Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 AL138799.3-201ENST00000438968 350 ntBASIC5.44□□□□□ -1.54
USP48Q86UV5 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC5.44□□□□□ -1.54
USP48Q86UV5 AC006480.1-201ENST00000449887 378 ntBASIC5.44□□□□□ -1.54
USP48Q86UV5 AC078785.3-201ENST00000476607 425 ntBASIC5.44□□□□□ -1.54
USP48Q86UV5 AC233702.1-201ENST00000482905 502 ntBASIC5.44□□□□□ -1.54
USP48Q86UV5 RPL39P36-201ENST00000490784 156 ntBASIC5.44□□□□□ -1.54
USP48Q86UV5 AC139783.2-201ENST00000504847 1145 ntBASIC5.44□□□□□ -1.54
USP48Q86UV5 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
USP48Q86UV5 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.44□□□□□ -1.54
USP48Q86UV5 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC5.44□□□□□ -1.54
USP48Q86UV5 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.44□□□□□ -1.54
USP48Q86UV5 RNA5SP446-201ENST00000515955 82 ntBASIC5.44□□□□□ -1.54
USP48Q86UV5 SNORD60.2-201ENST00000516883 86 ntBASIC5.44□□□□□ -1.54
USP48Q86UV5 AC103783.1-201ENST00000520506 373 ntBASIC5.44□□□□□ -1.54
USP48Q86UV5 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.44□□□□□ -1.54
USP48Q86UV5 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC5.44□□□□□ -1.54
USP48Q86UV5 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC5.44□□□□□ -1.54
USP48Q86UV5 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC5.44□□□□□ -1.54
USP48Q86UV5 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC5.44□□□□□ -1.54
USP48Q86UV5 AC064836.2-201ENST00000609491 462 ntBASIC5.44□□□□□ -1.54
USP48Q86UV5 5S_rRNA.16-201ENST00000612928 119 ntBASIC5.44□□□□□ -1.54
USP48Q86UV5 AC093838.1-201ENST00000613014 469 ntBASIC5.44□□□□□ -1.54
USP48Q86UV5 AC131238.1-201ENST00000617135 328 ntBASIC5.44□□□□□ -1.54
USP48Q86UV5 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.44□□□□□ -1.54
USP48Q86UV5 AC067931.1-201ENST00000624190 671 ntBASIC5.44□□□□□ -1.54
USP48Q86UV5 AC112487.2-201ENST00000637950 304 ntBASIC5.44□□□□□ -1.54
USP48Q86UV5 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
USP48Q86UV5 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
USP48Q86UV5 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.44□□□□□ -1.54
USP48Q86UV5 AC092435.4-201ENST00000623012 4159 ntBASIC5.44□□□□□ -1.54
USP48Q86UV5 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
USP48Q86UV5 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
USP48Q86UV5 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC5.44□□□□□ -1.54
USP48Q86UV5 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.44□□□□□ -1.54
USP48Q86UV5 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
USP48Q86UV5 PAPPA-AS1-201ENST00000445861 2450 ntBASIC5.43□□□□□ -1.54
USP48Q86UV5 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
USP48Q86UV5 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
USP48Q86UV5 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
USP48Q86UV5 MIR208A-201ENST00000362287 71 ntBASIC5.43□□□□□ -1.54
USP48Q86UV5 Y_RNA.22-201ENST00000362492 102 ntBASIC5.43□□□□□ -1.54
USP48Q86UV5 Y_RNA.255-201ENST00000364581 97 ntBASIC5.43□□□□□ -1.54
USP48Q86UV5 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
USP48Q86UV5 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
USP48Q86UV5 SDHCP2-201ENST00000398565 501 ntBASIC5.43□□□□□ -1.54
USP48Q86UV5 EEF1A1P40-201ENST00000412883 573 ntBASIC5.43□□□□□ -1.54
USP48Q86UV5 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC5.43□□□□□ -1.54
USP48Q86UV5 AC016696.1-201ENST00000446949 318 ntBASIC5.43□□□□□ -1.54
USP48Q86UV5 CACYBPP2-201ENST00000453625 678 ntBASIC5.43□□□□□ -1.54
USP48Q86UV5 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC5.43□□□□□ -1.54
USP48Q86UV5 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC5.43□□□□□ -1.54
USP48Q86UV5 snoU13.3-201ENST00000459441 104 ntBASIC5.43□□□□□ -1.54
USP48Q86UV5 RPS27AP17-201ENST00000463344 455 ntBASIC5.43□□□□□ -1.54
USP48Q86UV5 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC5.43□□□□□ -1.54
USP48Q86UV5 RPS3AP50-201ENST00000487064 803 ntBASIC5.43□□□□□ -1.54
USP48Q86UV5 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
USP48Q86UV5 AC135721.1-201ENST00000497954 479 ntBASIC5.43□□□□□ -1.54
USP48Q86UV5 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC5.43□□□□□ -1.54
USP48Q86UV5 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC5.43□□□□□ -1.54
USP48Q86UV5 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
USP48Q86UV5 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC5.43□□□□□ -1.54
USP48Q86UV5 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.43□□□□□ -1.54
USP48Q86UV5 AL031666.3-201ENST00000609320 1006 ntBASIC5.43□□□□□ -1.54
USP48Q86UV5 AC009233.1-201ENST00000616477 371 ntBASIC5.43□□□□□ -1.54
USP48Q86UV5 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
USP48Q86UV5 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
USP48Q86UV5 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
USP48Q86UV5 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
USP48Q86UV5 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
USP48Q86UV5 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
USP48Q86UV5 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
USP48Q86UV5 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
USP48Q86UV5 MAPK10-303ENST00000641324 3959 ntBASIC5.42□□□□□ -1.54
USP48Q86UV5 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
USP48Q86UV5 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
USP48Q86UV5 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.42□□□□□ -1.54
USP48Q86UV5 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.42□□□□□ -1.54
USP48Q86UV5 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
USP48Q86UV5 MIR383-201ENST00000362257 73 ntBASIC5.42□□□□□ -1.54
USP48Q86UV5 RNU6-996P-201ENST00000365438 107 ntBASIC5.42□□□□□ -1.54
USP48Q86UV5 MT-TD-201ENST00000387419 68 ntBASIC5.42□□□□□ -1.54
USP48Q86UV5 RNU6-754P-201ENST00000391166 107 ntBASIC5.42□□□□□ -1.54
USP48Q86UV5 HDGFP1-201ENST00000405943 252 ntBASIC5.42□□□□□ -1.54
USP48Q86UV5 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.42□□□□□ -1.54
USP48Q86UV5 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
USP48Q86UV5 OR2AS1P-201ENST00000427827 319 ntBASIC5.42□□□□□ -1.54
USP48Q86UV5 AC006512.1-201ENST00000468816 291 ntBASIC5.42□□□□□ -1.54
USP48Q86UV5 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC5.42□□□□□ -1.54
USP48Q86UV5 RNU6-64P-201ENST00000517119 105 ntBASIC5.42□□□□□ -1.54
USP48Q86UV5 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC5.42□□□□□ -1.54
USP48Q86UV5 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC5.42□□□□□ -1.54
USP48Q86UV5 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.42□□□□□ -1.54
USP48Q86UV5 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.42□□□□□ -1.54
USP48Q86UV5 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC5.42□□□□□ -1.54
USP48Q86UV5 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC5.42□□□□□ -1.54
USP48Q86UV5 LLPHP1-201ENST00000603571 367 ntBASIC5.42□□□□□ -1.54
USP48Q86UV5 AL121992.2-201ENST00000606262 256 ntBASIC5.42□□□□□ -1.54
USP48Q86UV5 AC130324.3-201ENST00000614165 542 ntBASIC5.42□□□□□ -1.54
USP48Q86UV5 AC099669.2-201ENST00000616549 437 ntBASIC5.42□□□□□ -1.54
USP48Q86UV5 AL136313.1-201ENST00000624804 202 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms