Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HDAC4P56524 AC010733.2-201ENST00000589496 5702 ntBASIC3.88□□□□□ -1.79
HDAC4P56524 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HDAC4P56524 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.87□□□□□ -1.79
HDAC4P56524 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HDAC4P56524 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HDAC4P56524 RIOK3P1-201ENST00000418778 1528 ntBASIC3.87□□□□□ -1.79
HDAC4P56524 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
HDAC4P56524 SNORA63.1-201ENST00000362493 131 ntBASIC3.87□□□□□ -1.79
HDAC4P56524 RNU5F-7P-201ENST00000363696 115 ntBASIC3.87□□□□□ -1.79
HDAC4P56524 Y_RNA.234-201ENST00000364409 97 ntBASIC3.87□□□□□ -1.79
HDAC4P56524 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.87□□□□□ -1.79
HDAC4P56524 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HDAC4P56524 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.87□□□□□ -1.79
HDAC4P56524 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.87□□□□□ -1.79
HDAC4P56524 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
HDAC4P56524 U8.11-201ENST00000384699 133 ntBASIC3.87□□□□□ -1.79
HDAC4P56524 U8.12-201ENST00000384701 133 ntBASIC3.87□□□□□ -1.79
HDAC4P56524 U8.14-201ENST00000390843 143 ntBASIC3.87□□□□□ -1.79
HDAC4P56524 DEFB108C-201ENST00000400154 252 ntBASIC3.87□□□□□ -1.79
HDAC4P56524 RPS7P13-201ENST00000413955 498 ntBASIC3.87□□□□□ -1.79
HDAC4P56524 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
HDAC4P56524 AC245052.5-201ENST00000416320 649 ntBASIC3.87□□□□□ -1.79
HDAC4P56524 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.87□□□□□ -1.79
HDAC4P56524 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.87□□□□□ -1.79
HDAC4P56524 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.87□□□□□ -1.79
HDAC4P56524 SETP5-201ENST00000437270 562 ntBASIC3.87□□□□□ -1.79
HDAC4P56524 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.87□□□□□ -1.79
HDAC4P56524 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.87□□□□□ -1.79
HDAC4P56524 AL592447.1-201ENST00000447592 540 ntBASIC3.87□□□□□ -1.79
HDAC4P56524 OR6K1P-201ENST00000456766 971 ntBASIC3.87□□□□□ -1.79
HDAC4P56524 RNU6-956P-201ENST00000458868 103 ntBASIC3.87□□□□□ -1.79
HDAC4P56524 U8.18-201ENST00000459285 133 ntBASIC3.87□□□□□ -1.79
HDAC4P56524 RPL21P104-201ENST00000464143 478 ntBASIC3.87□□□□□ -1.79
HDAC4P56524 AP000797.1-201ENST00000478870 387 ntBASIC3.87□□□□□ -1.79
HDAC4P56524 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.87□□□□□ -1.79
HDAC4P56524 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.87□□□□□ -1.79
HDAC4P56524 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.87□□□□□ -1.79
HDAC4P56524 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.87□□□□□ -1.79
HDAC4P56524 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.87□□□□□ -1.79
HDAC4P56524 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.87□□□□□ -1.79
HDAC4P56524 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.87□□□□□ -1.79
HDAC4P56524 AC008011.1-201ENST00000545989 227 ntBASIC3.87□□□□□ -1.79
HDAC4P56524 AGGF1P4-201ENST00000568249 801 ntBASIC3.87□□□□□ -1.79
HDAC4P56524 AC012213.3-201ENST00000577199 777 ntBASIC3.87□□□□□ -1.79
HDAC4P56524 MIR5187-201ENST00000583479 76 ntBASIC3.87□□□□□ -1.79
HDAC4P56524 SNORD84-203ENST00000584275 78 ntBASIC3.87□□□□□ -1.79
HDAC4P56524 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.87□□□□□ -1.79
HDAC4P56524 XIAPP1-201ENST00000603162 600 ntBASIC3.87□□□□□ -1.79
HDAC4P56524 PRELID3BP8-201ENST00000604148 295 ntBASIC3.87□□□□□ -1.79
HDAC4P56524 AL161756.2-201ENST00000604597 246 ntBASIC3.87□□□□□ -1.79
HDAC4P56524 AC068276.1-201ENST00000605793 379 ntBASIC3.87□□□□□ -1.79
HDAC4P56524 AC087752.4-201ENST00000605911 462 ntBASIC3.87□□□□□ -1.79
HDAC4P56524 AC090425.2-201ENST00000608818 501 ntBASIC3.87□□□□□ -1.79
HDAC4P56524 AC027807.2-201ENST00000616099 408 ntBASIC3.87□□□□□ -1.79
HDAC4P56524 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC3.87□□□□□ -1.79
HDAC4P56524 AC098679.4-201ENST00000624241 654 ntBASIC3.87□□□□□ -1.79
HDAC4P56524 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.87□□□□□ -1.79
HDAC4P56524 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
HDAC4P56524 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
HDAC4P56524 AC006504.1-201ENST00000562493 3666 ntBASIC3.87□□□□□ -1.79
HDAC4P56524 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.87□□□□□ -1.79
HDAC4P56524 AC092447.10-201ENST00000620607 1652 ntBASIC3.87□□□□□ -1.79
HDAC4P56524 AC092326.2-201ENST00000624772 1561 ntBASIC3.86□□□□□ -1.79
HDAC4P56524 RNY3P10-201ENST00000384764 102 ntBASIC3.86□□□□□ -1.79
HDAC4P56524 RNU6-712P-201ENST00000410558 100 ntBASIC3.86□□□□□ -1.79
HDAC4P56524 RNU2-71P-201ENST00000411395 189 ntBASIC3.86□□□□□ -1.79
HDAC4P56524 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HDAC4P56524 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.86□□□□□ -1.79
HDAC4P56524 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.86□□□□□ -1.79
HDAC4P56524 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.86□□□□□ -1.79
HDAC4P56524 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.86□□□□□ -1.79
HDAC4P56524 AC091862.1-201ENST00000438016 1100 ntBASIC3.86□□□□□ -1.79
HDAC4P56524 CYCSP43-201ENST00000438233 310 ntBASIC3.86□□□□□ -1.79
HDAC4P56524 TXNP1-201ENST00000441872 371 ntBASIC3.86□□□□□ -1.79
HDAC4P56524 RPS24P6-201ENST00000452670 400 ntBASIC3.86□□□□□ -1.79
HDAC4P56524 RNA5SP269-201ENST00000459032 137 ntBASIC3.86□□□□□ -1.79
HDAC4P56524 VN1R17P-201ENST00000472048 1090 ntBASIC3.86□□□□□ -1.79
HDAC4P56524 HMGB1P22-201ENST00000505315 124 ntBASIC3.86□□□□□ -1.79
HDAC4P56524 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.86□□□□□ -1.79
HDAC4P56524 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.86□□□□□ -1.79
HDAC4P56524 AC025881.1-201ENST00000518851 512 ntBASIC3.86□□□□□ -1.79
HDAC4P56524 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.86□□□□□ -1.79
HDAC4P56524 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.86□□□□□ -1.79
HDAC4P56524 AP002748.2-201ENST00000528671 348 ntBASIC3.86□□□□□ -1.79
HDAC4P56524 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.86□□□□□ -1.79
HDAC4P56524 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.86□□□□□ -1.79
HDAC4P56524 MIR5697-201ENST00000578045 78 ntBASIC3.86□□□□□ -1.79
HDAC4P56524 AC083760.1-201ENST00000589621 670 ntBASIC3.86□□□□□ -1.79
HDAC4P56524 AC004853.1-201ENST00000604902 698 ntBASIC3.86□□□□□ -1.79
HDAC4P56524 AC010678.1-201ENST00000614118 713 ntBASIC3.86□□□□□ -1.79
HDAC4P56524 CRYM-AS1-204ENST00000637983 556 ntBASIC3.86□□□□□ -1.79
HDAC4P56524 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
HDAC4P56524 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
HDAC4P56524 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HDAC4P56524 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
HDAC4P56524 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
HDAC4P56524 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.86□□□□□ -1.79
HDAC4P56524 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.85□□□□□ -1.79
HDAC4P56524 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms