Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 AC233702.1-201ENST00000482905 502 ntBASIC3.21□□□□□ -1.89
SMARCA2P51531 AC093591.1-201ENST00000491435 481 ntBASIC3.21□□□□□ -1.89
SMARCA2P51531 MIR449C-201ENST00000516047 92 ntBASIC3.21□□□□□ -1.89
SMARCA2P51531 SNORA31.15-201ENST00000516771 132 ntBASIC3.21□□□□□ -1.89
SMARCA2P51531 RN7SKP234-201ENST00000517173 224 ntBASIC3.21□□□□□ -1.89
SMARCA2P51531 HSPE1P20-201ENST00000538133 289 ntBASIC3.21□□□□□ -1.89
SMARCA2P51531 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.21□□□□□ -1.89
SMARCA2P51531 AC103810.1-201ENST00000579873 453 ntBASIC3.21□□□□□ -1.89
SMARCA2P51531 AL035411.2-201ENST00000604022 421 ntBASIC3.21□□□□□ -1.89
SMARCA2P51531 AL391987.6-201ENST00000305671 199 ntBASIC3.21□□□□□ -1.9
SMARCA2P51531 AC009237.2-201ENST00000421358 284 ntBASIC3.21□□□□□ -1.9
SMARCA2P51531 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.21□□□□□ -1.9
SMARCA2P51531 AL157827.1-201ENST00000447622 132 ntBASIC3.21□□□□□ -1.9
SMARCA2P51531 AL109741.2-201ENST00000455561 343 ntBASIC3.21□□□□□ -1.9
SMARCA2P51531 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC3.21□□□□□ -1.9
SMARCA2P51531 LLPHP1-201ENST00000603571 367 ntBASIC3.21□□□□□ -1.9
SMARCA2P51531 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SMARCA2P51531 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
SMARCA2P51531 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.21□□□□□ -1.9
SMARCA2P51531 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SMARCA2P51531 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.2□□□□□ -1.9
SMARCA2P51531 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.2□□□□□ -1.9
SMARCA2P51531 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.2□□□□□ -1.9
SMARCA2P51531 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.2□□□□□ -1.9
SMARCA2P51531 RPL7P37-201ENST00000425095 738 ntBASIC3.2□□□□□ -1.9
SMARCA2P51531 XKRYP6-201ENST00000440468 1116 ntBASIC3.2□□□□□ -1.9
SMARCA2P51531 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.2□□□□□ -1.9
SMARCA2P51531 XKRYP3-201ENST00000442113 1116 ntBASIC3.2□□□□□ -1.9
SMARCA2P51531 RNU6-717P-201ENST00000459076 104 ntBASIC3.2□□□□□ -1.9
SMARCA2P51531 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC3.2□□□□□ -1.9
SMARCA2P51531 AC090751.1-201ENST00000566966 267 ntBASIC3.2□□□□□ -1.9
SMARCA2P51531 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.19□□□□□ -1.9
SMARCA2P51531 Y_RNA.327-201ENST00000365201 102 ntBASIC3.19□□□□□ -1.9
SMARCA2P51531 FNDC3CP-201ENST00000420795 1155 ntBASIC3.19□□□□□ -1.9
SMARCA2P51531 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.19□□□□□ -1.9
SMARCA2P51531 HMGN2P13-201ENST00000476476 274 ntBASIC3.19□□□□□ -1.9
SMARCA2P51531 AC079804.2-201ENST00000490376 200 ntBASIC3.19□□□□□ -1.9
SMARCA2P51531 GTF2IP9-201ENST00000502460 301 ntBASIC3.19□□□□□ -1.9
SMARCA2P51531 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC3.19□□□□□ -1.9
SMARCA2P51531 AC009965.2-201ENST00000425328 970 ntBASIC3.18□□□□□ -1.9
SMARCA2P51531 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.18□□□□□ -1.9
SMARCA2P51531 SSXP4-201ENST00000451349 245 ntBASIC3.18□□□□□ -1.9
SMARCA2P51531 AL021397.1-201ENST00000451806 248 ntBASIC3.18□□□□□ -1.9
SMARCA2P51531 PPP1R2P5-201ENST00000457256 603 ntBASIC3.18□□□□□ -1.9
SMARCA2P51531 RPS15AP17-201ENST00000470598 390 ntBASIC3.18□□□□□ -1.9
SMARCA2P51531 AC109486.1-201ENST00000486833 374 ntBASIC3.18□□□□□ -1.9
SMARCA2P51531 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC3.18□□□□□ -1.9
SMARCA2P51531 FABP5P6-201ENST00000510588 409 ntBASIC3.18□□□□□ -1.9
SMARCA2P51531 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
SMARCA2P51531 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.18□□□□□ -1.9
SMARCA2P51531 AL359740.1-201ENST00000624340 592 ntBASIC3.18□□□□□ -1.9
SMARCA2P51531 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
SMARCA2P51531 AL513331.1-201ENST00000411908 397 ntBASIC3.17□□□□□ -1.9
SMARCA2P51531 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.17□□□□□ -1.9
SMARCA2P51531 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.17□□□□□ -1.9
SMARCA2P51531 AC103987.3-201ENST00000582071 292 ntBASIC3.17□□□□□ -1.9
SMARCA2P51531 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC3.17□□□□□ -1.9
SMARCA2P51531 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.17□□□□□ -1.9
SMARCA2P51531 DUXAP3-201ENST00000603616 594 ntBASIC3.17□□□□□ -1.9
SMARCA2P51531 AC006023.2-201ENST00000609916 167 ntBASIC3.17□□□□□ -1.9
SMARCA2P51531 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SMARCA2P51531 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
SMARCA2P51531 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SMARCA2P51531 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
SMARCA2P51531 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.17□□□□□ -1.9
SMARCA2P51531 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.17□□□□□ -1.9
SMARCA2P51531 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.17□□□□□ -1.9
SMARCA2P51531 AC025033.1-201ENST00000463883 194 ntBASIC3.17□□□□□ -1.9
SMARCA2P51531 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
SMARCA2P51531 AC105429.2-201ENST00000610567 517 ntBASIC3.17□□□□□ -1.9
SMARCA2P51531 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.17□□□□□ -1.9
SMARCA2P51531 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC3.17□□□□□ -1.9
SMARCA2P51531 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
SMARCA2P51531 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.16□□□□□ -1.9
SMARCA2P51531 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
SMARCA2P51531 METTL21EP-201ENST00000298105 713 ntBASIC3.16□□□□□ -1.9
SMARCA2P51531 CCNB2P1-201ENST00000399411 1150 ntBASIC3.16□□□□□ -1.9
SMARCA2P51531 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.16□□□□□ -1.9
SMARCA2P51531 RPL21P104-201ENST00000464143 478 ntBASIC3.16□□□□□ -1.9
SMARCA2P51531 AC010627.1-201ENST00000503819 1294 ntBASIC3.16□□□□□ -1.9
SMARCA2P51531 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.16□□□□□ -1.9
SMARCA2P51531 RNA5SP102-201ENST00000516865 106 ntBASIC3.16□□□□□ -1.9
SMARCA2P51531 SNORD59.2-201ENST00000516873 68 ntBASIC3.16□□□□□ -1.9
SMARCA2P51531 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC3.16□□□□□ -1.9
SMARCA2P51531 AC087441.2-201ENST00000529141 262 ntBASIC3.16□□□□□ -1.9
SMARCA2P51531 PTP4A1P6-201ENST00000531034 478 ntBASIC3.16□□□□□ -1.9
SMARCA2P51531 PRELID2P1-201ENST00000552837 301 ntBASIC3.16□□□□□ -1.9
SMARCA2P51531 PSMA3P-201ENST00000555485 635 ntBASIC3.16□□□□□ -1.9
SMARCA2P51531 MIR3690-201ENST00000580266 75 ntBASIC3.16□□□□□ -1.9
SMARCA2P51531 MIR4452-201ENST00000583004 71 ntBASIC3.16□□□□□ -1.9
SMARCA2P51531 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.16□□□□□ -1.9
SMARCA2P51531 AC002984.1-201ENST00000591692 448 ntBASIC3.16□□□□□ -1.9
SMARCA2P51531 AL512598.1-201ENST00000610158 273 ntBASIC3.16□□□□□ -1.9
SMARCA2P51531 MIR6895-201ENST00000613497 78 ntBASIC3.16□□□□□ -1.9
SMARCA2P51531 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SMARCA2P51531 SNORD114-26-201ENST00000363543 72 ntBASIC3.15□□□□□ -1.91
SMARCA2P51531 SSXP9-201ENST00000417503 292 ntBASIC3.15□□□□□ -1.91
SMARCA2P51531 HMGN1P28-201ENST00000521340 364 ntBASIC3.15□□□□□ -1.91
SMARCA2P51531 MTCO3P24-201ENST00000572729 782 ntBASIC3.15□□□□□ -1.91
SMARCA2P51531 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms