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC4.07□□□□□ -1.76
CLRN3Q8NCR9 VDAC1P9-201ENST00000412766 841 ntBASIC4.07□□□□□ -1.76
CLRN3Q8NCR9 AL139095.3-201ENST00000419672 1203 ntBASIC4.07□□□□□ -1.76
CLRN3Q8NCR9 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CLRN3Q8NCR9 Z82210.1-201ENST00000440037 231 ntBASIC4.07□□□□□ -1.76
CLRN3Q8NCR9 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC4.07□□□□□ -1.76
CLRN3Q8NCR9 PIGFP3-201ENST00000441918 722 ntBASIC4.07□□□□□ -1.76
CLRN3Q8NCR9 RPS24P13-201ENST00000442520 397 ntBASIC4.07□□□□□ -1.76
CLRN3Q8NCR9 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC4.07□□□□□ -1.76
CLRN3Q8NCR9 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.07□□□□□ -1.76
CLRN3Q8NCR9 FABP5P15-201ENST00000453566 214 ntBASIC4.07□□□□□ -1.76
CLRN3Q8NCR9 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.07□□□□□ -1.76
CLRN3Q8NCR9 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CLRN3Q8NCR9 AMD1P1-201ENST00000457220 922 ntBASIC4.07□□□□□ -1.76
CLRN3Q8NCR9 RPL7P5-201ENST00000471472 736 ntBASIC4.07□□□□□ -1.76
CLRN3Q8NCR9 AC092865.4-201ENST00000477936 615 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms