Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC5.39□□□□□ -1.55
RNF144AP50876 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.39□□□□□ -1.55
RNF144AP50876 AC073593.1-201ENST00000624500 411 ntBASIC5.39□□□□□ -1.55
RNF144AP50876 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC5.39□□□□□ -1.55
RNF144AP50876 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.39□□□□□ -1.55
RNF144AP50876 AC079776.5-201ENST00000641920 211 ntBASIC5.39□□□□□ -1.55
RNF144AP50876 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
RNF144AP50876 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RNF144AP50876 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.39□□□□□ -1.55
RNF144AP50876 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.39□□□□□ -1.55
RNF144AP50876 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
RNF144AP50876 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
RNF144AP50876 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RNF144AP50876 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
RNF144AP50876 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RNF144AP50876 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RNF144AP50876 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
RNF144AP50876 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RNF144AP50876 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.38□□□□□ -1.55
RNF144AP50876 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.38□□□□□ -1.55
RNF144AP50876 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.38□□□□□ -1.55
RNF144AP50876 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RNF144AP50876 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.38□□□□□ -1.55
RNF144AP50876 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
RNF144AP50876 MIR133A2-201ENST00000347538 102 ntBASIC5.38□□□□□ -1.55
RNF144AP50876 RNA5SP477-201ENST00000362639 119 ntBASIC5.38□□□□□ -1.55
RNF144AP50876 SNORD113-8-201ENST00000363497 74 ntBASIC5.38□□□□□ -1.55
RNF144AP50876 Y_RNA.358-201ENST00000365491 99 ntBASIC5.38□□□□□ -1.55
RNF144AP50876 RN7SKP81-201ENST00000365603 331 ntBASIC5.38□□□□□ -1.55
RNF144AP50876 AC013442.1-201ENST00000397347 228 ntBASIC5.38□□□□□ -1.55
RNF144AP50876 AL033519.2-201ENST00000403958 392 ntBASIC5.38□□□□□ -1.55
RNF144AP50876 AC063979.1-201ENST00000415539 377 ntBASIC5.38□□□□□ -1.55
RNF144AP50876 AC017079.2-201ENST00000416102 485 ntBASIC5.38□□□□□ -1.55
RNF144AP50876 AL353621.1-201ENST00000418219 243 ntBASIC5.38□□□□□ -1.55
RNF144AP50876 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.38□□□□□ -1.55
RNF144AP50876 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.38□□□□□ -1.55
RNF144AP50876 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC5.38□□□□□ -1.55
RNF144AP50876 GAPDHP58-201ENST00000438477 1006 ntBASIC5.38□□□□□ -1.55
RNF144AP50876 RPS11P1-201ENST00000451072 473 ntBASIC5.38□□□□□ -1.55
RNF144AP50876 RPL23AP2-201ENST00000471227 466 ntBASIC5.38□□□□□ -1.55
RNF144AP50876 AC006539.1-201ENST00000481419 501 ntBASIC5.38□□□□□ -1.55
RNF144AP50876 RPS27AP13-201ENST00000498403 237 ntBASIC5.38□□□□□ -1.55
RNF144AP50876 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.38□□□□□ -1.55
RNF144AP50876 HIGD1AP3-201ENST00000515857 278 ntBASIC5.38□□□□□ -1.55
RNF144AP50876 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC5.38□□□□□ -1.55
RNF144AP50876 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC5.38□□□□□ -1.55
RNF144AP50876 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RNF144AP50876 AC026826.3-201ENST00000561747 158 ntBASIC5.38□□□□□ -1.55
RNF144AP50876 AC022884.2-201ENST00000578535 580 ntBASIC5.38□□□□□ -1.55
RNF144AP50876 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.38□□□□□ -1.55
RNF144AP50876 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.38□□□□□ -1.55
RNF144AP50876 AC123786.2-201ENST00000603459 275 ntBASIC5.38□□□□□ -1.55
RNF144AP50876 AC098826.3-201ENST00000603823 466 ntBASIC5.38□□□□□ -1.55
RNF144AP50876 AC006077.1-201ENST00000604746 343 ntBASIC5.38□□□□□ -1.55
RNF144AP50876 AC123912.5-201ENST00000605470 343 ntBASIC5.38□□□□□ -1.55
RNF144AP50876 CENPF-206ENST00000614578 528 ntTSL 5 BASIC5.38□□□□□ -1.55
RNF144AP50876 AL450472.3-201ENST00000615578 367 ntBASIC5.38□□□□□ -1.55
RNF144AP50876 AC245014.3-201ENST00000618589 347 ntBASIC5.38□□□□□ -1.55
RNF144AP50876 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC5.38□□□□□ -1.55
RNF144AP50876 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
RNF144AP50876 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RNF144AP50876 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RNF144AP50876 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
RNF144AP50876 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RNF144AP50876 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.38□□□□□ -1.55
RNF144AP50876 MFSD8-239ENST00000641590 2479 ntBASIC5.38□□□□□ -1.55
RNF144AP50876 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RNF144AP50876 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RNF144AP50876 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RNF144AP50876 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
RNF144AP50876 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.37□□□□□ -1.55
RNF144AP50876 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RNF144AP50876 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RNF144AP50876 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RNF144AP50876 AC114774.1-201ENST00000507410 1770 ntBASIC5.37□□□□□ -1.55
RNF144AP50876 OR9K1P-202ENST00000641111 3217 ntBASIC5.37□□□□□ -1.55
RNF144AP50876 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.37□□□□□ -1.55
RNF144AP50876 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RNF144AP50876 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
RNF144AP50876 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
RNF144AP50876 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
RNF144AP50876 AL360270.2-201ENST00000562952 5985 ntBASIC5.37□□□□□ -1.55
RNF144AP50876 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.37□□□□□ -1.55
RNF144AP50876 RNU6-989P-201ENST00000362756 107 ntBASIC5.37□□□□□ -1.55
RNF144AP50876 RNU6-1290P-201ENST00000362957 109 ntBASIC5.37□□□□□ -1.55
RNF144AP50876 RNA5SP433-201ENST00000364491 114 ntBASIC5.37□□□□□ -1.55
RNF144AP50876 RNU6-47P-201ENST00000383866 107 ntBASIC5.37□□□□□ -1.55
RNF144AP50876 RNU6-1179P-201ENST00000384667 107 ntBASIC5.37□□□□□ -1.55
RNF144AP50876 RNU6-821P-201ENST00000390995 107 ntBASIC5.37□□□□□ -1.55
RNF144AP50876 RPL21P75-201ENST00000396599 483 ntBASIC5.37□□□□□ -1.55
RNF144AP50876 RPL21P28-201ENST00000401418 483 ntBASIC5.37□□□□□ -1.55
RNF144AP50876 MRPL53P1-201ENST00000414323 319 ntBASIC5.37□□□□□ -1.55
RNF144AP50876 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.37□□□□□ -1.55
RNF144AP50876 AL590556.1-201ENST00000423231 483 ntBASIC5.37□□□□□ -1.55
RNF144AP50876 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC5.37□□□□□ -1.55
RNF144AP50876 AC126120.1-201ENST00000431082 470 ntBASIC5.37□□□□□ -1.55
RNF144AP50876 GAPDHP48-201ENST00000436626 961 ntBASIC5.37□□□□□ -1.55
RNF144AP50876 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.37□□□□□ -1.55
RNF144AP50876 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
RNF144AP50876 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms