Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC2.51□□□□□ -2.01
COL18A1P39060 SNORA31.13-201ENST00000516624 135 ntBASIC2.51□□□□□ -2.01
COL18A1P39060 RN7SKP277-201ENST00000516895 283 ntBASIC2.51□□□□□ -2.01
COL18A1P39060 RNU6-250P-201ENST00000516958 103 ntBASIC2.51□□□□□ -2.01
COL18A1P39060 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC2.51□□□□□ -2.01
COL18A1P39060 AC004923.2-201ENST00000529649 369 ntBASIC2.51□□□□□ -2.01
COL18A1P39060 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.51□□□□□ -2.01
COL18A1P39060 DNAJC19P9-201ENST00000555084 351 ntBASIC2.51□□□□□ -2.01
COL18A1P39060 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC2.51□□□□□ -2.01
COL18A1P39060 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC2.51□□□□□ -2.01
COL18A1P39060 RPP40P2-201ENST00000603596 712 ntBASIC2.51□□□□□ -2.01
COL18A1P39060 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.51□□□□□ -2.01
COL18A1P39060 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.51□□□□□ -2.01
COL18A1P39060 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
COL18A1P39060 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
COL18A1P39060 TAF9BP2-201ENST00000400856 499 ntBASIC2.51□□□□□ -2.01
COL18A1P39060 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC2.51□□□□□ -2.01
COL18A1P39060 CR769767.1-201ENST00000436337 346 ntBASIC2.51□□□□□ -2.01
COL18A1P39060 YWHAZP7-201ENST00000436906 631 ntBASIC2.51□□□□□ -2.01
COL18A1P39060 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC2.51□□□□□ -2.01
COL18A1P39060 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC2.51□□□□□ -2.01
COL18A1P39060 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.51□□□□□ -2.01
COL18A1P39060 RNA5SP402-201ENST00000517148 110 ntBASIC2.51□□□□□ -2.01
COL18A1P39060 AP003385.6-201ENST00000531603 374 ntBASIC2.51□□□□□ -2.01
COL18A1P39060 AC027104.1-201ENST00000563702 681 ntBASIC2.51□□□□□ -2.01
COL18A1P39060 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC2.51□□□□□ -2.01
COL18A1P39060 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC2.51□□□□□ -2.01
COL18A1P39060 AC011374.2-201ENST00000607135 526 ntBASIC2.51□□□□□ -2.01
COL18A1P39060 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.51□□□□□ -2.01
COL18A1P39060 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.5□□□□□ -2.01
COL18A1P39060 RNU6-40P-201ENST00000384254 107 ntBASIC2.5□□□□□ -2.01
COL18A1P39060 AL021407.1-201ENST00000404531 386 ntBASIC2.5□□□□□ -2.01
COL18A1P39060 XKRYP4-201ENST00000414395 483 ntBASIC2.5□□□□□ -2.01
COL18A1P39060 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC2.5□□□□□ -2.01
COL18A1P39060 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC2.5□□□□□ -2.01
COL18A1P39060 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.5□□□□□ -2.01
COL18A1P39060 XKRYP5-201ENST00000449659 483 ntBASIC2.5□□□□□ -2.01
COL18A1P39060 AC140059.1-201ENST00000489238 361 ntBASIC2.5□□□□□ -2.01
COL18A1P39060 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC2.5□□□□□ -2.01
COL18A1P39060 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC2.5□□□□□ -2.01
COL18A1P39060 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.5□□□□□ -2.01
COL18A1P39060 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC2.5□□□□□ -2.01
COL18A1P39060 RNU6-826P-201ENST00000516827 104 ntBASIC2.5□□□□□ -2.01
COL18A1P39060 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC2.5□□□□□ -2.01
COL18A1P39060 AC025016.1-201ENST00000616746 682 ntBASIC2.5□□□□□ -2.01
COL18A1P39060 AC011978.2-201ENST00000569835 2054 ntBASIC2.5□□□□□ -2.01
COL18A1P39060 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
COL18A1P39060 RNA5SP181-201ENST00000410246 98 ntBASIC2.49□□□□□ -2.01
COL18A1P39060 LINC01347-201ENST00000417964 355 ntBASIC2.49□□□□□ -2.01
COL18A1P39060 NDUFA5P4-201ENST00000436704 385 ntBASIC2.49□□□□□ -2.01
COL18A1P39060 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.49□□□□□ -2.01
COL18A1P39060 RPL23AP7-203ENST00000449021 469 ntBASIC2.49□□□□□ -2.01
COL18A1P39060 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.49□□□□□ -2.01
COL18A1P39060 RNU6-775P-201ENST00000459318 96 ntBASIC2.49□□□□□ -2.01
COL18A1P39060 AC008571.1-201ENST00000467232 300 ntBASIC2.49□□□□□ -2.01
COL18A1P39060 HAUS1P3-201ENST00000523909 662 ntBASIC2.49□□□□□ -2.01
COL18A1P39060 C1DP5-201ENST00000525775 383 ntBASIC2.49□□□□□ -2.01
COL18A1P39060 MTND2P26-201ENST00000528255 1029 ntBASIC2.49□□□□□ -2.01
COL18A1P39060 NDUFA5P6-201ENST00000542110 379 ntBASIC2.49□□□□□ -2.01
COL18A1P39060 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.49□□□□□ -2.01
COL18A1P39060 AC005951.1-201ENST00000576706 485 ntBASIC2.49□□□□□ -2.01
COL18A1P39060 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.49□□□□□ -2.01
COL18A1P39060 AC011468.4-201ENST00000603942 409 ntBASIC2.49□□□□□ -2.01
COL18A1P39060 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
COL18A1P39060 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
COL18A1P39060 RNA5SP295-201ENST00000362655 121 ntBASIC2.49□□□□□ -2.01
COL18A1P39060 AC083799.1-201ENST00000366451 910 ntBASIC2.49□□□□□ -2.01
COL18A1P39060 Y_RNA.540-201ENST00000384638 111 ntBASIC2.49□□□□□ -2.01
COL18A1P39060 HMGB1P10-201ENST00000395823 563 ntBASIC2.49□□□□□ -2.01
COL18A1P39060 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
COL18A1P39060 RNU2-17P-201ENST00000410290 190 ntBASIC2.49□□□□□ -2.01
COL18A1P39060 RNU2-21P-201ENST00000410368 188 ntBASIC2.49□□□□□ -2.01
COL18A1P39060 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC2.49□□□□□ -2.01
COL18A1P39060 PSMA2P3-201ENST00000429685 675 ntBASIC2.49□□□□□ -2.01
COL18A1P39060 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.49□□□□□ -2.01
COL18A1P39060 XKRY2-201ENST00000442362 1093 ntBASIC2.49□□□□□ -2.01
COL18A1P39060 snoU13.7-201ENST00000459220 104 ntBASIC2.49□□□□□ -2.01
COL18A1P39060 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC2.49□□□□□ -2.01
COL18A1P39060 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.49□□□□□ -2.01
COL18A1P39060 CIR1P1-201ENST00000524055 1133 ntBASIC2.49□□□□□ -2.01
COL18A1P39060 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC2.49□□□□□ -2.01
COL18A1P39060 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC2.49□□□□□ -2.01
COL18A1P39060 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC2.49□□□□□ -2.01
COL18A1P39060 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC2.49□□□□□ -2.01
COL18A1P39060 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC2.49□□□□□ -2.01
COL18A1P39060 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC2.49□□□□□ -2.01
COL18A1P39060 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC2.49□□□□□ -2.01
COL18A1P39060 AC010678.1-201ENST00000614118 713 ntBASIC2.49□□□□□ -2.01
COL18A1P39060 AC104820.1-201ENST00000624183 307 ntBASIC2.49□□□□□ -2.01
COL18A1P39060 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.49□□□□□ -2.01
COL18A1P39060 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
COL18A1P39060 SNORD115-48-201ENST00000364764 76 ntBASIC2.48□□□□□ -2.01
COL18A1P39060 NUP35P2-201ENST00000416748 943 ntBASIC2.48□□□□□ -2.01
COL18A1P39060 RPS15AP40-201ENST00000419621 391 ntBASIC2.48□□□□□ -2.01
COL18A1P39060 AC092754.2-201ENST00000463506 460 ntBASIC2.48□□□□□ -2.01
COL18A1P39060 TMEM248P1-201ENST00000510579 951 ntBASIC2.48□□□□□ -2.01
COL18A1P39060 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC2.48□□□□□ -2.01
COL18A1P39060 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC2.48□□□□□ -2.01
COL18A1P39060 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.48□□□□□ -2.01
COL18A1P39060 ISCA1P3-201ENST00000577104 373 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms