Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CDH3P22223 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC3.43□□□□□ -1.86
CDH3P22223 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.43□□□□□ -1.86
CDH3P22223 CCNG2P1-201ENST00000549521 1000 ntBASIC3.43□□□□□ -1.86
CDH3P22223 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.43□□□□□ -1.86
CDH3P22223 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.43□□□□□ -1.86
CDH3P22223 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.43□□□□□ -1.86
CDH3P22223 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.43□□□□□ -1.86
CDH3P22223 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.43□□□□□ -1.86
CDH3P22223 AC012435.1-202ENST00000568772 240 ntBASIC3.43□□□□□ -1.86
CDH3P22223 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.43□□□□□ -1.86
CDH3P22223 MIR3915-201ENST00000578518 97 ntBASIC3.43□□□□□ -1.86
CDH3P22223 AC013444.2-201ENST00000603317 787 ntBASIC3.43□□□□□ -1.86
CDH3P22223 AC090186.1-201ENST00000605991 572 ntBASIC3.43□□□□□ -1.86
CDH3P22223 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.43□□□□□ -1.86
CDH3P22223 AL596245.1-201ENST00000618994 362 ntBASIC3.43□□□□□ -1.86
CDH3P22223 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
CDH3P22223 AC007656.2-201ENST00000624902 4547 ntBASIC3.43□□□□□ -1.86
CDH3P22223 AC058791.1-201ENST00000608412 3198 ntBASIC3.43□□□□□ -1.86
CDH3P22223 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.43□□□□□ -1.86
CDH3P22223 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CDH3P22223 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
CDH3P22223 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
CDH3P22223 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.42□□□□□ -1.86
CDH3P22223 AL445523.1-201ENST00000451184 1362 ntBASIC3.42□□□□□ -1.86
CDH3P22223 MTND4P16-201ENST00000466108 1367 ntBASIC3.42□□□□□ -1.86
CDH3P22223 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CDH3P22223 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
CDH3P22223 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CDH3P22223 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CDH3P22223 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.42□□□□□ -1.86
CDH3P22223 SNORA63.1-201ENST00000362493 131 ntBASIC3.42□□□□□ -1.86
CDH3P22223 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CDH3P22223 SNORD116-2-201ENST00000384274 95 ntBASIC3.42□□□□□ -1.86
CDH3P22223 SNORD116-6-201ENST00000384711 96 ntBASIC3.42□□□□□ -1.86
CDH3P22223 SAR1AP2-201ENST00000392696 594 ntBASIC3.42□□□□□ -1.86
CDH3P22223 RPS3AP26-201ENST00000398259 784 ntBASIC3.42□□□□□ -1.86
CDH3P22223 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
CDH3P22223 AL591034.1-201ENST00000407447 340 ntBASIC3.42□□□□□ -1.86
CDH3P22223 RNU6-920P-201ENST00000410926 92 ntBASIC3.42□□□□□ -1.86
CDH3P22223 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.42□□□□□ -1.86
CDH3P22223 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.42□□□□□ -1.86
CDH3P22223 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.42□□□□□ -1.86
CDH3P22223 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CDH3P22223 DPPA2P1-201ENST00000428060 556 ntBASIC3.42□□□□□ -1.86
CDH3P22223 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.42□□□□□ -1.86
CDH3P22223 LARP1BP3-201ENST00000437229 869 ntBASIC3.42□□□□□ -1.86
CDH3P22223 RSU1P2-202ENST00000437884 485 ntBASIC3.42□□□□□ -1.86
CDH3P22223 SDCBPP1-201ENST00000440192 890 ntBASIC3.42□□□□□ -1.86
CDH3P22223 AL353691.1-201ENST00000451332 387 ntBASIC3.42□□□□□ -1.86
CDH3P22223 RPS27AP8-201ENST00000452665 445 ntBASIC3.42□□□□□ -1.86
CDH3P22223 RPS4XP10-201ENST00000465034 731 ntBASIC3.42□□□□□ -1.86
CDH3P22223 FAM172BP-201ENST00000487497 1089 ntBASIC3.42□□□□□ -1.86
CDH3P22223 OR2A20P-203ENST00000498397 1268 ntBASIC3.42□□□□□ -1.86
CDH3P22223 COX7A2P2-201ENST00000505291 250 ntBASIC3.42□□□□□ -1.86
CDH3P22223 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.42□□□□□ -1.86
CDH3P22223 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.42□□□□□ -1.86
CDH3P22223 SNORD59.2-201ENST00000516873 68 ntBASIC3.42□□□□□ -1.86
CDH3P22223 SNORA31.20-201ENST00000517111 133 ntBASIC3.42□□□□□ -1.86
CDH3P22223 RNA5SP380-201ENST00000517190 98 ntBASIC3.42□□□□□ -1.86
CDH3P22223 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.42□□□□□ -1.86
CDH3P22223 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.42□□□□□ -1.86
CDH3P22223 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CDH3P22223 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.42□□□□□ -1.86
CDH3P22223 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.42□□□□□ -1.86
CDH3P22223 AC097065.2-201ENST00000608159 533 ntBASIC3.42□□□□□ -1.86
CDH3P22223 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3.42□□□□□ -1.86
CDH3P22223 AC106028.5-201ENST00000610332 395 ntBASIC3.42□□□□□ -1.86
CDH3P22223 AC018755.4-201ENST00000619715 454 ntBASIC3.42□□□□□ -1.86
CDH3P22223 AL356266.1-201ENST00000623311 483 ntBASIC3.42□□□□□ -1.86
CDH3P22223 AC007494.3-201ENST00000624660 743 ntBASIC3.42□□□□□ -1.86
CDH3P22223 AC012321.1-201ENST00000561622 1588 ntBASIC3.42□□□□□ -1.86
CDH3P22223 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3.42□□□□□ -1.86
CDH3P22223 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.42□□□□□ -1.86
CDH3P22223 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CDH3P22223 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CDH3P22223 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.41□□□□□ -1.86
CDH3P22223 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CDH3P22223 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.41□□□□□ -1.86
CDH3P22223 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
CDH3P22223 RNU6-1249P-201ENST00000363237 111 ntBASIC3.41□□□□□ -1.86
CDH3P22223 SNORD46.1-201ENST00000364139 104 ntBASIC3.41□□□□□ -1.86
CDH3P22223 RNA5SP235-201ENST00000365411 114 ntBASIC3.41□□□□□ -1.86
CDH3P22223 SKINT1L-201ENST00000401057 817 ntBASIC3.41□□□□□ -1.86
CDH3P22223 AL354719.1-201ENST00000406535 843 ntBASIC3.41□□□□□ -1.86
CDH3P22223 RN7SKP266-201ENST00000410232 287 ntBASIC3.41□□□□□ -1.86
CDH3P22223 DBIP2-201ENST00000419076 262 ntBASIC3.41□□□□□ -1.86
CDH3P22223 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.41□□□□□ -1.86
CDH3P22223 AL445669.1-201ENST00000426743 755 ntBASIC3.41□□□□□ -1.86
CDH3P22223 AL390023.1-201ENST00000428836 262 ntBASIC3.41□□□□□ -1.86
CDH3P22223 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.41□□□□□ -1.86
CDH3P22223 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.41□□□□□ -1.86
CDH3P22223 ISCA1P2-201ENST00000438679 421 ntBASIC3.41□□□□□ -1.86
CDH3P22223 UBE2D3P4-201ENST00000441973 436 ntBASIC3.41□□□□□ -1.86
CDH3P22223 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.41□□□□□ -1.86
CDH3P22223 PRDX3P3-201ENST00000447765 522 ntBASIC3.41□□□□□ -1.86
CDH3P22223 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.41□□□□□ -1.86
CDH3P22223 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.41□□□□□ -1.86
CDH3P22223 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC3.41□□□□□ -1.86
CDH3P22223 AC023598.1-201ENST00000472521 361 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms