Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC38Q502W7 TBCAP1-201ENST00000436520 327 ntBASIC4.04□□□□□ -1.76
CCDC38Q502W7 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC4.04□□□□□ -1.76
CCDC38Q502W7 PGBD4P3-201ENST00000440731 581 ntBASIC4.04□□□□□ -1.76
CCDC38Q502W7 AL662791.1-201ENST00000441992 928 ntBASIC4.04□□□□□ -1.76
CCDC38Q502W7 HMGB3P8-201ENST00000449709 577 ntBASIC4.04□□□□□ -1.76
CCDC38Q502W7 AC010618.1-201ENST00000469924 477 ntBASIC4.04□□□□□ -1.76
CCDC38Q502W7 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.04□□□□□ -1.76
CCDC38Q502W7 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC38Q502W7 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC38Q502W7 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC38Q502W7 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4.04□□□□□ -1.76
CCDC38Q502W7 MTND4P2-201ENST00000507767 1203 ntBASIC4.04□□□□□ -1.76
CCDC38Q502W7 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.04□□□□□ -1.76
CCDC38Q502W7 FTH1P21-201ENST00000512179 511 ntBASIC4.04□□□□□ -1.76
CCDC38Q502W7 IGKV2-23-201ENST00000518729 323 ntBASIC4.04□□□□□ -1.76
CCDC38Q502W7 RPL12P22-201ENST00000519073 490 ntBASIC4.04□□□□□ -1.76
CCDC38Q502W7 MRPL49P2-201ENST00000521066 465 ntBASIC4.04□□□□□ -1.76
CCDC38Q502W7 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.04□□□□□ -1.76
CCDC38Q502W7 DEFB108A-201ENST00000530110 222 ntBASIC4.04□□□□□ -1.76
CCDC38Q502W7 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC38Q502W7 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.04□□□□□ -1.76
CCDC38Q502W7 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC38Q502W7 AC136624.4-201ENST00000573044 370 ntBASIC4.04□□□□□ -1.76
CCDC38Q502W7 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC38Q502W7 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC38Q502W7 RSL24D1P11-201ENST00000591045 491 ntBASIC4.04□□□□□ -1.76
CCDC38Q502W7 AL592436.1-201ENST00000605135 558 ntBASIC4.04□□□□□ -1.76
CCDC38Q502W7 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC38Q502W7 AL391813.2-201ENST00000609113 322 ntBASIC4.04□□□□□ -1.76
CCDC38Q502W7 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
CCDC38Q502W7 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC38Q502W7 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC38Q502W7 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
CCDC38Q502W7 AC090582.1-201ENST00000636321 199 ntBASIC4.04□□□□□ -1.76
CCDC38Q502W7 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
CCDC38Q502W7 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
CCDC38Q502W7 RIOK3P1-201ENST00000418778 1528 ntBASIC4.04□□□□□ -1.76
CCDC38Q502W7 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC38Q502W7 AC138915.3-201ENST00000562908 1389 ntBASIC4.03□□□□□ -1.76
CCDC38Q502W7 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC38Q502W7 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.03□□□□□ -1.76
CCDC38Q502W7 CEP170P1-201ENST00000502249 4587 ntBASIC4.03□□□□□ -1.76
CCDC38Q502W7 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC38Q502W7 RNU5A-1-201ENST00000362698 116 ntBASIC4.03□□□□□ -1.76
CCDC38Q502W7 EI24P2-201ENST00000397776 1076 ntBASIC4.03□□□□□ -1.76
CCDC38Q502W7 RPS3AP3-201ENST00000411933 242 ntBASIC4.03□□□□□ -1.76
CCDC38Q502W7 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.03□□□□□ -1.76
CCDC38Q502W7 SPA17P1-201ENST00000416656 452 ntBASIC4.03□□□□□ -1.76
CCDC38Q502W7 AC108032.1-201ENST00000416706 207 ntBASIC4.03□□□□□ -1.76
CCDC38Q502W7 RPL17P36-201ENST00000420302 549 ntBASIC4.03□□□□□ -1.76
CCDC38Q502W7 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC38Q502W7 ARF4P2-201ENST00000430209 526 ntBASIC4.03□□□□□ -1.76
CCDC38Q502W7 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC38Q502W7 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC38Q502W7 RABEPKP1-201ENST00000440529 1026 ntBASIC4.03□□□□□ -1.76
CCDC38Q502W7 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC38Q502W7 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC38Q502W7 USP9YP29-201ENST00000445112 563 ntBASIC4.03□□□□□ -1.76
CCDC38Q502W7 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC38Q502W7 ELOCP30-201ENST00000447108 299 ntBASIC4.03□□□□□ -1.76
CCDC38Q502W7 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC38Q502W7 MTCO2P18-201ENST00000457151 658 ntBASIC4.03□□□□□ -1.76
CCDC38Q502W7 HSPE1P6-201ENST00000479457 291 ntBASIC4.03□□□□□ -1.76
CCDC38Q502W7 LARP1BP2-201ENST00000486594 519 ntBASIC4.03□□□□□ -1.76
CCDC38Q502W7 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC38Q502W7 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC38Q502W7 HMGB3P15-201ENST00000507326 574 ntBASIC4.03□□□□□ -1.76
CCDC38Q502W7 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC4.03□□□□□ -1.76
CCDC38Q502W7 AL359273.1-201ENST00000510918 627 ntBASIC4.03□□□□□ -1.76
CCDC38Q502W7 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
CCDC38Q502W7 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC38Q502W7 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.03□□□□□ -1.76
CCDC38Q502W7 AP003122.4-201ENST00000530980 758 ntBASIC4.03□□□□□ -1.76
CCDC38Q502W7 AP002453.2-201ENST00000533503 320 ntBASIC4.03□□□□□ -1.76
CCDC38Q502W7 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC38Q502W7 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
CCDC38Q502W7 SYF2P1-201ENST00000550658 413 ntBASIC4.03□□□□□ -1.76
CCDC38Q502W7 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC38Q502W7 MIR3118-1-201ENST00000581787 76 ntBASIC4.03□□□□□ -1.76
CCDC38Q502W7 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.03□□□□□ -1.76
CCDC38Q502W7 CKS1BP3-201ENST00000600888 237 ntBASIC4.03□□□□□ -1.76
CCDC38Q502W7 BRDTP1-201ENST00000605735 677 ntBASIC4.03□□□□□ -1.76
CCDC38Q502W7 AC245008.1-201ENST00000608123 476 ntBASIC4.03□□□□□ -1.76
CCDC38Q502W7 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC38Q502W7 AC103710.1-201ENST00000610003 901 ntBASIC4.03□□□□□ -1.76
CCDC38Q502W7 DLEU2_1.1-201ENST00000612089 120 ntBASIC4.03□□□□□ -1.76
CCDC38Q502W7 MIR6716-201ENST00000613413 80 ntBASIC4.03□□□□□ -1.76
CCDC38Q502W7 DLEU2_1.2-201ENST00000614667 120 ntBASIC4.03□□□□□ -1.76
CCDC38Q502W7 SDAD1P2-201ENST00000441308 2028 ntBASIC4.03□□□□□ -1.76
CCDC38Q502W7 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC38Q502W7 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.03□□□□□ -1.76
CCDC38Q502W7 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC38Q502W7 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC38Q502W7 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC38Q502W7 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC38Q502W7 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CCDC38Q502W7 SNORA36C-201ENST00000384289 132 ntBASIC4.02□□□□□ -1.77
CCDC38Q502W7 MRPL42P2-201ENST00000403169 426 ntBASIC4.02□□□□□ -1.77
CCDC38Q502W7 BTF3L4P1-201ENST00000413813 468 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms