Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC144BQ3MJ40 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC144BQ3MJ40 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
CCDC144BQ3MJ40 RNU5E-6P-201ENST00000365574 115 ntBASIC5.01□□□□□ -1.61
CCDC144BQ3MJ40 RHOT1P2-201ENST00000366423 333 ntBASIC5.01□□□□□ -1.61
CCDC144BQ3MJ40 AL359634.1-202ENST00000404721 284 ntBASIC5.01□□□□□ -1.61
CCDC144BQ3MJ40 CIR1P3-201ENST00000405137 479 ntBASIC5.01□□□□□ -1.61
CCDC144BQ3MJ40 SNORA11F-201ENST00000408237 128 ntBASIC5.01□□□□□ -1.61
CCDC144BQ3MJ40 RNU2-71P-201ENST00000411395 189 ntBASIC5.01□□□□□ -1.61
CCDC144BQ3MJ40 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC144BQ3MJ40 AC008850.1-201ENST00000427546 362 ntBASIC5.01□□□□□ -1.61
CCDC144BQ3MJ40 VDAC1P3-201ENST00000434069 851 ntBASIC5.01□□□□□ -1.61
CCDC144BQ3MJ40 RPS20P5-201ENST00000434808 360 ntBASIC5.01□□□□□ -1.61
CCDC144BQ3MJ40 RPL36AP6-201ENST00000435770 321 ntBASIC5.01□□□□□ -1.61
CCDC144BQ3MJ40 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC144BQ3MJ40 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC144BQ3MJ40 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC5.01□□□□□ -1.61
CCDC144BQ3MJ40 SNRPGP6-201ENST00000451124 220 ntBASIC5.01□□□□□ -1.61
CCDC144BQ3MJ40 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC144BQ3MJ40 CREM-226ENST00000469949 721 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC144BQ3MJ40 AC010631.1-201ENST00000474150 156 ntBASIC5.01□□□□□ -1.61
CCDC144BQ3MJ40 RN7SL432P-201ENST00000484057 298 ntBASIC5.01□□□□□ -1.61
CCDC144BQ3MJ40 NIPA2P2-201ENST00000496376 1083 ntBASIC5.01□□□□□ -1.61
CCDC144BQ3MJ40 AC009646.1-201ENST00000510455 318 ntBASIC5.01□□□□□ -1.61
CCDC144BQ3MJ40 AC011352.1-201ENST00000512300 793 ntBASIC5.01□□□□□ -1.61
CCDC144BQ3MJ40 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC144BQ3MJ40 RNA5SP154-201ENST00000516193 111 ntBASIC5.01□□□□□ -1.61
CCDC144BQ3MJ40 SNORA31.8-201ENST00000516327 108 ntBASIC5.01□□□□□ -1.61
CCDC144BQ3MJ40 SCARNA24.1-201ENST00000516465 137 ntBASIC5.01□□□□□ -1.61
CCDC144BQ3MJ40 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC144BQ3MJ40 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC144BQ3MJ40 AC008489.1-201ENST00000524271 483 ntBASIC5.01□□□□□ -1.61
CCDC144BQ3MJ40 PTS-202ENST00000524931 696 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC144BQ3MJ40 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC5.01□□□□□ -1.61
CCDC144BQ3MJ40 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC144BQ3MJ40 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC144BQ3MJ40 MIR3921-201ENST00000577308 85 ntBASIC5.01□□□□□ -1.61
CCDC144BQ3MJ40 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC144BQ3MJ40 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC144BQ3MJ40 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC144BQ3MJ40 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC144BQ3MJ40 AC008638.3-201ENST00000603341 463 ntBASIC5.01□□□□□ -1.61
CCDC144BQ3MJ40 RBM11P1-201ENST00000604951 799 ntBASIC5.01□□□□□ -1.61
CCDC144BQ3MJ40 AL138721.1-201ENST00000616756 179 ntBASIC5.01□□□□□ -1.61
CCDC144BQ3MJ40 MIR6891-201ENST00000618788 93 ntBASIC5.01□□□□□ -1.61
CCDC144BQ3MJ40 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC144BQ3MJ40 AL137003.2-201ENST00000606924 2538 ntBASIC5.01□□□□□ -1.61
CCDC144BQ3MJ40 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC144BQ3MJ40 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC144BQ3MJ40 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.01□□□□□ -1.61
CCDC144BQ3MJ40 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC144BQ3MJ40 AL158163.1-201ENST00000603915 1649 ntBASIC5.01□□□□□ -1.61
CCDC144BQ3MJ40 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC144BQ3MJ40 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC144BQ3MJ40 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC5.01□□□□□ -1.61
CCDC144BQ3MJ40 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCDC144BQ3MJ40 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCDC144BQ3MJ40 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
CCDC144BQ3MJ40 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CCDC144BQ3MJ40 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5□□□□□ -1.61
CCDC144BQ3MJ40 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5□□□□□ -1.61
CCDC144BQ3MJ40 RNU6-600P-201ENST00000362524 99 ntBASIC5□□□□□ -1.61
CCDC144BQ3MJ40 RNU5A-1-201ENST00000362698 116 ntBASIC5□□□□□ -1.61
CCDC144BQ3MJ40 RNU6-960P-201ENST00000364056 120 ntBASIC5□□□□□ -1.61
CCDC144BQ3MJ40 RN7SKP280-201ENST00000364196 304 ntBASIC5□□□□□ -1.61
CCDC144BQ3MJ40 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CCDC144BQ3MJ40 MIR3065-201ENST00000390137 79 ntBASIC5□□□□□ -1.61
CCDC144BQ3MJ40 MIR1290-201ENST00000408735 78 ntBASIC5□□□□□ -1.61
CCDC144BQ3MJ40 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC5□□□□□ -1.61
CCDC144BQ3MJ40 RAC1P6-201ENST00000423911 575 ntBASIC5□□□□□ -1.61
CCDC144BQ3MJ40 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC5□□□□□ -1.61
CCDC144BQ3MJ40 RPL7L1P10-201ENST00000427790 463 ntBASIC5□□□□□ -1.61
CCDC144BQ3MJ40 CYCSP43-201ENST00000438233 310 ntBASIC5□□□□□ -1.61
CCDC144BQ3MJ40 RPL23AP52-201ENST00000439311 478 ntBASIC5□□□□□ -1.61
CCDC144BQ3MJ40 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC5□□□□□ -1.61
CCDC144BQ3MJ40 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5□□□□□ -1.61
CCDC144BQ3MJ40 MTND2P24-201ENST00000453434 806 ntBASIC5□□□□□ -1.61
CCDC144BQ3MJ40 RPL38P1-201ENST00000460914 211 ntBASIC5□□□□□ -1.61
CCDC144BQ3MJ40 RPL21P104-201ENST00000464143 478 ntBASIC5□□□□□ -1.61
CCDC144BQ3MJ40 HSPE1P6-201ENST00000479457 291 ntBASIC5□□□□□ -1.61
CCDC144BQ3MJ40 AC019235.1-201ENST00000503847 207 ntBASIC5□□□□□ -1.61
CCDC144BQ3MJ40 AC010342.1-201ENST00000514047 877 ntBASIC5□□□□□ -1.61
CCDC144BQ3MJ40 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC5□□□□□ -1.61
CCDC144BQ3MJ40 RNU6-1178P-201ENST00000516674 107 ntBASIC5□□□□□ -1.61
CCDC144BQ3MJ40 HMGB1P41-201ENST00000520234 440 ntBASIC5□□□□□ -1.61
CCDC144BQ3MJ40 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC5□□□□□ -1.61
CCDC144BQ3MJ40 ARL2BPP2-201ENST00000550907 489 ntBASIC5□□□□□ -1.61
CCDC144BQ3MJ40 HMGB1P33-201ENST00000563485 527 ntBASIC5□□□□□ -1.61
CCDC144BQ3MJ40 AC034105.4-201ENST00000568304 277 ntBASIC5□□□□□ -1.61
CCDC144BQ3MJ40 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC5□□□□□ -1.61
CCDC144BQ3MJ40 BPIFA4P-203ENST00000603168 689 ntBASIC5□□□□□ -1.61
CCDC144BQ3MJ40 AC079587.1-201ENST00000603846 277 ntBASIC5□□□□□ -1.61
CCDC144BQ3MJ40 AL391646.1-201ENST00000603860 190 ntBASIC5□□□□□ -1.61
CCDC144BQ3MJ40 AP001330.4-201ENST00000604350 154 ntBASIC5□□□□□ -1.61
CCDC144BQ3MJ40 Z84480.1-201ENST00000605131 311 ntBASIC5□□□□□ -1.61
CCDC144BQ3MJ40 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC5□□□□□ -1.61
CCDC144BQ3MJ40 AP002826.1-201ENST00000608835 315 ntBASIC5□□□□□ -1.61
CCDC144BQ3MJ40 AL031666.3-201ENST00000609320 1006 ntBASIC5□□□□□ -1.61
CCDC144BQ3MJ40 AC010133.1-201ENST00000615809 842 ntBASIC5□□□□□ -1.61
CCDC144BQ3MJ40 AC139792.3-201ENST00000623525 224 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms