Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 MIR4325-201ENST00000583049 90 ntBASIC3.05□□□□□ -1.92
ATL3Q6DD88 MIR4635-201ENST00000583759 79 ntBASIC3.05□□□□□ -1.92
ATL3Q6DD88 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC3.05□□□□□ -1.92
ATL3Q6DD88 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.05□□□□□ -1.92
ATL3Q6DD88 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.05□□□□□ -1.92
ATL3Q6DD88 AC106028.5-201ENST00000610332 395 ntBASIC3.05□□□□□ -1.92
ATL3Q6DD88 AL158163.2-201ENST00000619110 700 ntBASIC3.05□□□□□ -1.92
ATL3Q6DD88 AC084824.4-201ENST00000620106 731 ntBASIC3.05□□□□□ -1.92
ATL3Q6DD88 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.05□□□□□ -1.92
ATL3Q6DD88 AP000676.4-201ENST00000624659 623 ntBASIC3.05□□□□□ -1.92
ATL3Q6DD88 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.05□□□□□ -1.92
ATL3Q6DD88 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
ATL3Q6DD88 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
ATL3Q6DD88 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
ATL3Q6DD88 SNORA14A-201ENST00000364773 135 ntBASIC3.04□□□□□ -1.92
ATL3Q6DD88 CD24P4-201ENST00000382840 243 ntBASIC3.04□□□□□ -1.92
ATL3Q6DD88 RNU6-1027P-201ENST00000383998 107 ntBASIC3.04□□□□□ -1.92
ATL3Q6DD88 RNU2-28P-201ENST00000410457 189 ntBASIC3.04□□□□□ -1.92
ATL3Q6DD88 OR4K6P-201ENST00000416478 897 ntBASIC3.04□□□□□ -1.92
ATL3Q6DD88 MTCO1P39-201ENST00000426148 480 ntBASIC3.04□□□□□ -1.92
ATL3Q6DD88 DPRXP1-201ENST00000426312 460 ntBASIC3.04□□□□□ -1.92
ATL3Q6DD88 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.04□□□□□ -1.92
ATL3Q6DD88 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
ATL3Q6DD88 S100A11P2-201ENST00000467589 312 ntBASIC3.04□□□□□ -1.92
ATL3Q6DD88 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.04□□□□□ -1.92
ATL3Q6DD88 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.04□□□□□ -1.92
ATL3Q6DD88 MTCYBP16-201ENST00000509187 1129 ntBASIC3.04□□□□□ -1.92
ATL3Q6DD88 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.04□□□□□ -1.92
ATL3Q6DD88 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.04□□□□□ -1.92
ATL3Q6DD88 RNU6-276P-201ENST00000516114 96 ntBASIC3.04□□□□□ -1.92
ATL3Q6DD88 AC091163.3-201ENST00000518269 1144 ntBASIC3.04□□□□□ -1.92
ATL3Q6DD88 AC087808.1-201ENST00000520501 361 ntBASIC3.04□□□□□ -1.92
ATL3Q6DD88 AP001804.3-201ENST00000525146 880 ntBASIC3.04□□□□□ -1.92
ATL3Q6DD88 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.04□□□□□ -1.92
ATL3Q6DD88 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.04□□□□□ -1.92
ATL3Q6DD88 AC138915.2-201ENST00000569776 97 ntBASIC3.04□□□□□ -1.92
ATL3Q6DD88 MIR3908-201ENST00000579798 126 ntBASIC3.04□□□□□ -1.92
ATL3Q6DD88 COX6CP3-201ENST00000580869 223 ntBASIC3.04□□□□□ -1.92
ATL3Q6DD88 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.04□□□□□ -1.92
ATL3Q6DD88 AP001330.4-201ENST00000604350 154 ntBASIC3.04□□□□□ -1.92
ATL3Q6DD88 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC3.04□□□□□ -1.92
ATL3Q6DD88 ATP5A1P2-202ENST00000616464 443 ntBASIC3.04□□□□□ -1.92
ATL3Q6DD88 MIR6076-201ENST00000617521 113 ntBASIC3.04□□□□□ -1.92
ATL3Q6DD88 AC244100.1-202ENST00000621554 382 ntBASIC3.04□□□□□ -1.92
ATL3Q6DD88 AC091925.2-201ENST00000625059 256 ntBASIC3.04□□□□□ -1.92
ATL3Q6DD88 AC099654.8-201ENST00000637757 681 ntBASIC3.04□□□□□ -1.92
ATL3Q6DD88 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.04□□□□□ -1.92
ATL3Q6DD88 Z82195.2-201ENST00000612348 18351 ntBASIC3.03□□□□□ -1.92
ATL3Q6DD88 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
ATL3Q6DD88 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
ATL3Q6DD88 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
ATL3Q6DD88 RNU6-216P-201ENST00000363282 104 ntBASIC3.03□□□□□ -1.92
ATL3Q6DD88 RNU5D-1-201ENST00000363299 116 ntBASIC3.03□□□□□ -1.92
ATL3Q6DD88 SNORD46.1-201ENST00000364139 104 ntBASIC3.03□□□□□ -1.92
ATL3Q6DD88 SNORA18.3-201ENST00000384122 132 ntBASIC3.03□□□□□ -1.92
ATL3Q6DD88 SNORA40.2-201ENST00000390847 128 ntBASIC3.03□□□□□ -1.92
ATL3Q6DD88 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
ATL3Q6DD88 AL136372.1-201ENST00000403060 228 ntBASIC3.03□□□□□ -1.92
ATL3Q6DD88 SNORA11.1-201ENST00000408133 129 ntBASIC3.03□□□□□ -1.92
ATL3Q6DD88 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.03□□□□□ -1.92
ATL3Q6DD88 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.03□□□□□ -1.92
ATL3Q6DD88 UBE2D3P2-201ENST00000424409 445 ntBASIC3.03□□□□□ -1.92
ATL3Q6DD88 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC3.03□□□□□ -1.92
ATL3Q6DD88 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.03□□□□□ -1.92
ATL3Q6DD88 AC109583.1-201ENST00000432156 268 ntBASIC3.03□□□□□ -1.92
ATL3Q6DD88 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.03□□□□□ -1.92
ATL3Q6DD88 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.03□□□□□ -1.92
ATL3Q6DD88 AC004866.2-201ENST00000438285 481 ntBASIC3.03□□□□□ -1.92
ATL3Q6DD88 AC011816.1-201ENST00000441346 546 ntBASIC3.03□□□□□ -1.92
ATL3Q6DD88 RSL24D1P3-201ENST00000449255 495 ntBASIC3.03□□□□□ -1.92
ATL3Q6DD88 USP9YP34-201ENST00000453983 808 ntBASIC3.03□□□□□ -1.92
ATL3Q6DD88 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC3.03□□□□□ -1.92
ATL3Q6DD88 MTND2P39-201ENST00000457230 764 ntBASIC3.03□□□□□ -1.92
ATL3Q6DD88 PNPLA4P1-201ENST00000458328 305 ntBASIC3.03□□□□□ -1.92
ATL3Q6DD88 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.03□□□□□ -1.92
ATL3Q6DD88 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.03□□□□□ -1.92
ATL3Q6DD88 AC104986.1-201ENST00000517978 436 ntBASIC3.03□□□□□ -1.92
ATL3Q6DD88 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.03□□□□□ -1.92
ATL3Q6DD88 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.03□□□□□ -1.92
ATL3Q6DD88 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.03□□□□□ -1.92
ATL3Q6DD88 DNAJC8P1-201ENST00000554535 372 ntBASIC3.03□□□□□ -1.92
ATL3Q6DD88 AC012669.1-201ENST00000603209 283 ntBASIC3.03□□□□□ -1.92
ATL3Q6DD88 AC024220.1-201ENST00000603675 484 ntBASIC3.03□□□□□ -1.92
ATL3Q6DD88 AL035411.2-201ENST00000604022 421 ntBASIC3.03□□□□□ -1.92
ATL3Q6DD88 AC009570.1-201ENST00000609599 745 ntBASIC3.03□□□□□ -1.92
ATL3Q6DD88 AL109620.1-201ENST00000618738 1197 ntBASIC3.03□□□□□ -1.92
ATL3Q6DD88 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
ATL3Q6DD88 AC006378.2-201ENST00000623178 2476 ntBASIC3.03□□□□□ -1.92
ATL3Q6DD88 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
ATL3Q6DD88 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.03□□□□□ -1.93
ATL3Q6DD88 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.02□□□□□ -1.93
ATL3Q6DD88 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
ATL3Q6DD88 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
ATL3Q6DD88 RNU6-525P-201ENST00000363685 104 ntBASIC3.02□□□□□ -1.93
ATL3Q6DD88 RNU1-112P-201ENST00000364401 164 ntBASIC3.02□□□□□ -1.93
ATL3Q6DD88 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
ATL3Q6DD88 Y_RNA.408-201ENST00000383987 102 ntBASIC3.02□□□□□ -1.93
ATL3Q6DD88 SNORA1.3-201ENST00000384676 136 ntBASIC3.02□□□□□ -1.93
ATL3Q6DD88 MIR122-201ENST00000385044 85 ntBASIC3.02□□□□□ -1.93
ATL3Q6DD88 Y_RNA.578-201ENST00000390903 88 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms