Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 RNU7-152P-201ENST00000458982 64 ntBASIC4.51□□□□□ -1.69
GFRA1P56159 RPL37P6-201ENST00000460682 294 ntBASIC4.51□□□□□ -1.69
GFRA1P56159 RPS3AP41-201ENST00000462701 778 ntBASIC4.51□□□□□ -1.69
GFRA1P56159 RPL23AP2-201ENST00000471227 466 ntBASIC4.51□□□□□ -1.69
GFRA1P56159 MLLT10P2-201ENST00000506434 249 ntBASIC4.51□□□□□ -1.69
GFRA1P56159 AC008526.1-201ENST00000509149 338 ntBASIC4.51□□□□□ -1.69
GFRA1P56159 AC104136.1-201ENST00000512969 394 ntBASIC4.51□□□□□ -1.69
GFRA1P56159 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.51□□□□□ -1.69
GFRA1P56159 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC4.51□□□□□ -1.69
GFRA1P56159 APOOP3-201ENST00000536787 586 ntBASIC4.51□□□□□ -1.69
GFRA1P56159 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.51□□□□□ -1.69
GFRA1P56159 EDDM3DP-201ENST00000554692 434 ntBASIC4.51□□□□□ -1.69
GFRA1P56159 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.51□□□□□ -1.69
GFRA1P56159 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.51□□□□□ -1.69
GFRA1P56159 MTCO3P23-201ENST00000561363 289 ntBASIC4.51□□□□□ -1.69
GFRA1P56159 AC005951.2-201ENST00000576282 495 ntBASIC4.51□□□□□ -1.69
GFRA1P56159 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC4.51□□□□□ -1.69
GFRA1P56159 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.51□□□□□ -1.69
GFRA1P56159 AC006504.6-201ENST00000590142 199 ntBASIC4.51□□□□□ -1.69
GFRA1P56159 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.51□□□□□ -1.69
GFRA1P56159 CYP2C61P-201ENST00000604072 290 ntBASIC4.51□□□□□ -1.69
GFRA1P56159 AL080274.1-201ENST00000605565 220 ntBASIC4.51□□□□□ -1.69
GFRA1P56159 AC124303.1-201ENST00000605703 360 ntBASIC4.51□□□□□ -1.69
GFRA1P56159 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
GFRA1P56159 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.51□□□□□ -1.69
GFRA1P56159 AC025031.4-201ENST00000621248 3271 ntBASIC4.51□□□□□ -1.69
GFRA1P56159 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
GFRA1P56159 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
GFRA1P56159 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
GFRA1P56159 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
GFRA1P56159 AC004925.1-201ENST00000624256 2706 ntBASIC4.51□□□□□ -1.69
GFRA1P56159 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
GFRA1P56159 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
GFRA1P56159 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
GFRA1P56159 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.5□□□□□ -1.69
GFRA1P56159 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.5□□□□□ -1.69
GFRA1P56159 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
GFRA1P56159 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
GFRA1P56159 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
GFRA1P56159 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.5□□□□□ -1.69
GFRA1P56159 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
GFRA1P56159 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
GFRA1P56159 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.5□□□□□ -1.69
GFRA1P56159 RNU5A-1-201ENST00000362698 116 ntBASIC4.5□□□□□ -1.69
GFRA1P56159 Y_RNA.146-201ENST00000363549 102 ntBASIC4.5□□□□□ -1.69
GFRA1P56159 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
GFRA1P56159 Y_RNA.445-201ENST00000384168 102 ntBASIC4.5□□□□□ -1.69
GFRA1P56159 SNORA36C-201ENST00000384289 132 ntBASIC4.5□□□□□ -1.69
GFRA1P56159 AL121834.1-202ENST00000404494 277 ntBASIC4.5□□□□□ -1.69
GFRA1P56159 COX6B1P1-201ENST00000415962 213 ntBASIC4.5□□□□□ -1.69
GFRA1P56159 AF186996.5-201ENST00000418098 904 ntBASIC4.5□□□□□ -1.69
GFRA1P56159 AC244098.2-201ENST00000422068 99 ntBASIC4.5□□□□□ -1.69
GFRA1P56159 AL669831.1-202ENST00000428504 417 ntBASIC4.5□□□□□ -1.69
GFRA1P56159 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.5□□□□□ -1.69
GFRA1P56159 RPL23AP69-201ENST00000431134 458 ntBASIC4.5□□□□□ -1.69
GFRA1P56159 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.5□□□□□ -1.69
GFRA1P56159 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC4.5□□□□□ -1.69
GFRA1P56159 RPL7AP61-201ENST00000443410 636 ntBASIC4.5□□□□□ -1.69
GFRA1P56159 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.5□□□□□ -1.69
GFRA1P56159 PRDX3P3-201ENST00000447765 522 ntBASIC4.5□□□□□ -1.69
GFRA1P56159 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.5□□□□□ -1.69
GFRA1P56159 AC090096.1-201ENST00000489168 390 ntBASIC4.5□□□□□ -1.69
GFRA1P56159 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.5□□□□□ -1.69
GFRA1P56159 RANP9-201ENST00000519957 271 ntBASIC4.5□□□□□ -1.69
GFRA1P56159 AC021006.3-201ENST00000530771 192 ntBASIC4.5□□□□□ -1.69
GFRA1P56159 DYNLL1P4-201ENST00000549314 266 ntBASIC4.5□□□□□ -1.69
GFRA1P56159 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.5□□□□□ -1.69
GFRA1P56159 AC006270.2-201ENST00000578523 652 ntBASIC4.5□□□□□ -1.69
GFRA1P56159 MIR3934-201ENST00000579806 107 ntBASIC4.5□□□□□ -1.69
GFRA1P56159 MIR5690-201ENST00000583739 73 ntBASIC4.5□□□□□ -1.69
GFRA1P56159 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.5□□□□□ -1.69
GFRA1P56159 AC020910.3-201ENST00000603701 874 ntBASIC4.5□□□□□ -1.69
GFRA1P56159 AL670379.10-201ENST00000604330 253 ntBASIC4.5□□□□□ -1.69
GFRA1P56159 AL670379.9-201ENST00000605428 253 ntBASIC4.5□□□□□ -1.69
GFRA1P56159 Mico1.1-201ENST00000611698 204 ntBASIC4.5□□□□□ -1.69
GFRA1P56159 AL138726.1-201ENST00000614873 333 ntBASIC4.5□□□□□ -1.69
GFRA1P56159 AC022418.1-201ENST00000624118 445 ntBASIC4.5□□□□□ -1.69
GFRA1P56159 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
GFRA1P56159 HSPA8P4-201ENST00000511877 1920 ntBASIC4.5□□□□□ -1.69
GFRA1P56159 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
GFRA1P56159 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
GFRA1P56159 ZNF519P1-201ENST00000449011 1626 ntBASIC4.5□□□□□ -1.69
GFRA1P56159 PCAT14-202ENST00000627127 3935 ntBASIC4.5□□□□□ -1.69
GFRA1P56159 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
GFRA1P56159 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
GFRA1P56159 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.49□□□□□ -1.69
GFRA1P56159 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.49□□□□□ -1.69
GFRA1P56159 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC4.49□□□□□ -1.69
GFRA1P56159 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
GFRA1P56159 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
GFRA1P56159 Y_RNA.135-201ENST00000363439 95 ntBASIC4.49□□□□□ -1.69
GFRA1P56159 Y_RNA.202-201ENST00000364083 110 ntBASIC4.49□□□□□ -1.69
GFRA1P56159 RNU6-128P-201ENST00000383976 107 ntBASIC4.49□□□□□ -1.69
GFRA1P56159 Y_RNA.422-201ENST00000384054 114 ntBASIC4.49□□□□□ -1.69
GFRA1P56159 Y_RNA.482-201ENST00000384377 111 ntBASIC4.49□□□□□ -1.69
GFRA1P56159 SNORA70.10-201ENST00000384515 134 ntBASIC4.49□□□□□ -1.69
GFRA1P56159 AL590704.1-201ENST00000402856 794 ntBASIC4.49□□□□□ -1.69
GFRA1P56159 RPL5P18-201ENST00000406671 891 ntBASIC4.49□□□□□ -1.69
GFRA1P56159 RNU6-1304P-201ENST00000411374 106 ntBASIC4.49□□□□□ -1.69
GFRA1P56159 RPS12P24-201ENST00000412619 387 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms