Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 HMGB1P25-201ENST00000468402 607 ntBASIC4.99□□□□□ -1.61
PMS1P54277 NIP7P2-201ENST00000485801 544 ntBASIC4.99□□□□□ -1.61
PMS1P54277 MTCO1P29-201ENST00000496868 288 ntBASIC4.99□□□□□ -1.61
PMS1P54277 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
PMS1P54277 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.99□□□□□ -1.61
PMS1P54277 RN7SKP13-201ENST00000515933 244 ntBASIC4.99□□□□□ -1.61
PMS1P54277 RNU6-1038P-201ENST00000516516 104 ntBASIC4.99□□□□□ -1.61
PMS1P54277 RN7SKP234-201ENST00000517173 224 ntBASIC4.99□□□□□ -1.61
PMS1P54277 MYL12AP1-201ENST00000518490 515 ntBASIC4.99□□□□□ -1.61
PMS1P54277 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.99□□□□□ -1.61
PMS1P54277 AC103783.1-201ENST00000520506 373 ntBASIC4.99□□□□□ -1.61
PMS1P54277 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.99□□□□□ -1.61
PMS1P54277 HNRNPCP4-201ENST00000571636 900 ntBASIC4.99□□□□□ -1.61
PMS1P54277 AC013244.1-201ENST00000604279 193 ntBASIC4.99□□□□□ -1.61
PMS1P54277 AC012443.1-201ENST00000605605 231 ntBASIC4.99□□□□□ -1.61
PMS1P54277 FAM25E-202ENST00000608562 189 ntBASIC4.99□□□□□ -1.61
PMS1P54277 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.99□□□□□ -1.61
PMS1P54277 AP001486.3-201ENST00000615334 372 ntBASIC4.99□□□□□ -1.61
PMS1P54277 AC090971.5-201ENST00000621102 293 ntBASIC4.99□□□□□ -1.61
PMS1P54277 BMS1P21-201ENST00000634565 365 ntBASIC4.99□□□□□ -1.61
PMS1P54277 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.99□□□□□ -1.61
PMS1P54277 GABPAP-201ENST00000419271 1356 ntBASIC4.99□□□□□ -1.61
PMS1P54277 MTND4P27-201ENST00000450813 1354 ntBASIC4.99□□□□□ -1.61
PMS1P54277 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.99□□□□□ -1.61
PMS1P54277 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.99□□□□□ -1.61
PMS1P54277 CPHL1P-201ENST00000461341 3407 ntBASIC4.99□□□□□ -1.61
PMS1P54277 MTND5P3-201ENST00000438536 1800 ntBASIC4.99□□□□□ -1.61
PMS1P54277 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PMS1P54277 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.99□□□□□ -1.61
PMS1P54277 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PMS1P54277 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PMS1P54277 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PMS1P54277 ZNF137P-201ENST00000456718 1920 ntBASIC4.98□□□□□ -1.61
PMS1P54277 AC139769.1-204ENST00000472297 1931 ntBASIC4.98□□□□□ -1.61
PMS1P54277 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
PMS1P54277 AC087190.4-201ENST00000574616 8334 ntBASIC4.98□□□□□ -1.61
PMS1P54277 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
PMS1P54277 RN7SKP115-201ENST00000363177 317 ntBASIC4.98□□□□□ -1.61
PMS1P54277 RNU6-960P-201ENST00000364056 120 ntBASIC4.98□□□□□ -1.61
PMS1P54277 SNORD115-7-201ENST00000365306 82 ntBASIC4.98□□□□□ -1.61
PMS1P54277 RNA5SP87-201ENST00000384155 118 ntBASIC4.98□□□□□ -1.61
PMS1P54277 RNA5SP372-201ENST00000390836 115 ntBASIC4.98□□□□□ -1.61
PMS1P54277 RPS4XP9-201ENST00000405151 780 ntBASIC4.98□□□□□ -1.61
PMS1P54277 AC092447.6-201ENST00000414578 210 ntBASIC4.98□□□□□ -1.61
PMS1P54277 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.98□□□□□ -1.61
PMS1P54277 MTCO2P27-201ENST00000420740 428 ntBASIC4.98□□□□□ -1.61
PMS1P54277 ELOCP18-201ENST00000434209 337 ntBASIC4.98□□□□□ -1.61
PMS1P54277 RPL23AP93-201ENST00000440847 484 ntBASIC4.98□□□□□ -1.61
PMS1P54277 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.98□□□□□ -1.61
PMS1P54277 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.98□□□□□ -1.61
PMS1P54277 PRPS1P1-201ENST00000445305 876 ntBASIC4.98□□□□□ -1.61
PMS1P54277 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.98□□□□□ -1.61
PMS1P54277 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.98□□□□□ -1.61
PMS1P54277 TPT1P13-201ENST00000449760 499 ntBASIC4.98□□□□□ -1.61
PMS1P54277 CEACAMP6-201ENST00000452007 574 ntBASIC4.98□□□□□ -1.61
PMS1P54277 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.98□□□□□ -1.61
PMS1P54277 RNU6-1208P-201ENST00000459588 107 ntBASIC4.98□□□□□ -1.61
PMS1P54277 AC092324.1-201ENST00000468671 324 ntBASIC4.98□□□□□ -1.61
PMS1P54277 RPS27AP1-201ENST00000475545 471 ntBASIC4.98□□□□□ -1.61
PMS1P54277 RN7SL826P-201ENST00000479724 288 ntBASIC4.98□□□□□ -1.61
PMS1P54277 AC083904.1-201ENST00000487828 231 ntBASIC4.98□□□□□ -1.61
PMS1P54277 RNU6-1170P-201ENST00000515974 106 ntBASIC4.98□□□□□ -1.61
PMS1P54277 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.98□□□□□ -1.61
PMS1P54277 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.98□□□□□ -1.61
PMS1P54277 AC090151.1-201ENST00000520784 730 ntBASIC4.98□□□□□ -1.61
PMS1P54277 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.98□□□□□ -1.61
PMS1P54277 AL390726.5-202ENST00000564800 256 ntBASIC4.98□□□□□ -1.61
PMS1P54277 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.98□□□□□ -1.61
PMS1P54277 AC093249.1-201ENST00000567049 203 ntBASIC4.98□□□□□ -1.61
PMS1P54277 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.98□□□□□ -1.61
PMS1P54277 AC024619.4-201ENST00000580924 316 ntBASIC4.98□□□□□ -1.61
PMS1P54277 AL669831.4-202ENST00000590817 238 ntBASIC4.98□□□□□ -1.61
PMS1P54277 AC006254.3-201ENST00000603353 884 ntBASIC4.98□□□□□ -1.61
PMS1P54277 AL162730.1-201ENST00000605734 292 ntBASIC4.98□□□□□ -1.61
PMS1P54277 AC092807.2-201ENST00000609367 243 ntBASIC4.98□□□□□ -1.61
PMS1P54277 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.98□□□□□ -1.61
PMS1P54277 AC091905.2-201ENST00000623143 306 ntBASIC4.98□□□□□ -1.61
PMS1P54277 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.98□□□□□ -1.61
PMS1P54277 AC055839.1-201ENST00000634467 498 ntBASIC4.98□□□□□ -1.61
PMS1P54277 AL592437.2-201ENST00000421655 2434 ntBASIC4.98□□□□□ -1.61
PMS1P54277 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
PMS1P54277 OR14L1P-202ENST00000641545 3009 ntBASIC4.98□□□□□ -1.61
PMS1P54277 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
PMS1P54277 EXOC5P1-201ENST00000510543 1969 ntBASIC4.98□□□□□ -1.61
PMS1P54277 SDAD1P1-202ENST00000524156 2051 ntBASIC4.98□□□□□ -1.61
PMS1P54277 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.98□□□□□ -1.61
PMS1P54277 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
PMS1P54277 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PMS1P54277 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.97□□□□□ -1.61
PMS1P54277 AC012618.3-205ENST00000637896 1496 ntBASIC4.97□□□□□ -1.61
PMS1P54277 RNU6-1284P-201ENST00000363701 100 ntBASIC4.97□□□□□ -1.61
PMS1P54277 RNU6-61P-201ENST00000365528 109 ntBASIC4.97□□□□□ -1.61
PMS1P54277 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
PMS1P54277 Y_RNA.576-201ENST00000384781 102 ntBASIC4.97□□□□□ -1.61
PMS1P54277 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
PMS1P54277 AL592114.1-201ENST00000403842 483 ntBASIC4.97□□□□□ -1.61
PMS1P54277 RNA5SP56-201ENST00000410277 118 ntBASIC4.97□□□□□ -1.61
PMS1P54277 RNU4-65P-201ENST00000410473 140 ntBASIC4.97□□□□□ -1.61
PMS1P54277 VDAC1P9-201ENST00000412766 841 ntBASIC4.97□□□□□ -1.61
PMS1P54277 BX323014.1-201ENST00000412876 237 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms