Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 GDI2P2-201ENST00000445131 608 ntBASIC3.11□□□□□ -1.91
CDX1P47902 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.11□□□□□ -1.91
CDX1P47902 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.11□□□□□ -1.91
CDX1P47902 MRPS31P2-201ENST00000451581 518 ntBASIC3.11□□□□□ -1.91
CDX1P47902 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.11□□□□□ -1.91
CDX1P47902 NANOGP10-201ENST00000453325 895 ntBASIC3.11□□□□□ -1.91
CDX1P47902 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.11□□□□□ -1.91
CDX1P47902 RPS27P29-201ENST00000463110 252 ntBASIC3.11□□□□□ -1.91
CDX1P47902 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CDX1P47902 VN1R105P-201ENST00000486595 910 ntBASIC3.11□□□□□ -1.91
CDX1P47902 AC112198.1-201ENST00000505369 1220 ntBASIC3.11□□□□□ -1.91
CDX1P47902 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.11□□□□□ -1.91
CDX1P47902 AC026402.1-201ENST00000513642 170 ntBASIC3.11□□□□□ -1.91
CDX1P47902 RNU6-390P-201ENST00000516259 103 ntBASIC3.11□□□□□ -1.91
CDX1P47902 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.11□□□□□ -1.91
CDX1P47902 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.11□□□□□ -1.91
CDX1P47902 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.11□□□□□ -1.91
CDX1P47902 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.11□□□□□ -1.91
CDX1P47902 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.11□□□□□ -1.91
CDX1P47902 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.11□□□□□ -1.91
CDX1P47902 AL355836.1-201ENST00000555951 870 ntBASIC3.11□□□□□ -1.91
CDX1P47902 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.11□□□□□ -1.91
CDX1P47902 AC091489.2-201ENST00000566263 604 ntBASIC3.11□□□□□ -1.91
CDX1P47902 AC120057.2-201ENST00000571520 271 ntBASIC3.11□□□□□ -1.91
CDX1P47902 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CDX1P47902 AP001981.2-201ENST00000603241 418 ntBASIC3.11□□□□□ -1.91
CDX1P47902 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.11□□□□□ -1.91
CDX1P47902 MIR6076-201ENST00000617521 113 ntBASIC3.11□□□□□ -1.91
CDX1P47902 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.11□□□□□ -1.91
CDX1P47902 AC078883.4-201ENST00000623218 367 ntBASIC3.11□□□□□ -1.91
CDX1P47902 AC091931.1-201ENST00000623488 728 ntBASIC3.11□□□□□ -1.91
CDX1P47902 AC034229.5-201ENST00000624258 185 ntBASIC3.11□□□□□ -1.91
CDX1P47902 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.11□□□□□ -1.91
CDX1P47902 SNORA50A-202ENST00000629536 136 ntBASIC3.11□□□□□ -1.91
CDX1P47902 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.11□□□□□ -1.91
CDX1P47902 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.11□□□□□ -1.91
CDX1P47902 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
CDX1P47902 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CDX1P47902 PABPC1P9-201ENST00000426076 1612 ntBASIC3.11□□□□□ -1.91
CDX1P47902 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CDX1P47902 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CDX1P47902 SRP72P2-201ENST00000344851 1979 ntBASIC3.11□□□□□ -1.91
CDX1P47902 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.1□□□□□ -1.91
CDX1P47902 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CDX1P47902 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CDX1P47902 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
CDX1P47902 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CDX1P47902 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CDX1P47902 RNU1-39P-201ENST00000383897 165 ntBASIC3.1□□□□□ -1.91
CDX1P47902 HMGB3P23-201ENST00000414981 585 ntBASIC3.1□□□□□ -1.91
CDX1P47902 AC245054.1-201ENST00000420944 258 ntBASIC3.1□□□□□ -1.91
CDX1P47902 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.1□□□□□ -1.91
CDX1P47902 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.1□□□□□ -1.91
CDX1P47902 MED14P1-201ENST00000430517 648 ntBASIC3.1□□□□□ -1.91
CDX1P47902 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.1□□□□□ -1.91
CDX1P47902 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.1□□□□□ -1.91
CDX1P47902 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.1□□□□□ -1.91
CDX1P47902 MTND1P26-201ENST00000440488 538 ntBASIC3.1□□□□□ -1.91
CDX1P47902 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.1□□□□□ -1.91
CDX1P47902 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.1□□□□□ -1.91
CDX1P47902 ELOCP30-201ENST00000447108 299 ntBASIC3.1□□□□□ -1.91
CDX1P47902 ZNF736P5Y-201ENST00000451173 805 ntBASIC3.1□□□□□ -1.91
CDX1P47902 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.1□□□□□ -1.91
CDX1P47902 RNU7-59P-201ENST00000459101 61 ntBASIC3.1□□□□□ -1.91
CDX1P47902 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CDX1P47902 RPS3AP43-201ENST00000479743 781 ntBASIC3.1□□□□□ -1.91
CDX1P47902 RPS4XP22-201ENST00000480755 780 ntBASIC3.1□□□□□ -1.91
CDX1P47902 RPL30P14-201ENST00000482744 348 ntBASIC3.1□□□□□ -1.91
CDX1P47902 AP000563.1-201ENST00000490865 758 ntBASIC3.1□□□□□ -1.91
CDX1P47902 AC092185.1-201ENST00000491371 97 ntBASIC3.1□□□□□ -1.91
CDX1P47902 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.1□□□□□ -1.91
CDX1P47902 NPM1P41-201ENST00000512920 831 ntBASIC3.1□□□□□ -1.91
CDX1P47902 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.1□□□□□ -1.91
CDX1P47902 AC025881.1-201ENST00000518851 512 ntBASIC3.1□□□□□ -1.91
CDX1P47902 NDUFB9P3-201ENST00000521269 501 ntBASIC3.1□□□□□ -1.91
CDX1P47902 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.1□□□□□ -1.91
CDX1P47902 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.1□□□□□ -1.91
CDX1P47902 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.1□□□□□ -1.91
CDX1P47902 TRAV37-201ENST00000553906 342 ntBASIC3.1□□□□□ -1.91
CDX1P47902 AL163153.1-201ENST00000554223 283 ntBASIC3.1□□□□□ -1.91
CDX1P47902 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.1□□□□□ -1.91
CDX1P47902 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.1□□□□□ -1.91
CDX1P47902 AL133153.1-201ENST00000557756 303 ntBASIC3.1□□□□□ -1.91
CDX1P47902 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.1□□□□□ -1.91
CDX1P47902 WISP1-OT1-201ENST00000602893 642 ntBASIC3.1□□□□□ -1.91
CDX1P47902 AC019226.2-201ENST00000625973 424 ntBASIC3.1□□□□□ -1.91
CDX1P47902 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
CDX1P47902 AC005183.1-201ENST00000603687 1979 ntBASIC3.1□□□□□ -1.91
CDX1P47902 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
CDX1P47902 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.1□□□□□ -1.91
CDX1P47902 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.09□□□□□ -1.91
CDX1P47902 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.09□□□□□ -1.91
CDX1P47902 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.09□□□□□ -1.91
CDX1P47902 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CDX1P47902 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CDX1P47902 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CDX1P47902 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
CDX1P47902 Y_RNA.46-201ENST00000362695 102 ntBASIC3.09□□□□□ -1.91
CDX1P47902 SNORA1.3-201ENST00000384676 136 ntBASIC3.09□□□□□ -1.91
CDX1P47902 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms