Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.7□□□□□ -1.5
RXRBP28702 GPR143P-201ENST00000434155 205 ntBASIC5.7□□□□□ -1.5
RXRBP28702 MTND3P16-201ENST00000452205 344 ntBASIC5.7□□□□□ -1.5
RXRBP28702 AL356010.1-201ENST00000456364 102 ntBASIC5.7□□□□□ -1.5
RXRBP28702 AC007547.1-201ENST00000462177 490 ntBASIC5.7□□□□□ -1.5
RXRBP28702 RPL23AP71-201ENST00000470966 469 ntBASIC5.7□□□□□ -1.5
RXRBP28702 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC5.7□□□□□ -1.5
RXRBP28702 TMEM248P1-201ENST00000510579 951 ntBASIC5.7□□□□□ -1.5
RXRBP28702 AC104986.1-201ENST00000517978 436 ntBASIC5.7□□□□□ -1.5
RXRBP28702 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.7□□□□□ -1.5
RXRBP28702 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC5.7□□□□□ -1.5
RXRBP28702 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.7□□□□□ -1.5
RXRBP28702 BNIP3P6-201ENST00000549284 499 ntBASIC5.7□□□□□ -1.5
RXRBP28702 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.7□□□□□ -1.5
RXRBP28702 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.7□□□□□ -1.5
RXRBP28702 AC022884.3-201ENST00000579571 248 ntBASIC5.7□□□□□ -1.5
RXRBP28702 AP001330.4-201ENST00000604350 154 ntBASIC5.7□□□□□ -1.5
RXRBP28702 NUTF2P8-201ENST00000604593 363 ntBASIC5.7□□□□□ -1.5
RXRBP28702 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC5.7□□□□□ -1.5
RXRBP28702 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
RXRBP28702 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RXRBP28702 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
RXRBP28702 AC097504.1-201ENST00000515103 2415 ntBASIC5.7□□□□□ -1.5
RXRBP28702 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RXRBP28702 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
RXRBP28702 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
RXRBP28702 MTND4P1-201ENST00000457501 1466 ntBASIC5.7□□□□□ -1.5
RXRBP28702 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RXRBP28702 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
RXRBP28702 AC233263.6-201ENST00000631132 1963 ntBASIC5.69□□□□□ -1.5
RXRBP28702 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
RXRBP28702 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5.69□□□□□ -1.5
RXRBP28702 MARK2P15-201ENST00000432204 2186 ntBASIC5.69□□□□□ -1.5
RXRBP28702 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
RXRBP28702 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
RXRBP28702 ACEA_U3.1-201ENST00000363057 217 ntBASIC5.69□□□□□ -1.5
RXRBP28702 MDM4-202ENST00000367180 547 ntTSL 3 BASIC5.69□□□□□ -1.5
RXRBP28702 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RXRBP28702 AL359634.1-202ENST00000404721 284 ntBASIC5.69□□□□□ -1.5
RXRBP28702 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC5.69□□□□□ -1.5
RXRBP28702 AL035551.1-201ENST00000446931 348 ntBASIC5.69□□□□□ -1.5
RXRBP28702 AC073415.1-201ENST00000449240 153 ntBASIC5.69□□□□□ -1.5
RXRBP28702 APOOP2-201ENST00000461561 539 ntBASIC5.69□□□□□ -1.5
RXRBP28702 AL163973.1-201ENST00000484753 577 ntBASIC5.69□□□□□ -1.5
RXRBP28702 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC5.69□□□□□ -1.5
RXRBP28702 Y_RNA.665-201ENST00000516177 98 ntBASIC5.69□□□□□ -1.5
RXRBP28702 RN7SKP57-201ENST00000517248 293 ntBASIC5.69□□□□□ -1.5
RXRBP28702 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC5.69□□□□□ -1.5
RXRBP28702 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC5.69□□□□□ -1.5
RXRBP28702 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC5.69□□□□□ -1.5
RXRBP28702 HSPE1P3-201ENST00000559254 309 ntBASIC5.69□□□□□ -1.5
RXRBP28702 APOOP1-201ENST00000604695 592 ntBASIC5.69□□□□□ -1.5
RXRBP28702 AL354984.3-201ENST00000604803 325 ntBASIC5.69□□□□□ -1.5
RXRBP28702 U3.45-201ENST00000607547 219 ntBASIC5.69□□□□□ -1.5
RXRBP28702 OR10AB1P-201ENST00000609613 938 ntBASIC5.69□□□□□ -1.5
RXRBP28702 AC244517.12-201ENST00000623581 663 ntBASIC5.69□□□□□ -1.5
RXRBP28702 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC5.69□□□□□ -1.5
RXRBP28702 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.69□□□□□ -1.5
RXRBP28702 KPNA2P2-201ENST00000419546 1489 ntBASIC5.69□□□□□ -1.5
RXRBP28702 THUMPD3P1-201ENST00000506556 1480 ntBASIC5.69□□□□□ -1.5
RXRBP28702 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.69□□□□□ -1.5
RXRBP28702 ASNSP3-201ENST00000451989 1306 ntBASIC5.69□□□□□ -1.5
RXRBP28702 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RXRBP28702 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RXRBP28702 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.68□□□□□ -1.5
RXRBP28702 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
RXRBP28702 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.68□□□□□ -1.5
RXRBP28702 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.68□□□□□ -1.5
RXRBP28702 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
RXRBP28702 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.68□□□□□ -1.5
RXRBP28702 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
RXRBP28702 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC5.68□□□□□ -1.5
RXRBP28702 RNU6-996P-201ENST00000365438 107 ntBASIC5.68□□□□□ -1.5
RXRBP28702 RNU6-1106P-201ENST00000390845 107 ntBASIC5.68□□□□□ -1.5
RXRBP28702 CD3D-202ENST00000392884 476 ntTSL 2 BASIC5.68□□□□□ -1.5
RXRBP28702 RN7SKP284-201ENST00000411002 343 ntBASIC5.68□□□□□ -1.5
RXRBP28702 RNU6-1304P-201ENST00000411374 106 ntBASIC5.68□□□□□ -1.5
RXRBP28702 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC5.68□□□□□ -1.5
RXRBP28702 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.68□□□□□ -1.5
RXRBP28702 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC5.68□□□□□ -1.5
RXRBP28702 RPS15AP1-201ENST00000457423 391 ntBASIC5.68□□□□□ -1.5
RXRBP28702 RPS4XP10-201ENST00000465034 731 ntBASIC5.68□□□□□ -1.5
RXRBP28702 AL136126.1-201ENST00000473603 402 ntBASIC5.68□□□□□ -1.5
RXRBP28702 LEF1-218ENST00000512172 598 ntTSL 2 BASIC5.68□□□□□ -1.5
RXRBP28702 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.68□□□□□ -1.5
RXRBP28702 SUMO2P20-201ENST00000520803 283 ntBASIC5.68□□□□□ -1.5
RXRBP28702 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC5.68□□□□□ -1.5
RXRBP28702 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC5.68□□□□□ -1.5
RXRBP28702 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RXRBP28702 APOOP3-201ENST00000536787 586 ntBASIC5.68□□□□□ -1.5
RXRBP28702 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.68□□□□□ -1.5
RXRBP28702 AL358913.1-201ENST00000554342 121 ntBASIC5.68□□□□□ -1.5
RXRBP28702 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC5.68□□□□□ -1.5
RXRBP28702 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.68□□□□□ -1.5
RXRBP28702 BPIFA4P-203ENST00000603168 689 ntBASIC5.68□□□□□ -1.5
RXRBP28702 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.68□□□□□ -1.5
RXRBP28702 AC092807.2-201ENST00000609367 243 ntBASIC5.68□□□□□ -1.5
RXRBP28702 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC5.68□□□□□ -1.5
RXRBP28702 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC5.68□□□□□ -1.5
RXRBP28702 AC022031.1-201ENST00000585985 2593 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms