Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC1.55□□□□□ -2.16
CCL3L1P16619 AC073901.1-201ENST00000462471 408 ntBASIC1.55□□□□□ -2.16
CCL3L1P16619 AC104689.1-201ENST00000473356 768 ntBASIC1.55□□□□□ -2.16
CCL3L1P16619 AC017007.3-201ENST00000479865 435 ntBASIC1.55□□□□□ -2.16
CCL3L1P16619 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.55□□□□□ -2.16
CCL3L1P16619 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.55□□□□□ -2.16
CCL3L1P16619 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC1.55□□□□□ -2.16
CCL3L1P16619 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC1.55□□□□□ -2.16
CCL3L1P16619 AC110588.1-201ENST00000559699 137 ntBASIC1.55□□□□□ -2.16
CCL3L1P16619 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC1.55□□□□□ -2.16
CCL3L1P16619 OR4G1P-201ENST00000588632 938 ntBASIC1.55□□□□□ -2.16
CCL3L1P16619 AC008687.2-201ENST00000597865 520 ntBASIC1.55□□□□□ -2.16
CCL3L1P16619 VN1R74P-201ENST00000613259 503 ntBASIC1.55□□□□□ -2.16
CCL3L1P16619 AC011890.2-201ENST00000613393 294 ntBASIC1.55□□□□□ -2.16
CCL3L1P16619 AL138880.2-201ENST00000616214 239 ntBASIC1.55□□□□□ -2.16
CCL3L1P16619 AC005858.4-201ENST00000623191 700 ntBASIC1.55□□□□□ -2.16
CCL3L1P16619 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC1.55□□□□□ -2.16
CCL3L1P16619 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.55□□□□□ -2.16
CCL3L1P16619 MAPK10-266ENST00000641066 6555 ntBASIC1.55□□□□□ -2.16
CCL3L1P16619 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
CCL3L1P16619 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
CCL3L1P16619 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
CCL3L1P16619 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.55□□□□□ -2.16
CCL3L1P16619 NSRP1P1-201ENST00000444067 1693 ntBASIC1.55□□□□□ -2.16
CCL3L1P16619 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.55□□□□□ -2.16
CCL3L1P16619 AC092881.1-201ENST00000638218 2733 ntBASIC1.54□□□□□ -2.16
CCL3L1P16619 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
CCL3L1P16619 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
CCL3L1P16619 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
CCL3L1P16619 RNU6-452P-201ENST00000384406 107 ntBASIC1.54□□□□□ -2.16
CCL3L1P16619 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
CCL3L1P16619 AL513331.1-201ENST00000411908 397 ntBASIC1.54□□□□□ -2.16
CCL3L1P16619 AC096632.1-201ENST00000427395 310 ntBASIC1.54□□□□□ -2.16
CCL3L1P16619 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.54□□□□□ -2.16
CCL3L1P16619 AL513321.1-201ENST00000441175 761 ntBASIC1.54□□□□□ -2.16
CCL3L1P16619 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC1.54□□□□□ -2.16
CCL3L1P16619 RPL23AP23-201ENST00000452590 471 ntBASIC1.54□□□□□ -2.16
CCL3L1P16619 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.54□□□□□ -2.16
CCL3L1P16619 AC007182.2-201ENST00000489251 402 ntBASIC1.54□□□□□ -2.16
CCL3L1P16619 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC1.54□□□□□ -2.16
CCL3L1P16619 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.54□□□□□ -2.16
CCL3L1P16619 AC133963.2-201ENST00000513686 578 ntBASIC1.54□□□□□ -2.16
CCL3L1P16619 RNU1-104P-201ENST00000517280 175 ntBASIC1.54□□□□□ -2.16
CCL3L1P16619 AC067904.2-201ENST00000517322 1283 ntBASIC1.54□□□□□ -2.16
CCL3L1P16619 SMILR-201ENST00000533992 553 ntTSL 4 BASIC1.54□□□□□ -2.16
CCL3L1P16619 AC068790.3-201ENST00000602988 553 ntBASIC1.54□□□□□ -2.16
CCL3L1P16619 AC135178.6-201ENST00000605314 398 ntBASIC1.54□□□□□ -2.16
CCL3L1P16619 AC093673.2-201ENST00000609674 331 ntBASIC1.54□□□□□ -2.16
CCL3L1P16619 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC1.54□□□□□ -2.16
CCL3L1P16619 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.54□□□□□ -2.16
CCL3L1P16619 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
CCL3L1P16619 RNU6-263P-201ENST00000363811 107 ntBASIC1.53□□□□□ -2.16
CCL3L1P16619 RNU6-31P-201ENST00000384388 108 ntBASIC1.53□□□□□ -2.16
CCL3L1P16619 SNORA51.11-201ENST00000384442 131 ntBASIC1.53□□□□□ -2.16
CCL3L1P16619 RPS4XP3-201ENST00000398541 413 ntBASIC1.53□□□□□ -2.16
CCL3L1P16619 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
CCL3L1P16619 MTATP6P31-201ENST00000406985 692 ntBASIC1.53□□□□□ -2.16
CCL3L1P16619 AC096533.1-201ENST00000411645 353 ntBASIC1.53□□□□□ -2.16
CCL3L1P16619 HMGB3P2-201ENST00000411913 584 ntBASIC1.53□□□□□ -2.16
CCL3L1P16619 AC008173.1-201ENST00000418901 264 ntBASIC1.53□□□□□ -2.16
CCL3L1P16619 PABPC1P9-201ENST00000426076 1612 ntBASIC1.53□□□□□ -2.16
CCL3L1P16619 HMGN2P3-201ENST00000433603 273 ntBASIC1.53□□□□□ -2.16
CCL3L1P16619 HMGN2P5-201ENST00000436882 273 ntBASIC1.53□□□□□ -2.16
CCL3L1P16619 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC1.53□□□□□ -2.16
CCL3L1P16619 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.53□□□□□ -2.16
CCL3L1P16619 MTCYBP34-201ENST00000439552 670 ntBASIC1.53□□□□□ -2.16
CCL3L1P16619 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC1.53□□□□□ -2.16
CCL3L1P16619 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.53□□□□□ -2.16
CCL3L1P16619 SETP11-201ENST00000473027 690 ntBASIC1.53□□□□□ -2.16
CCL3L1P16619 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.53□□□□□ -2.16
CCL3L1P16619 AC079804.2-201ENST00000490376 200 ntBASIC1.53□□□□□ -2.16
CCL3L1P16619 AC135721.1-201ENST00000497954 479 ntBASIC1.53□□□□□ -2.16
CCL3L1P16619 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC1.53□□□□□ -2.16
CCL3L1P16619 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.53□□□□□ -2.16
CCL3L1P16619 RNA5SP364-201ENST00000516938 78 ntBASIC1.53□□□□□ -2.16
CCL3L1P16619 IGKV2D-36-201ENST00000518643 226 ntBASIC1.53□□□□□ -2.16
CCL3L1P16619 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC1.53□□□□□ -2.16
CCL3L1P16619 AP000916.1-201ENST00000533869 835 ntBASIC1.53□□□□□ -2.16
CCL3L1P16619 AP000873.5-201ENST00000533906 236 ntBASIC1.53□□□□□ -2.16
CCL3L1P16619 NOP56P3-201ENST00000549457 385 ntBASIC1.53□□□□□ -2.16
CCL3L1P16619 ISCA1P3-201ENST00000577104 373 ntBASIC1.53□□□□□ -2.16
CCL3L1P16619 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC1.53□□□□□ -2.16
CCL3L1P16619 RPP40P2-201ENST00000603596 712 ntBASIC1.53□□□□□ -2.16
CCL3L1P16619 AL590099.1-201ENST00000615276 138 ntBASIC1.53□□□□□ -2.16
CCL3L1P16619 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC1.53□□□□□ -2.17
CCL3L1P16619 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
CCL3L1P16619 AC010680.1-201ENST00000590024 3590 ntBASIC1.52□□□□□ -2.17
CCL3L1P16619 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
CCL3L1P16619 RNU6-1243P-201ENST00000364028 107 ntBASIC1.52□□□□□ -2.17
CCL3L1P16619 SNORA67.1-201ENST00000364749 141 ntBASIC1.52□□□□□ -2.17
CCL3L1P16619 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
CCL3L1P16619 MIR583-201ENST00000384846 75 ntBASIC1.52□□□□□ -2.17
CCL3L1P16619 TAS2R15P-201ENST00000390674 928 ntBASIC1.52□□□□□ -2.17
CCL3L1P16619 SNORA40.18-201ENST00000391200 128 ntBASIC1.52□□□□□ -2.17
CCL3L1P16619 SFR1P1-201ENST00000403720 688 ntBASIC1.52□□□□□ -2.17
CCL3L1P16619 MIR1289-2-201ENST00000408360 111 ntBASIC1.52□□□□□ -2.17
CCL3L1P16619 MTCO3P12-201ENST00000416718 547 ntBASIC1.52□□□□□ -2.17
CCL3L1P16619 AC233981.1-201ENST00000423224 461 ntBASIC1.52□□□□□ -2.17
CCL3L1P16619 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.52□□□□□ -2.17
CCL3L1P16619 AC010095.1-201ENST00000443543 144 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms