Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.85□□□□□ -1.95
HOXA9P31269 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC2.85□□□□□ -1.95
HOXA9P31269 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.85□□□□□ -1.95
HOXA9P31269 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.85□□□□□ -1.95
HOXA9P31269 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.85□□□□□ -1.95
HOXA9P31269 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.85□□□□□ -1.95
HOXA9P31269 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC2.85□□□□□ -1.95
HOXA9P31269 HSPE1P14-201ENST00000605812 302 ntBASIC2.85□□□□□ -1.95
HOXA9P31269 AC004696.1-201ENST00000614345 607 ntBASIC2.85□□□□□ -1.95
HOXA9P31269 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
HOXA9P31269 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.85□□□□□ -1.95
HOXA9P31269 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.85□□□□□ -1.95
HOXA9P31269 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC2.85□□□□□ -1.95
HOXA9P31269 AC095031.1-201ENST00000623685 672 ntBASIC2.85□□□□□ -1.95
HOXA9P31269 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
HOXA9P31269 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
HOXA9P31269 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.84□□□□□ -1.95
HOXA9P31269 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
HOXA9P31269 RNU6-582P-201ENST00000362989 107 ntBASIC2.84□□□□□ -1.95
HOXA9P31269 SNORA67.4-201ENST00000384688 142 ntBASIC2.84□□□□□ -1.95
HOXA9P31269 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
HOXA9P31269 AL139039.1-201ENST00000401900 692 ntBASIC2.84□□□□□ -1.95
HOXA9P31269 RNU4-78P-201ENST00000410940 126 ntBASIC2.84□□□□□ -1.95
HOXA9P31269 RNA5SP508-201ENST00000411327 119 ntBASIC2.84□□□□□ -1.95
HOXA9P31269 BMS1P22-201ENST00000414726 313 ntBASIC2.84□□□□□ -1.95
HOXA9P31269 SSXP9-201ENST00000417503 292 ntBASIC2.84□□□□□ -1.95
HOXA9P31269 AL449283.1-202ENST00000418249 604 ntBASIC2.84□□□□□ -1.95
HOXA9P31269 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.84□□□□□ -1.95
HOXA9P31269 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.84□□□□□ -1.95
HOXA9P31269 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.84□□□□□ -1.95
HOXA9P31269 RPS29P6-201ENST00000438196 145 ntBASIC2.84□□□□□ -1.95
HOXA9P31269 RPS26P56-201ENST00000444468 240 ntBASIC2.84□□□□□ -1.95
HOXA9P31269 Z96811.1-201ENST00000445880 108 ntBASIC2.84□□□□□ -1.95
HOXA9P31269 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC2.84□□□□□ -1.95
HOXA9P31269 HSPE1P6-201ENST00000479457 291 ntBASIC2.84□□□□□ -1.95
HOXA9P31269 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
HOXA9P31269 AC048346.1-201ENST00000510247 144 ntBASIC2.84□□□□□ -1.95
HOXA9P31269 RNA5SP76-201ENST00000516277 87 ntBASIC2.84□□□□□ -1.95
HOXA9P31269 RNU6-885P-201ENST00000516607 104 ntBASIC2.84□□□□□ -1.95
HOXA9P31269 AC104986.1-201ENST00000517978 436 ntBASIC2.84□□□□□ -1.95
HOXA9P31269 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC2.84□□□□□ -1.95
HOXA9P31269 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC2.84□□□□□ -1.95
HOXA9P31269 AP000790.1-201ENST00000528891 737 ntBASIC2.84□□□□□ -1.95
HOXA9P31269 DEFB130C-202ENST00000530001 230 ntBASIC2.84□□□□□ -1.95
HOXA9P31269 CASP1-212ENST00000531166 300 ntTSL 5 BASIC2.84□□□□□ -1.95
HOXA9P31269 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC2.84□□□□□ -1.95
HOXA9P31269 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.84□□□□□ -1.95
HOXA9P31269 AC091544.4-201ENST00000555268 342 ntBASIC2.84□□□□□ -1.95
HOXA9P31269 AADACP1-206ENST00000561502 1193 ntBASIC2.84□□□□□ -1.95
HOXA9P31269 AP001542.2-201ENST00000593141 364 ntBASIC2.84□□□□□ -1.95
HOXA9P31269 AC091057.2-201ENST00000602594 792 ntBASIC2.84□□□□□ -1.95
HOXA9P31269 AL445435.1-201ENST00000604232 665 ntBASIC2.84□□□□□ -1.95
HOXA9P31269 AC009237.15-201ENST00000610252 501 ntBASIC2.84□□□□□ -1.95
HOXA9P31269 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
HOXA9P31269 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.84□□□□□ -1.95
HOXA9P31269 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.84□□□□□ -1.95
HOXA9P31269 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.84□□□□□ -1.95
HOXA9P31269 SUCLA2P2-201ENST00000417269 1309 ntBASIC2.84□□□□□ -1.96
HOXA9P31269 MTND5P31-201ENST00000419366 1374 ntBASIC2.84□□□□□ -1.96
HOXA9P31269 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
HOXA9P31269 ZNF734P-201ENST00000419494 1534 ntBASIC2.83□□□□□ -1.96
HOXA9P31269 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
HOXA9P31269 RNU6-263P-201ENST00000363811 107 ntBASIC2.83□□□□□ -1.96
HOXA9P31269 RNU6-444P-201ENST00000383988 108 ntBASIC2.83□□□□□ -1.96
HOXA9P31269 AL079342.2-201ENST00000403367 482 ntBASIC2.83□□□□□ -1.96
HOXA9P31269 RNA5SP38-201ENST00000410750 119 ntBASIC2.83□□□□□ -1.96
HOXA9P31269 MTND4P3-201ENST00000417829 541 ntBASIC2.83□□□□□ -1.96
HOXA9P31269 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC2.83□□□□□ -1.96
HOXA9P31269 AL390023.1-201ENST00000428836 262 ntBASIC2.83□□□□□ -1.96
HOXA9P31269 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC2.83□□□□□ -1.96
HOXA9P31269 RPL31P54-201ENST00000429803 370 ntBASIC2.83□□□□□ -1.96
HOXA9P31269 GTF2IP3-201ENST00000433887 494 ntBASIC2.83□□□□□ -1.96
HOXA9P31269 snoU109.3-201ENST00000459477 145 ntBASIC2.83□□□□□ -1.96
HOXA9P31269 AC104164.3-201ENST00000467363 1258 ntBASIC2.83□□□□□ -1.96
HOXA9P31269 RPL21P131-201ENST00000497298 483 ntBASIC2.83□□□□□ -1.96
HOXA9P31269 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
HOXA9P31269 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
HOXA9P31269 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
HOXA9P31269 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
HOXA9P31269 AL391156.1-201ENST00000554965 554 ntBASIC2.83□□□□□ -1.96
HOXA9P31269 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC2.83□□□□□ -1.96
HOXA9P31269 MIR3124-201ENST00000582636 67 ntBASIC2.83□□□□□ -1.96
HOXA9P31269 AC083760.1-201ENST00000589621 670 ntBASIC2.83□□□□□ -1.96
HOXA9P31269 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.83□□□□□ -1.96
HOXA9P31269 DPRXP5-201ENST00000604662 539 ntBASIC2.83□□□□□ -1.96
HOXA9P31269 AC112220.2-201ENST00000605513 533 ntBASIC2.83□□□□□ -1.96
HOXA9P31269 AL592148.2-201ENST00000612210 372 ntBASIC2.83□□□□□ -1.96
HOXA9P31269 MIR6076-201ENST00000617521 113 ntBASIC2.83□□□□□ -1.96
HOXA9P31269 AL355493.4-201ENST00000618530 292 ntBASIC2.83□□□□□ -1.96
HOXA9P31269 AL590808.1-201ENST00000618696 141 ntBASIC2.83□□□□□ -1.96
HOXA9P31269 AC098679.5-201ENST00000624394 571 ntBASIC2.83□□□□□ -1.96
HOXA9P31269 AP003485.1-201ENST00000625093 753 ntBASIC2.83□□□□□ -1.96
HOXA9P31269 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC2.83□□□□□ -1.96
HOXA9P31269 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
HOXA9P31269 SNORD56.5-201ENST00000364281 72 ntBASIC2.82□□□□□ -1.96
HOXA9P31269 RNU6-707P-201ENST00000364647 95 ntBASIC2.82□□□□□ -1.96
HOXA9P31269 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC2.82□□□□□ -1.96
HOXA9P31269 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC2.82□□□□□ -1.96
HOXA9P31269 RNU6-441P-201ENST00000384545 106 ntBASIC2.82□□□□□ -1.96
HOXA9P31269 RSL24D1P4-201ENST00000400938 484 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms