Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.39□□□□□ -2.19
RPS28P62857 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC1.39□□□□□ -2.19
RPS28P62857 AP000403.1-201ENST00000603349 851 ntBASIC1.39□□□□□ -2.19
RPS28P62857 CR589904.2-201ENST00000612533 440 ntBASIC1.39□□□□□ -2.19
RPS28P62857 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC1.39□□□□□ -2.19
RPS28P62857 PISRT1-201ENST00000626175 531 ntBASIC1.39□□□□□ -2.19
RPS28P62857 MTND5P30-201ENST00000452896 1731 ntBASIC1.39□□□□□ -2.19
RPS28P62857 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.39□□□□□ -2.19
RPS28P62857 ZNF833P-201ENST00000424938 1494 ntBASIC1.38□□□□□ -2.19
RPS28P62857 MTND5P1-201ENST00000445440 1375 ntBASIC1.38□□□□□ -2.19
RPS28P62857 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
RPS28P62857 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC1.38□□□□□ -2.19
RPS28P62857 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC1.38□□□□□ -2.19
RPS28P62857 U3.13-201ENST00000364804 214 ntBASIC1.38□□□□□ -2.19
RPS28P62857 RNU6-741P-201ENST00000383889 107 ntBASIC1.38□□□□□ -2.19
RPS28P62857 SNORA41-201ENST00000384675 132 ntBASIC1.38□□□□□ -2.19
RPS28P62857 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
RPS28P62857 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
RPS28P62857 RPL23AP59-201ENST00000399415 461 ntBASIC1.38□□□□□ -2.19
RPS28P62857 UBE2V1P11-201ENST00000411559 285 ntBASIC1.38□□□□□ -2.19
RPS28P62857 RPL7P8-201ENST00000411964 730 ntBASIC1.38□□□□□ -2.19
RPS28P62857 OR9R1P-201ENST00000412200 877 ntBASIC1.38□□□□□ -2.19
RPS28P62857 BX276092.3-201ENST00000424182 230 ntBASIC1.38□□□□□ -2.19
RPS28P62857 MTCO2P17-201ENST00000424336 677 ntBASIC1.38□□□□□ -2.19
RPS28P62857 ZNF863P-201ENST00000426746 417 ntBASIC1.38□□□□□ -2.19
RPS28P62857 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC1.38□□□□□ -2.19
RPS28P62857 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC1.38□□□□□ -2.19
RPS28P62857 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC1.38□□□□□ -2.19
RPS28P62857 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.38□□□□□ -2.19
RPS28P62857 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC1.38□□□□□ -2.19
RPS28P62857 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC1.38□□□□□ -2.19
RPS28P62857 AL021397.1-201ENST00000451806 248 ntBASIC1.38□□□□□ -2.19
RPS28P62857 CACYBPP2-201ENST00000453625 678 ntBASIC1.38□□□□□ -2.19
RPS28P62857 RPL35AP28-201ENST00000459730 331 ntBASIC1.38□□□□□ -2.19
RPS28P62857 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.38□□□□□ -2.19
RPS28P62857 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
RPS28P62857 AC011005.3-201ENST00000491624 395 ntBASIC1.38□□□□□ -2.19
RPS28P62857 OR9N1P-202ENST00000494289 481 ntBASIC1.38□□□□□ -2.19
RPS28P62857 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC1.38□□□□□ -2.19
RPS28P62857 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC1.38□□□□□ -2.19
RPS28P62857 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC1.38□□□□□ -2.19
RPS28P62857 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC1.38□□□□□ -2.19
RPS28P62857 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
RPS28P62857 AC022483.1-201ENST00000514020 567 ntBASIC1.38□□□□□ -2.19
RPS28P62857 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC1.38□□□□□ -2.19
RPS28P62857 RN7SKP132-201ENST00000516001 208 ntBASIC1.38□□□□□ -2.19
RPS28P62857 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
RPS28P62857 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC1.38□□□□□ -2.19
RPS28P62857 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC1.38□□□□□ -2.19
RPS28P62857 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC1.38□□□□□ -2.19
RPS28P62857 AC091042.1-201ENST00000579213 173 ntBASIC1.38□□□□□ -2.19
RPS28P62857 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.38□□□□□ -2.19
RPS28P62857 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC1.38□□□□□ -2.19
RPS28P62857 AC126118.1-201ENST00000607744 628 ntBASIC1.38□□□□□ -2.19
RPS28P62857 MIR7851-201ENST00000610611 160 ntBASIC1.38□□□□□ -2.19
RPS28P62857 AC020658.4-201ENST00000613987 684 ntBASIC1.38□□□□□ -2.19
RPS28P62857 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC1.38□□□□□ -2.19
RPS28P62857 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.38□□□□□ -2.19
RPS28P62857 DLD-214ENST00000639772 421 ntTSL 5 BASIC1.38□□□□□ -2.19
RPS28P62857 AC005832.2-201ENST00000538921 1430 ntBASIC1.38□□□□□ -2.19
RPS28P62857 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.38□□□□□ -2.19
RPS28P62857 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.38□□□□□ -2.19
RPS28P62857 AC010889.1-201ENST00000566193 2666 ntBASIC1.37□□□□□ -2.19
RPS28P62857 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.37□□□□□ -2.19
RPS28P62857 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.37□□□□□ -2.19
RPS28P62857 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
RPS28P62857 Y_RNA.209-201ENST00000364156 111 ntBASIC1.37□□□□□ -2.19
RPS28P62857 SNORD113.2-201ENST00000364166 89 ntBASIC1.37□□□□□ -2.19
RPS28P62857 SNORA9.2-201ENST00000365361 133 ntBASIC1.37□□□□□ -2.19
RPS28P62857 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.37□□□□□ -2.19
RPS28P62857 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC1.37□□□□□ -2.19
RPS28P62857 RNU6-997P-201ENST00000384725 107 ntBASIC1.37□□□□□ -2.19
RPS28P62857 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
RPS28P62857 HMGN2P39-201ENST00000398005 273 ntBASIC1.37□□□□□ -2.19
RPS28P62857 SNORA11B-201ENST00000408175 129 ntBASIC1.37□□□□□ -2.19
RPS28P62857 RNU2-63P-201ENST00000410792 194 ntBASIC1.37□□□□□ -2.19
RPS28P62857 RNA5SP450-201ENST00000411206 102 ntBASIC1.37□□□□□ -2.19
RPS28P62857 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC1.37□□□□□ -2.19
RPS28P62857 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC1.37□□□□□ -2.19
RPS28P62857 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.37□□□□□ -2.19
RPS28P62857 AC007389.2-201ENST00000434630 306 ntBASIC1.37□□□□□ -2.19
RPS28P62857 CEACAMP7-201ENST00000444105 496 ntBASIC1.37□□□□□ -2.19
RPS28P62857 RAD1P2-201ENST00000446414 663 ntBASIC1.37□□□□□ -2.19
RPS28P62857 RPL7P12-201ENST00000446719 750 ntBASIC1.37□□□□□ -2.19
RPS28P62857 RPL23AP7-203ENST00000449021 469 ntBASIC1.37□□□□□ -2.19
RPS28P62857 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC1.37□□□□□ -2.19
RPS28P62857 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.37□□□□□ -2.19
RPS28P62857 RN7SL293P-201ENST00000481765 281 ntBASIC1.37□□□□□ -2.19
RPS28P62857 RN7SL170P-201ENST00000487098 295 ntBASIC1.37□□□□□ -2.19
RPS28P62857 RPS29P20-201ENST00000489592 171 ntBASIC1.37□□□□□ -2.19
RPS28P62857 AC096745.1-201ENST00000509945 370 ntBASIC1.37□□□□□ -2.19
RPS28P62857 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC1.37□□□□□ -2.19
RPS28P62857 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC1.37□□□□□ -2.19
RPS28P62857 AC100870.1-201ENST00000522035 505 ntBASIC1.37□□□□□ -2.19
RPS28P62857 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.37□□□□□ -2.19
RPS28P62857 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC1.37□□□□□ -2.19
RPS28P62857 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC1.37□□□□□ -2.19
RPS28P62857 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC1.37□□□□□ -2.19
RPS28P62857 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC1.37□□□□□ -2.19
RPS28P62857 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms