Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AC027673.1-201ENST00000456245 405 ntBASIC1.06□□□□□ -2.24
HSPG2P98160 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC1.06□□□□□ -2.24
HSPG2P98160 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC1.06□□□□□ -2.24
HSPG2P98160 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.06□□□□□ -2.24
HSPG2P98160 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
HSPG2P98160 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC1.06□□□□□ -2.24
HSPG2P98160 AC010678.1-201ENST00000614118 713 ntBASIC1.06□□□□□ -2.24
HSPG2P98160 AC098679.5-201ENST00000624394 571 ntBASIC1.06□□□□□ -2.24
HSPG2P98160 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
HSPG2P98160 Y_RNA.251-201ENST00000364551 99 ntBASIC1.05□□□□□ -2.24
HSPG2P98160 MTND1P18-201ENST00000448191 573 ntBASIC1.05□□□□□ -2.24
HSPG2P98160 PTGES3P5-201ENST00000455109 434 ntBASIC1.05□□□□□ -2.24
HSPG2P98160 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
HSPG2P98160 GTF2IP9-201ENST00000502460 301 ntBASIC1.05□□□□□ -2.24
HSPG2P98160 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC1.05□□□□□ -2.24
HSPG2P98160 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.05□□□□□ -2.24
HSPG2P98160 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC1.05□□□□□ -2.24
HSPG2P98160 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.05□□□□□ -2.24
HSPG2P98160 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC1.05□□□□□ -2.24
HSPG2P98160 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
HSPG2P98160 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC1.05□□□□□ -2.24
HSPG2P98160 RNY1P4-201ENST00000384595 115 ntBASIC1.05□□□□□ -2.24
HSPG2P98160 STAT4-203ENST00000409995 709 ntTSL 5 BASIC1.05□□□□□ -2.24
HSPG2P98160 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC1.05□□□□□ -2.24
HSPG2P98160 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.05□□□□□ -2.24
HSPG2P98160 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
HSPG2P98160 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
HSPG2P98160 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
HSPG2P98160 RNU6-1105P-201ENST00000384774 107 ntBASIC1.05□□□□□ -2.24
HSPG2P98160 TRIM60P13-201ENST00000432350 1283 ntBASIC1.05□□□□□ -2.24
HSPG2P98160 AC017099.1-201ENST00000448261 1028 ntBASIC1.05□□□□□ -2.24
HSPG2P98160 RPL23AP7-203ENST00000449021 469 ntBASIC1.05□□□□□ -2.24
HSPG2P98160 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.05□□□□□ -2.24
HSPG2P98160 TBCAP3-201ENST00000512475 312 ntBASIC1.05□□□□□ -2.24
HSPG2P98160 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC1.05□□□□□ -2.24
HSPG2P98160 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC1.05□□□□□ -2.24
HSPG2P98160 RNU1-42P-201ENST00000364033 160 ntBASIC1.05□□□□□ -2.24
HSPG2P98160 AC007390.1-201ENST00000415722 356 ntBASIC1.05□□□□□ -2.24
HSPG2P98160 HMGN2P38-201ENST00000423806 265 ntBASIC1.05□□□□□ -2.24
HSPG2P98160 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.05□□□□□ -2.24
HSPG2P98160 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC1.05□□□□□ -2.24
HSPG2P98160 AL157834.3-201ENST00000615543 103 ntBASIC1.05□□□□□ -2.24
HSPG2P98160 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.05□□□□□ -2.24
HSPG2P98160 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
HSPG2P98160 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.04□□□□□ -2.24
HSPG2P98160 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
HSPG2P98160 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
HSPG2P98160 AL121972.1-201ENST00000402023 252 ntBASIC1.04□□□□□ -2.24
HSPG2P98160 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC1.04□□□□□ -2.24
HSPG2P98160 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC1.04□□□□□ -2.24
HSPG2P98160 AC244033.1-201ENST00000426826 870 ntBASIC1.04□□□□□ -2.24
HSPG2P98160 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC1.04□□□□□ -2.24
HSPG2P98160 AL365400.1-201ENST00000431854 640 ntBASIC1.04□□□□□ -2.24
HSPG2P98160 XKRY2-201ENST00000442362 1093 ntBASIC1.04□□□□□ -2.24
HSPG2P98160 AL590664.1-201ENST00000448065 339 ntBASIC1.04□□□□□ -2.24
HSPG2P98160 HMGB1P26-201ENST00000452520 628 ntBASIC1.04□□□□□ -2.24
HSPG2P98160 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.04□□□□□ -2.24
HSPG2P98160 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
HSPG2P98160 AC022790.1-201ENST00000522872 204 ntBASIC1.04□□□□□ -2.24
HSPG2P98160 MTND5P21-201ENST00000531961 522 ntBASIC1.04□□□□□ -2.24
HSPG2P98160 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC1.04□□□□□ -2.24
HSPG2P98160 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC1.04□□□□□ -2.24
HSPG2P98160 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
HSPG2P98160 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
HSPG2P98160 METTL21EP-201ENST00000298105 713 ntBASIC1.04□□□□□ -2.24
HSPG2P98160 RNA5SP27-201ENST00000363839 119 ntBASIC1.04□□□□□ -2.24
HSPG2P98160 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
HSPG2P98160 Y_RNA.393-201ENST00000383936 102 ntBASIC1.04□□□□□ -2.24
HSPG2P98160 MTND5P7-201ENST00000413558 1798 ntBASIC1.04□□□□□ -2.24
HSPG2P98160 SEPT7P7-201ENST00000420492 1301 ntBASIC1.04□□□□□ -2.24
HSPG2P98160 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC1.04□□□□□ -2.24
HSPG2P98160 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.04□□□□□ -2.24
HSPG2P98160 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC1.04□□□□□ -2.24
HSPG2P98160 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.04□□□□□ -2.24
HSPG2P98160 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC1.04□□□□□ -2.24
HSPG2P98160 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC1.04□□□□□ -2.24
HSPG2P98160 AL031274.2-201ENST00000599419 203 ntBASIC1.04□□□□□ -2.24
HSPG2P98160 AC243773.3-201ENST00000613270 256 ntBASIC1.04□□□□□ -2.24
HSPG2P98160 CDC27P3-201ENST00000635418 1910 ntBASIC1.04□□□□□ -2.24
HSPG2P98160 AC090255.1-201ENST00000495779 349 ntBASIC1.04□□□□□ -2.24
HSPG2P98160 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC1.04□□□□□ -2.24
HSPG2P98160 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
HSPG2P98160 AC012321.1-201ENST00000561622 1588 ntBASIC1.04□□□□□ -2.24
HSPG2P98160 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
HSPG2P98160 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC1.03□□□□□ -2.24
HSPG2P98160 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.24
HSPG2P98160 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.24
HSPG2P98160 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC1.03□□□□□ -2.24
HSPG2P98160 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.03□□□□□ -2.24
HSPG2P98160 AC025033.1-201ENST00000463883 194 ntBASIC1.03□□□□□ -2.24
HSPG2P98160 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.03□□□□□ -2.24
HSPG2P98160 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC1.03□□□□□ -2.24
HSPG2P98160 MIR98-201ENST00000606724 119 ntBASIC1.03□□□□□ -2.24
HSPG2P98160 RNU6-1032P-201ENST00000384100 107 ntBASIC1.03□□□□□ -2.24
HSPG2P98160 XKRYP4-201ENST00000414395 483 ntBASIC1.03□□□□□ -2.24
HSPG2P98160 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.03□□□□□ -2.24
HSPG2P98160 UBE2V1P6-201ENST00000430840 422 ntBASIC1.03□□□□□ -2.24
HSPG2P98160 AL138799.3-201ENST00000438968 350 ntBASIC1.03□□□□□ -2.24
HSPG2P98160 XKRYP5-201ENST00000449659 483 ntBASIC1.03□□□□□ -2.24
HSPG2P98160 RPS29P29-201ENST00000456396 171 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms