Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CLCNKAP51800 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
CLCNKAP51800 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.63□□□□□ -1.83
CLCNKAP51800 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CLCNKAP51800 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.63□□□□□ -1.83
CLCNKAP51800 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
CLCNKAP51800 RNU6-297P-201ENST00000384636 107 ntBASIC3.63□□□□□ -1.83
CLCNKAP51800 AL356421.1-201ENST00000403255 413 ntBASIC3.63□□□□□ -1.83
CLCNKAP51800 RNU2-16P-201ENST00000410712 136 ntBASIC3.63□□□□□ -1.83
CLCNKAP51800 RNU4-78P-201ENST00000410940 126 ntBASIC3.63□□□□□ -1.83
CLCNKAP51800 AC007899.1-201ENST00000412776 775 ntBASIC3.63□□□□□ -1.83
CLCNKAP51800 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.63□□□□□ -1.83
CLCNKAP51800 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.63□□□□□ -1.83
CLCNKAP51800 RPL21P32-201ENST00000419877 477 ntBASIC3.63□□□□□ -1.83
CLCNKAP51800 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.63□□□□□ -1.83
CLCNKAP51800 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.63□□□□□ -1.83
CLCNKAP51800 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.63□□□□□ -1.83
CLCNKAP51800 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CLCNKAP51800 PDSS1P2-201ENST00000449397 678 ntBASIC3.63□□□□□ -1.83
CLCNKAP51800 SNORD105B-201ENST00000458770 79 ntBASIC3.63□□□□□ -1.83
CLCNKAP51800 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.63□□□□□ -1.83
CLCNKAP51800 AC010342.1-201ENST00000514047 877 ntBASIC3.63□□□□□ -1.83
CLCNKAP51800 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.63□□□□□ -1.83
CLCNKAP51800 RN7SKP209-201ENST00000516888 304 ntBASIC3.63□□□□□ -1.83
CLCNKAP51800 RNU6-714P-201ENST00000516963 103 ntBASIC3.63□□□□□ -1.83
CLCNKAP51800 RNU6-1231P-201ENST00000517185 103 ntBASIC3.63□□□□□ -1.83
CLCNKAP51800 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.63□□□□□ -1.83
CLCNKAP51800 IGKV2D-19-201ENST00000523346 262 ntBASIC3.63□□□□□ -1.83
CLCNKAP51800 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.63□□□□□ -1.83
CLCNKAP51800 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.63□□□□□ -1.83
CLCNKAP51800 ZNF519P3-201ENST00000557158 1032 ntBASIC3.63□□□□□ -1.83
CLCNKAP51800 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.63□□□□□ -1.83
CLCNKAP51800 AC090615.1-201ENST00000577519 154 ntBASIC3.63□□□□□ -1.83
CLCNKAP51800 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.63□□□□□ -1.83
CLCNKAP51800 MIR4429-201ENST00000580105 73 ntBASIC3.63□□□□□ -1.83
CLCNKAP51800 AC005771.1-201ENST00000585581 349 ntBASIC3.63□□□□□ -1.83
CLCNKAP51800 TPMTP1-201ENST00000592307 737 ntBASIC3.63□□□□□ -1.83
CLCNKAP51800 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.63□□□□□ -1.83
CLCNKAP51800 AC112191.3-201ENST00000604371 277 ntBASIC3.63□□□□□ -1.83
CLCNKAP51800 BRDTP1-201ENST00000605735 677 ntBASIC3.63□□□□□ -1.83
CLCNKAP51800 AC005332.10-201ENST00000612725 619 ntBASIC3.63□□□□□ -1.83
CLCNKAP51800 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.63□□□□□ -1.83
CLCNKAP51800 MIR6075-201ENST00000620782 95 ntBASIC3.63□□□□□ -1.83
CLCNKAP51800 AL590240.3-201ENST00000621416 943 ntBASIC3.63□□□□□ -1.83
CLCNKAP51800 AC091905.1-201ENST00000624400 311 ntBASIC3.63□□□□□ -1.83
CLCNKAP51800 AP000553.6-201ENST00000641242 118 ntBASIC3.63□□□□□ -1.83
CLCNKAP51800 AP001486.2-201ENST00000561652 5113 ntBASIC3.63□□□□□ -1.83
CLCNKAP51800 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
CLCNKAP51800 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CLCNKAP51800 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CLCNKAP51800 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CLCNKAP51800 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CLCNKAP51800 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.63□□□□□ -1.83
CLCNKAP51800 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CLCNKAP51800 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.62□□□□□ -1.83
CLCNKAP51800 AC092447.10-201ENST00000620607 1652 ntBASIC3.62□□□□□ -1.83
CLCNKAP51800 MFSD8-236ENST00000641509 4050 ntBASIC3.62□□□□□ -1.83
CLCNKAP51800 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CLCNKAP51800 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CLCNKAP51800 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.62□□□□□ -1.83
CLCNKAP51800 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CLCNKAP51800 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.62□□□□□ -1.83
CLCNKAP51800 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.62□□□□□ -1.83
CLCNKAP51800 RNA5SP51-201ENST00000364750 119 ntBASIC3.62□□□□□ -1.83
CLCNKAP51800 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CLCNKAP51800 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CLCNKAP51800 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.62□□□□□ -1.83
CLCNKAP51800 RNU6-1207P-201ENST00000384343 107 ntBASIC3.62□□□□□ -1.83
CLCNKAP51800 SNORA40.3-201ENST00000390964 122 ntBASIC3.62□□□□□ -1.83
CLCNKAP51800 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC3.62□□□□□ -1.83
CLCNKAP51800 AP000567.1-201ENST00000406413 156 ntBASIC3.62□□□□□ -1.83
CLCNKAP51800 RPL30P2-201ENST00000414021 291 ntBASIC3.62□□□□□ -1.83
CLCNKAP51800 AC007390.1-201ENST00000415722 356 ntBASIC3.62□□□□□ -1.83
CLCNKAP51800 AC245052.5-201ENST00000416320 649 ntBASIC3.62□□□□□ -1.83
CLCNKAP51800 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.62□□□□□ -1.83
CLCNKAP51800 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.62□□□□□ -1.83
CLCNKAP51800 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.62□□□□□ -1.83
CLCNKAP51800 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.62□□□□□ -1.83
CLCNKAP51800 SETP5-201ENST00000437270 562 ntBASIC3.62□□□□□ -1.83
CLCNKAP51800 VN1R34P-201ENST00000447387 883 ntBASIC3.62□□□□□ -1.83
CLCNKAP51800 RPS3AP46-201ENST00000448352 682 ntBASIC3.62□□□□□ -1.83
CLCNKAP51800 snoU13.8-201ENST00000458890 104 ntBASIC3.62□□□□□ -1.83
CLCNKAP51800 RN7SL93P-201ENST00000463035 293 ntBASIC3.62□□□□□ -1.83
CLCNKAP51800 AC034222.1-201ENST00000494052 532 ntBASIC3.62□□□□□ -1.83
CLCNKAP51800 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.62□□□□□ -1.83
CLCNKAP51800 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.62□□□□□ -1.83
CLCNKAP51800 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.62□□□□□ -1.83
CLCNKAP51800 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.62□□□□□ -1.83
CLCNKAP51800 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.62□□□□□ -1.83
CLCNKAP51800 RN7SKP18-201ENST00000516005 275 ntBASIC3.62□□□□□ -1.83
CLCNKAP51800 AP004371.1-201ENST00000525240 214 ntBASIC3.62□□□□□ -1.83
CLCNKAP51800 AP003033.1-201ENST00000527244 415 ntBASIC3.62□□□□□ -1.83
CLCNKAP51800 AP003385.6-201ENST00000531603 374 ntBASIC3.62□□□□□ -1.83
CLCNKAP51800 AC109635.4-202ENST00000531666 412 ntBASIC3.62□□□□□ -1.83
CLCNKAP51800 AC008011.1-201ENST00000545989 227 ntBASIC3.62□□□□□ -1.83
CLCNKAP51800 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.62□□□□□ -1.83
CLCNKAP51800 AC004853.1-201ENST00000604902 698 ntBASIC3.62□□□□□ -1.83
CLCNKAP51800 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.62□□□□□ -1.83
CLCNKAP51800 AC092354.2-201ENST00000607786 514 ntBASIC3.62□□□□□ -1.83
CLCNKAP51800 AC006566.1-201ENST00000608943 513 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms