Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 MIR3651-201ENST00000630427 90 ntBASIC3.08□□□□□ -1.92
HMGCLP35914 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.08□□□□□ -1.92
HMGCLP35914 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HMGCLP35914 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
HMGCLP35914 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HMGCLP35914 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
HMGCLP35914 U3.6-201ENST00000363622 211 ntBASIC3.07□□□□□ -1.92
HMGCLP35914 RNU6-1122P-201ENST00000384449 107 ntBASIC3.07□□□□□ -1.92
HMGCLP35914 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.07□□□□□ -1.92
HMGCLP35914 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HMGCLP35914 MIR1250-201ENST00000408098 113 ntBASIC3.07□□□□□ -1.92
HMGCLP35914 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.07□□□□□ -1.92
HMGCLP35914 RN7SKP123-201ENST00000410732 291 ntBASIC3.07□□□□□ -1.92
HMGCLP35914 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.07□□□□□ -1.92
HMGCLP35914 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.07□□□□□ -1.92
HMGCLP35914 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.07□□□□□ -1.92
HMGCLP35914 HSPE1P1-201ENST00000421494 318 ntBASIC3.07□□□□□ -1.92
HMGCLP35914 RPL17P49-201ENST00000443728 411 ntBASIC3.07□□□□□ -1.92
HMGCLP35914 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.07□□□□□ -1.92
HMGCLP35914 ARPC3P5-201ENST00000448802 534 ntBASIC3.07□□□□□ -1.92
HMGCLP35914 MTND1P31-201ENST00000449206 961 ntBASIC3.07□□□□□ -1.92
HMGCLP35914 snoU109.4-201ENST00000458953 143 ntBASIC3.07□□□□□ -1.92
HMGCLP35914 AC097493.1-201ENST00000463958 372 ntBASIC3.07□□□□□ -1.92
HMGCLP35914 HMGB1P25-201ENST00000468402 607 ntBASIC3.07□□□□□ -1.92
HMGCLP35914 RPS26P21-201ENST00000475397 348 ntBASIC3.07□□□□□ -1.92
HMGCLP35914 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HMGCLP35914 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.07□□□□□ -1.92
HMGCLP35914 TMEM251P1-201ENST00000503717 318 ntBASIC3.07□□□□□ -1.92
HMGCLP35914 HSPE1P23-201ENST00000509838 286 ntBASIC3.07□□□□□ -1.92
HMGCLP35914 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.07□□□□□ -1.92
HMGCLP35914 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
HMGCLP35914 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.07□□□□□ -1.92
HMGCLP35914 RNU6-711P-201ENST00000517255 106 ntBASIC3.07□□□□□ -1.92
HMGCLP35914 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.07□□□□□ -1.92
HMGCLP35914 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.07□□□□□ -1.92
HMGCLP35914 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.07□□□□□ -1.92
HMGCLP35914 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.07□□□□□ -1.92
HMGCLP35914 AL512347.1-201ENST00000566420 503 ntBASIC3.07□□□□□ -1.92
HMGCLP35914 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.07□□□□□ -1.92
HMGCLP35914 AC034268.2-201ENST00000571784 482 ntBASIC3.07□□□□□ -1.92
HMGCLP35914 MTCO3P24-201ENST00000572729 782 ntBASIC3.07□□□□□ -1.92
HMGCLP35914 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.07□□□□□ -1.92
HMGCLP35914 AC012493.2-201ENST00000595083 291 ntBASIC3.07□□□□□ -1.92
HMGCLP35914 VN1R90P-201ENST00000595717 726 ntBASIC3.07□□□□□ -1.92
HMGCLP35914 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.07□□□□□ -1.92
HMGCLP35914 AL360219.1-201ENST00000610230 366 ntBASIC3.07□□□□□ -1.92
HMGCLP35914 AL442067.2-201ENST00000614033 363 ntBASIC3.07□□□□□ -1.92
HMGCLP35914 MIR8057-201ENST00000620957 69 ntBASIC3.07□□□□□ -1.92
HMGCLP35914 AC007490.1-201ENST00000624321 703 ntBASIC3.07□□□□□ -1.92
HMGCLP35914 AC097520.1-201ENST00000624435 385 ntBASIC3.07□□□□□ -1.92
HMGCLP35914 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.07□□□□□ -1.92
HMGCLP35914 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.07□□□□□ -1.92
HMGCLP35914 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HMGCLP35914 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HMGCLP35914 API5P2-201ENST00000397055 1498 ntBASIC3.07□□□□□ -1.92
HMGCLP35914 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.07□□□□□ -1.92
HMGCLP35914 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.07□□□□□ -1.92
HMGCLP35914 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HMGCLP35914 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HMGCLP35914 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HMGCLP35914 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
HMGCLP35914 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HMGCLP35914 RNU6-989P-201ENST00000362756 107 ntBASIC3.06□□□□□ -1.92
HMGCLP35914 RNU6-374P-201ENST00000364146 108 ntBASIC3.06□□□□□ -1.92
HMGCLP35914 SNORA70.4-201ENST00000365509 134 ntBASIC3.06□□□□□ -1.92
HMGCLP35914 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.06□□□□□ -1.92
HMGCLP35914 RNU6-761P-201ENST00000384148 107 ntBASIC3.06□□□□□ -1.92
HMGCLP35914 SNORD67-201ENST00000390833 111 ntBASIC3.06□□□□□ -1.92
HMGCLP35914 RPL31P1-201ENST00000398116 372 ntBASIC3.06□□□□□ -1.92
HMGCLP35914 DHFRP6-201ENST00000401776 268 ntBASIC3.06□□□□□ -1.92
HMGCLP35914 RNA5SP129-201ENST00000410276 118 ntBASIC3.06□□□□□ -1.92
HMGCLP35914 RN7SKP220-201ENST00000410611 288 ntBASIC3.06□□□□□ -1.92
HMGCLP35914 TPMTP2-201ENST00000414372 726 ntBASIC3.06□□□□□ -1.92
HMGCLP35914 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.06□□□□□ -1.92
HMGCLP35914 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.06□□□□□ -1.92
HMGCLP35914 AL035410.1-201ENST00000427409 427 ntBASIC3.06□□□□□ -1.92
HMGCLP35914 SGO1P2-201ENST00000429458 1589 ntBASIC3.06□□□□□ -1.92
HMGCLP35914 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC3.06□□□□□ -1.92
HMGCLP35914 SUMO2P2-201ENST00000456482 255 ntBASIC3.06□□□□□ -1.92
HMGCLP35914 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.06□□□□□ -1.92
HMGCLP35914 OR4G11P-201ENST00000492842 939 ntBASIC3.06□□□□□ -1.92
HMGCLP35914 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.06□□□□□ -1.92
HMGCLP35914 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.06□□□□□ -1.92
HMGCLP35914 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
HMGCLP35914 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.06□□□□□ -1.92
HMGCLP35914 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.06□□□□□ -1.92
HMGCLP35914 AC245166.1-201ENST00000521012 253 ntBASIC3.06□□□□□ -1.92
HMGCLP35914 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.06□□□□□ -1.92
HMGCLP35914 PSMA2P1-201ENST00000526365 646 ntBASIC3.06□□□□□ -1.92
HMGCLP35914 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.06□□□□□ -1.92
HMGCLP35914 AP003461.1-201ENST00000528866 78 ntBASIC3.06□□□□□ -1.92
HMGCLP35914 AP003385.6-201ENST00000531603 374 ntBASIC3.06□□□□□ -1.92
HMGCLP35914 ZNF321P-202ENST00000550843 495 ntBASIC3.06□□□□□ -1.92
HMGCLP35914 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC3.06□□□□□ -1.92
HMGCLP35914 AP000526.1-201ENST00000603308 1388 ntBASIC3.06□□□□□ -1.92
HMGCLP35914 AL009028.1-201ENST00000604895 802 ntBASIC3.06□□□□□ -1.92
HMGCLP35914 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.06□□□□□ -1.92
HMGCLP35914 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.06□□□□□ -1.92
HMGCLP35914 AC011477.1-204ENST00000623416 1325 ntBASIC3.06□□□□□ -1.92
HMGCLP35914 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms